| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,878,022 | A→G | 5.8% | intergenic (‑37/+54) | PP_5151 ← / ← PP_5152 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,878,022 | 0 | A | G | 5.8% | 252.6 / 3.0 | 85 | intergenic (‑37/+54) | PP_5151/PP_5152 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (41/39); new base G (3/2); total (44/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATGGCCACCCCTTCAGCCCGCGGAATG > NC_002947/5877879‑5878169 | agaTTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGaa < 7:118623/148‑1 (MQ=255) aTTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑gg < 5:274346/149‑1 (MQ=255) aTTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCAGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAtc > 4:67329/1‑147 (MQ=255) ttGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑gg < 4:303544/148‑1 (MQ=255) ttGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑gg < 4:116924/148‑1 (MQ=255) aaCCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTg > 6:398653/1‑148 (MQ=255) aCCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGaa < 1:315686/149‑1 (MQ=255) ccAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTg > 8:197704/1‑146 (MQ=255) cAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAg > 2:312466/1‑148 (MQ=255) aCGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGc > 2:321148/1‑149 (MQ=255) gCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCt > 8:248532/1‑148 (MQ=255) gCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCt > 8:11589/1‑148 (MQ=255) aaCAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATg > 1:347062/1‑148 (MQ=255) aGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAg > 3:146094/1‑149 (MQ=255) gCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCg > 5:93677/1‑149 (MQ=255) gAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑c > 5:377008/1‑149 (MQ=255) aCTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAgg > 5:19389/1‑149 (MQ=255) cTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGAAGCATAGGGACAGACTCGACACAAGGATGGCGATTCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAgg > 3:227012/1‑148 (MQ=255) tCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGc > 3:320901/1‑141 (MQ=255) tCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGc < 4:320901/141‑1 (MQ=255) tCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGc > 8:40944/1‑148 (MQ=255) cTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGCCGCATAGGGACAGACTCGACTCAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAAt > 7:55424/1‑149 (MQ=255) cTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAAt > 2:221077/1‑149 (MQ=255) tGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAAtt > 4:388164/1‑149 (MQ=255) tGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAAt > 2:322827/1‑148 (MQ=255) gCCCGGCCCAGCCATGCAGCAGCAGAGCAAGGGCTGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTaa < 1:373027/130‑1 (MQ=255) gCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTaa > 2:373027/1‑130 (MQ=255) cccGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAAtt < 5:350829/147‑1 (MQ=255) cccGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTc < 6:377008/148‑1 (MQ=255) ccGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCtg < 3:388164/149‑1 (MQ=255) ggCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCtgat < 7:11589/149‑1 (MQ=255) ggCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCtgat < 1:221077/149‑1 (MQ=255) cccAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTaa < 5:370331/124‑1 (MQ=255) cccAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTaa > 6:370331/1‑124 (MQ=255) cccAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCtgatga > 2:298416/1‑149 (MQ=255) cAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGAtgttgt < 7:248532/149‑1 (MQ=255) cAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGAtgttgt < 1:362481/149‑1 (MQ=255) cAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGAtgttgt < 1:312466/149‑1 (MQ=255) gcagcagcaGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGCCGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTAAg > 1:368979/1‑149 (MQ=255) gcagcagcaGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAg < 5:398653/149‑1 (MQ=255) agcagAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGCCAGACTCGACACAAGGATGGCGAATCTAATCGTGAAT‑GGCTAAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCtt > 1:330420/1‑149 (MQ=255) agcagAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCGTGAAT‑GGCTAAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCtt > 1:334990/1‑149 (MQ=255) gcagAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCtgat < 3:43072/132‑1 (MQ=255) gcagAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCtgat > 4:43072/1‑132 (MQ=255) agagAAATGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGTCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCttttt < 4:227012/149‑1 (MQ=255) gagCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAATCGGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCttttt < 1:322827/149‑1 (MQ=255) gagCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCttttt > 6:303218/1‑148 (MQ=255) cAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAATGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAAt < 2:347062/149‑1 (MQ=255) aaGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAAt < 5:303218/148‑1 (MQ=255) aaGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATc > 8:279992/1‑149 (MQ=255) gggCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGa < 1:298416/149‑1 (MQ=255) gggCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGa > 1:83631/1‑149 (MQ=255) ggCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGAt < 6:19389/149‑1 (MQ=255) aGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAg > 2:309493/1‑149 (MQ=255) aaCAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCttttt < 1:204848/132‑1 (MQ=255) aaCAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCttttt > 2:204848/1‑132 (MQ=255) aaCAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAgcg > 5:378857/1‑149 (MQ=255) aaCAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTATGATGATGTTGTCAGTTCTTTTAGAATCGATAGAAAAgcg > 5:372645/1‑149 (MQ=255) aCAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAgcgc < 2:18763/149‑1 (MQ=255) aGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCgg < 1:321148/149‑1 (MQ=255) ggCCAACAAAACGACGCATAGGGACAGACTCGACCCAAGGATCGCGAATCTAATCATCAAT‑GCCTCAAGCAAAGCTTAATCCAAGCGT‑CAGTCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTg < 8:55424/149‑1 (MQ=255) gCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAACGCGCCGGCTCGCTGa < 7:279992/149‑1 (MQ=255) aaCAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCa < 6:378857/149‑1 (MQ=255) aaCAAAACGACGCATAGGGACAGACTAGACACAAGTATGGAGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCa < 6:372645/149‑1 (MQ=255) aaaaCGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGa < 5:427240/121‑1 (MQ=255) aaaaCGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGa > 6:427240/1‑121 (MQ=255) aaCGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTa > 4:347826/1‑148 (MQ=255) cgacgCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACaa < 3:67329/149‑1 (MQ=255) aagCATAGGTACAGAATCTACACAAGGATGGAGAATCTAATCATGAAT‑GTCTTAAGCAAAGCTTAATGCAAGCGT‑CAGTCAATTCTGATGATTTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCAGGCTCGCTGACAATGTACAAGt < 7:340063/147‑1 (MQ=255) cgCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGtt < 7:197704/149‑1 (MQ=255) gCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTg > 1:238095/1‑149 (MQ=255) aTAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGc < 2:194085/130‑1 (MQ=255) aTAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGcc > 1:2280/1‑149 (MQ=255) gACAGACTCGACACAAGGATGGCGAATCTAATCGTGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTgt > 7:330350/1‑149 (MQ=255) aCAGACTCGACACAAGGATTGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTc < 7:360583/93‑1 (MQ=255) aCAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTc > 8:360583/1‑93 (MQ=255) aCAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTgtc < 4:146094/149‑1 (MQ=255) gACACAAGGATGGCGAATCTAATCGTGAAT‑GGCTAAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATg < 2:334990/148‑1 (MQ=255) gACACAAGGATGGCGAATCTAATCGTGAAT‑GGCTAAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATg < 2:330420/148‑1 (MQ=255) gACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATg < 3:347826/148‑1 (MQ=255) acacAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATGGc > 2:376416/1‑149 (MQ=255) acaAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATGGCCa > 1:133527/1‑149 (MQ=255) ggCGAATCTAAACATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGTGCAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATGGCCACCCCtt > 1:90425/1‑148 (MQ=255) gCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATGGCCACCCCTTCAg > 6:203907/1‑149 (MQ=255) gAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATGGCCACCCCTTCAGcc > 1:64158/1‑149 (MQ=255) aTGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATGGCCACCCCTTCAGCCCGCGGAATg < 1:376416/148‑1 (MQ=255) | AGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAAT‑GGCTGAAGCAAAGCTTAATGCAAGCGT‑CAGGCAATTCTGATGATGTTGTCAGTTCTTTTTGAATCGATAGAAAAGCGCCGGCTCGCTGACCATGTACAAGTTGCCCCTGTCGTCCATGGCCACCCCTTCAGCCCGCGGAATG > NC_002947/5877879‑5878169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |