| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,827,962 | A→G | 5.1% | intergenic (+164/+35) | mtgA → / ← rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,827,962 | 0 | A | G | 5.1% | 300.7 / 3.7 | 100 | intergenic (+164/+35) | mtgA/rpoH | monofunctional biosynthetic peptidoglycan transglycosylase/RNA polymerase factor sigma‑32 |
| Reads supporting (aligned to +/- strand): ref base A (40/53); new base G (3/2); total (43/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.44e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
TCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTTCTCT > NC_002947/5827816‑5828108 | tCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAg < 1:275760/148‑1 (MQ=255) cgcgGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAgg < 5:253577/148‑1 (MQ=255) cgcgGGTAAACCCGCTCCTACGGGCAACCGCATCCACGGCCTCCTCGAGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAgg < 5:31045/148‑1 (MQ=255) gTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGc < 6:73515/149‑1 (MQ=255) aCCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCt > 3:365982/1‑149 (MQ=255) cccGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCtt < 5:358408/149‑1 (MQ=255) cTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCt < 5:336129/149‑1 (MQ=255) caaCGGGCAAACGCATCCCCGGCCTCCTCGCGGGCAAACCCGCCCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCtt < 4:237609/145‑1 (MQ=255) cTACTGGCAACCGCATCCCCGGCCTCCTCGCGGTCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATa < 7:392020/129‑1 (MQ=255) cTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCttt < 2:364669/148‑1 (MQ=255) cTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCttt > 3:237609/1‑148 (MQ=255) cTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTa > 2:60533/1‑149 (MQ=255) tACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCCCTCACCCCATAGGGCCAGCGGCTTTTCTTTa > 6:149844/1‑148 (MQ=255) cGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACaa < 4:365982/149‑1 (MQ=255) cAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCa < 5:218819/149‑1 (MQ=255) aaCCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttttgttt > 7:263629/1‑136 (MQ=37) aaCCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttttgttt < 8:263629/142‑7 (MQ=37) aaCCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAAcc > 6:408946/1‑146 (MQ=255) aaCCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAAcc > 5:200055/1‑146 (MQ=255) ctatcttCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCTGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGa < 3:24778/143‑1 (MQ=255) ccGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGTCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGAc < 6:220831/149‑1 (MQ=255) ccGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGAc < 3:333139/149‑1 (MQ=255) gCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTCCCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCCTAGGGCCAGCGGCGTTTCTGTACAAccccgcct > 3:245750/1‑143 (MQ=39) ccccGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AAt > 1:119219/1‑148 (MQ=255) ccccGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTAACAAACCaca > 4:24778/1‑140 (MQ=255) cccGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AAt > 8:212293/1‑147 (MQ=255) cccGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AAt > 7:77149/1‑147 (MQ=255) cccGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCa < 4:235222/149‑1 (MQ=255) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttt > 8:22377/1‑120 (MQ=38) tcctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTGGCCCTATGGGGTGAGCGGCttttt < 7:22377/121‑2 (MQ=37) ctcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGAt > 2:51338/1‑149 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGAt > 1:263520/1‑148 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGAt > 1:81753/1‑148 (MQ=255) tcGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGAt > 6:283081/1‑148 (MQ=255) tcGCGGACAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGAt > 6:223401/1‑148 (MQ=255) gcgGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCa < 1:60533/148‑1 (MQ=255) aaaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAg < 2:412119/132‑1 (MQ=255) aaaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAg > 1:412119/1‑132 (MQ=255) aaaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCa > 3:229517/1‑135 (MQ=255) aaaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCa < 4:229517/135‑1 (MQ=255) aaaCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCtt < 7:23420/149‑1 (MQ=255) aCCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGa < 4:179876/149‑1 (MQ=255) cgcgCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCACTGATCGCTGCCtgattga < 7:311799/149‑7 (MQ=39) gcgcCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCtt < 5:223401/149‑1 (MQ=255) cgcCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTg < 7:212293/149‑1 (MQ=255) cTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCACCGATCAGTGCCTTGACCTTGtt > 7:293197/1‑148 (MQ=255) cAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATc < 5:149844/149‑1 (MQ=255) gCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGc > 3:15302/1‑148 (MQ=255) gCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGc < 4:15302/148‑1 (MQ=255) cAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAt < 5:208467/149‑1 (MQ=255) aaCCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAAccga < 5:42662/103‑3 (MQ=255) aaCCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAAccga > 6:42662/1‑101 (MQ=255) aCCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAttc < 6:200055/149‑1 (MQ=255) cGCATCCGCTGTAGGAGCGGTCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATATGGCCAGAGGCTTTTCTTTACAACCCAGACTC‑AATCAGGGAGCGATCAGTGCCTTGACCTTGTTCATCGCAttctt < 5:283081/149‑1 (MQ=255) cGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCAttctt < 6:317266/149‑1 (MQ=255) gCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGc > 6:350853/1‑112 (MQ=255) cATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGtt > 4:58070/1‑135 (MQ=255) cATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGtt < 3:58070/135‑1 (MQ=255) cATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATtcttct > 4:286464/1‑149 (MQ=255) gTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTgg > 8:364906/1‑149 (MQ=255) gTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTgg > 3:132807/1‑149 (MQ=255) tAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAATAAGCCGCTCACCCCATTGGTCCAGCTGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGGCTTGACCTTGTTCATCGCATTCTTCTCCAACTgg < 6:358453/148‑1 (MQ=255) tAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGc < 7:364906/149‑1 (MQ=255) aGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGc > 1:204118/1‑148 (MQ=255) ggAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCg < 5:408946/148‑1 (MQ=255) ggCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGc < 2:263520/149‑1 (MQ=255) ccGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCa < 8:218976/95‑1 (MQ=255) ccGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCa > 7:218976/1‑95 (MQ=255) ccGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGt > 5:179137/1‑97 (MQ=255) ccGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGt < 6:179137/97‑1 (MQ=255) ccGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGcc > 1:185240/1‑148 (MQ=255) ccGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGcc > 6:211644/1‑148 (MQ=255) cgcgAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGAcc < 1:284778/105‑1 (MQ=255) cgcgAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGAcc > 2:284778/1‑105 (MQ=255) aaGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACg < 3:65251/149‑1 (MQ=255) gagGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCt < 1:51338/149‑1 (MQ=255) agGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTg < 5:98392/149‑1 (MQ=255) agGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTg < 2:81753/149‑1 (MQ=255) gCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTa > 5:283280/1‑149 (MQ=255) ccGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTA‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTAc < 2:185240/149‑1 (MQ=255) aaaGCCAAACAAAAACGCCGCTCACCCCATACGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTc < 4:245750/149‑1 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGc < 2:204118/149‑1 (MQ=255) gCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGc < 2:119219/149‑1 (MQ=255) aacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGCATACGCTCAGCCGATACGCTGTACTGGTCTGCCAGt > 3:330623/1‑149 (MQ=255) aacaaaAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGt < 1:249746/149‑1 (MQ=255) aaaaacTCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCa < 6:167543/149‑1 (MQ=255) aaaaaGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCAt < 3:286464/149‑1 (MQ=255) aaaaGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATg > 2:233209/1‑149 (MQ=255) aaGCCGCTGGCCCTATGGGGTGAGCGGCTTTTCTTTACAACCCAGACTCTAATCAGGCAGCGATCAGTGCCTTGACCCTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATg > 1:95381/1‑148 (MQ=255) ccGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCg > 4:232690/1‑83 (MQ=255) ccGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCg < 3:232690/83‑1 (MQ=255) cTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTg < 7:274938/67‑1 (MQ=255) cTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTg > 8:274938/1‑67 (MQ=255) gcACCCCATCGGGCCAGCGGCTTTTCTTTACACCCCAGACTC‑ACTCAGGCAGCGATCAGTGCCTTGACCTTGTGCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGc < 4:330623/148‑1 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATc > 8:12805/1‑76 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATc < 7:12805/76‑1 (MQ=255) aCCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGcc < 5:211644/148‑1 (MQ=255) cccATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGCTCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGACGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCTTGGCCTtc > 8:186365/1‑149 (MQ=255) cATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTtctc < 6:283280/149‑1 (MQ=255) aTAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTTctct > 6:423029/1‑149 (MQ=255) | TCGCGGGTAAACCCGCTCCTACGGGCAACCGCATCCCCGGCCTCCTCGCGGGCAAACCCGCGCCTACAGGCAACCGCATCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCGGCAAAGCCAAACAAAAAAGCCGCTCACCCCATAGGGCCAGCGGCTTTTCTTTACAACCCAGACTC‑AATCAGGCAGCGATCAGTGCCTTGACCTTGTTCATCGCATTCTTCTCCAACTGGCGAATACGCTCAGCCGATACGCTGTACTTGTCTGCCAGTTCATGCAGCGTGGCCTTCTCT > NC_002947/5827816‑5828108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |