| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,559,744 | A→G | 5.2% | A251A (GCT→GCC) | hisZ ← | ATP phosphoribosyltransferase regulatory subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,559,744 | 0 | A | G | 5.2% | 291.0 / 3.8 | 96 | A251A (GCT→GCC) | hisZ | ATP phosphoribosyltransferase regulatory subunit |
| Reads supporting (aligned to +/- strand): ref base A (48/43); new base G (3/2); total (51/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.46e-01 | |||||||||||
TATCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAGGTCGGCCGT > NC_002947/5559596‑5559893 | tatCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCa < 8:205989/149‑1 (MQ=255) atCGGCGGAGCGACCGCCCTGGGCGATCGAGTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCa < 8:382692/148‑1 (MQ=255) tcgtcgtcgCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGc < 3:223102/149‑1 (MQ=255) gtcgtAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGa < 3:366432/149‑1 (MQ=255) tcgtAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGAt > 8:218917/1‑149 (MQ=255) caatcGATCGCCCAGGGCGGTCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCg > 5:85938/5‑149 (MQ=255) gACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGc > 1:2712/1‑145 (MQ=255) gACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGc < 2:2712/145‑1 (MQ=255) gACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCcag > 5:65462/1‑148 (MQ=255) cGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAgg < 2:402811/149‑1 (MQ=255) cGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAgg > 5:421117/1‑149 (MQ=255) gCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGt > 4:399380/1‑149 (MQ=255) cgatcgatTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAgc > 8:205087/1‑149 (MQ=255) gatcgatTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCcag > 6:291273/1‑135 (MQ=255) gatcgatTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCcag < 5:291273/135‑1 (MQ=255) gatcgatTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAgcg > 5:266644/1‑149 (MQ=255) gatTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGcg‑ccgc < 7:218917/149‑1 (MQ=255) ccTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCAc > 1:93538/1‑149 (MQ=255) cTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACg > 4:307527/1‑149 (MQ=255) cTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCG‑CAGCACGc > 7:372214/1‑149 (MQ=255) gCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCTATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTg < 2:154309/148‑1 (MQ=255) gCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTg < 6:85938/148‑1 (MQ=255) ccTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGc < 1:162517/149‑1 (MQ=255) cTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGcc > 5:201409/1‑149 (MQ=255) tGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCg > 5:388326/1‑149 (MQ=255) ggCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCgg < 7:205087/149‑1 (MQ=255) gCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCGGCGATCGCCAGCAGGTCATc < 2:275185/124‑1 (MQ=255) gCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCGGCGATCGCCAGCAGGTCATc > 1:275185/1‑124 (MQ=255) cACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCCGGAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCggg > 1:106961/1‑149 (MQ=255) cACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCgggg > 2:93843/1‑149 (MQ=255) aCGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTg < 6:421349/141‑1 (MQ=255) aCGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGgc < 2:93538/149‑1 (MQ=255) aCGAACACGGCGAACACCACGCCCGTGTGGTAGGGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTg > 5:421349/1‑141 (MQ=255) acacGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGa > 5:300908/1‑149 (MQ=255) cacGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCG‑CAGCACGCTGGCCGGGGCGCGAcc < 8:372214/149‑1 (MQ=255) acGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGAcc < 6:421117/149‑1 (MQ=255) gCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAg < 6:388326/149‑1 (MQ=255) gCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAg < 3:399380/149‑1 (MQ=255) caccacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCa > 6:295985/1‑149 (MQ=255) accacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCAc > 1:178102/1‑149 (MQ=255) ccacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCca > 4:355421/1‑96 (MQ=255) ccacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCca < 3:355421/96‑1 (MQ=255) cacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCAcgc > 6:475/1‑149 (MQ=255) cacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCAcgc > 7:165833/1‑149 (MQ=255) cacGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCAcgc > 6:333548/1‑149 (MQ=255) cGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCgg < 2:106961/149‑1 (MQ=255) cGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCgg < 6:266644/149‑1 (MQ=255) cGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCgg < 8:165833/149‑1 (MQ=255) cGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCgg < 6:65462/149‑1 (MQ=255) gCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCggg > 2:224129/1‑149 (MQ=255) cccGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGc < 3:70014/149‑1 (MQ=255) tggtagtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCTAGGCGCACGCGGGCTTCAGc > 7:100577/1‑149 (MQ=255) gtagtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGcc < 1:93843/148‑1 (MQ=255) gtggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCAGGGTGATCAGCGATCGCCAGCAGGTCATACAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAg > 1:122338/1‑148 (MQ=255) tggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCggg > 7:64356/1‑114 (MQ=255) tggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCggg < 8:64356/114‑1 (MQ=255) tggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTAc > 4:215712/1‑149 (MQ=255) ggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCggg > 1:126188/1‑113 (MQ=255) ggtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCggg < 2:126188/113‑1 (MQ=255) gtaACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACtt > 5:8435/1‑149 (MQ=255) taACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTc < 1:224129/149‑1 (MQ=255) aCGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGac > 1:231061/1‑149 (MQ=255) gCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGc < 5:34476/100‑1 (MQ=255) gCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGc > 6:34476/1‑100 (MQ=255) gCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGacca < 5:333548/149‑1 (MQ=255) aGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCca < 3:201647/67‑1 (MQ=255) aGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCca > 4:201647/1‑67 (MQ=255) cc‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAg < 5:475/149‑1 (MQ=255) gAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCt > 2:119077/1‑149 (MQ=255) gTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCa > 3:181417/1‑118 (MQ=255) gTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCa < 4:181417/118‑1 (MQ=255) gTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGa > 1:124645/1‑149 (MQ=255) cGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGAc > 7:242855/1‑148 (MQ=255) gAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCC‑ACCACCACACAGCTCGACCAg > 3:119043/1‑149 (MQ=255) aaGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAg > 6:152351/1‑149 (MQ=255) aGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCGAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAgg < 5:295985/149‑1 (MQ=255) aGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAgg < 2:122338/149‑1 (MQ=255) tACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACcaca > 7:55695/1‑134 (MQ=255) tACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACcaca < 8:55695/134‑1 (MQ=255) aCAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGgcg > 3:107822/1‑149 (MQ=255) aGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCCCCACACAGCTCGACCAGGgcgcg > 6:252073/1‑149 (MQ=255) cAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCgcagca < 3:215712/149‑1 (MQ=255) gggTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGcc < 3:307527/149‑1 (MQ=255) gggTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGcc < 2:178102/149‑1 (MQ=255) ggTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGccc < 8:198001/149‑1 (MQ=255) gTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCa < 6:8435/149‑1 (MQ=255) gcgACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGgcgc < 3:358046/66‑1 (MQ=255) gcgACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGgcgc > 4:358046/1‑66 (MQ=255) gCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTCTCgg < 5:152351/149‑1 (MQ=255) tgctggCGATCGCTGATCGCCTGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCgg > 2:187988/5‑149 (MQ=255) tgctggCGATCGCTGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCgg > 1:329775/5‑149 (MQ=255) cA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCGTCCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCgg > 1:61684/1‑148 (MQ=255) cA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCgg > 6:33287/1‑147 (MQ=255) cA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCa < 6:300908/149‑1 (MQ=255) ctggCGATCGCTGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCgg < 2:329775/145‑1 (MQ=255) a‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAg > 2:118943/1‑149 (MQ=255) a‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAg > 6:103727/1‑149 (MQ=255) gCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAGGt < 6:201409/149‑1 (MQ=255) aGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCC‑ACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAGGTCGGCCGt < 4:119043/149‑1 (MQ=255) | TATCGTCGTAGCGACCGCCCTGGGCGATCGATTGGCCTTCGCCTGGCACGAACACGGCGAACACCACGCCCGTGTGGTAGTGGTAACCACGCAGCTCGCC‑GAGGTCGAAGTACAGCGGCAGGTCCGGGTAGCGCGACGCCA‑GGCGATCAGCGATCGCCAGCAGGTCATCCAGCG‑CCGCCAGCACGCTGGCCGGGGCGCGACCGAGGCGCACGCGGGCTTCAGCCAGTACTTCCCGACCACCACACAGCTCGACCAGGGCGCGCAGCATGCTGCCCAGGTCTTTCGGCAGGTCGGCCGT > NC_002947/5559596‑5559893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |