| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,016,879 | C→T | 5.3% | intergenic (‑195/+32) | PP_5728 ← / ← PP_5267 | rhs repeat‑associated core domain‑containing protein/cytochrome c5 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,016,879 | 0 | C | T | 5.3% | 357.2 / 4.9 | 113 | intergenic (‑195/+32) | PP_5728/PP_5267 | rhs repeat‑associated core domain‑containing protein/cytochrome c5 |
| Reads supporting (aligned to +/- strand): ref base C (49/58); new base T (3/3); total (52/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
AAATAGAACTGGTAAAAATGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGC > NC_002947/6016735‑6017023 | aaaTAGAACTGGTAAAAATGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAAcg > 8:109478/1‑149 (MQ=255) tAGAACTGGTAAAAATGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAAcggcg > 1:189020/1‑149 (MQ=255) gTAAAAATGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTTGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCAt < 4:358409/149‑1 (MQ=255) gTAAAAATGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCAt > 8:254264/1‑149 (MQ=255) gTAAAAATGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGGGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCGTTGATGGCGGGctttg < 3:327582/148‑5 (MQ=255) tAAAAATGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATg > 8:156847/1‑149 (MQ=255) aaTGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAAt < 3:180927/149‑1 (MQ=255) tGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAAtt > 2:284087/1‑148 (MQ=255) tAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAAcggcg > 1:283950/1‑131 (MQ=255) tAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAAcggcg < 2:283950/131‑1 (MQ=255) gTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTTCTGTACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCt < 5:297104/148‑1 (MQ=255) tctcATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCGTTGATGGCGGGct > 6:180911/1‑130 (MQ=255) tctcATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCGTTGATGGCGGGct < 5:180911/131‑2 (MQ=255) ctcATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTa > 2:310063/1‑148 (MQ=255) cATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAg < 5:419436/141‑1 (MQ=255) cATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAg > 6:419436/1‑141 (MQ=255) cATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTaaa > 7:156505/1‑148 (MQ=255) aTGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCAGTGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTaaa > 1:285119/1‑148 (MQ=255) ggAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAAt > 6:308437/1‑146 (MQ=255) ggAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAAt < 5:308437/146‑1 (MQ=255) ccaaTCGGGCTGAGCCTGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTc < 4:381815/125‑1 (MQ=255) ccaaTCGGGCTGAGCCTGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTc > 3:381815/3‑127 (MQ=255) gtaTCATGCTCAGCCCTCTTGGAGCTTCTGGATTCCTCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTGATGCAATTCAGCTGTAAATcac < 7:260890/146‑1 (MQ=255) gAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATcaca < 1:316063/149‑1 (MQ=255) aaTCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACaa < 7:254264/149‑1 (MQ=255) aTCAGGCTCAGCCCGATTGGACCTTCTGGAGACATCCA‑TGGACATGGCTCAAGCGGGATGGTTGCCTGTCCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCAACAACGCCGGGCCTCATGCAATTCACCTGTAAAACACAAc > 2:219207/1‑149 (MQ=255) gCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAAtt < 8:158887/127‑1 (MQ=255) gCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAAtt > 7:158887/1‑127 (MQ=255) gCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGa > 5:373163/1‑149 (MQ=255) gCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACAttt < 7:109478/149‑1 (MQ=255) ccGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTc > 2:397851/1‑149 (MQ=255) cGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCt < 1:310063/149‑1 (MQ=255) gATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCtt < 8:202742/149‑1 (MQ=255) ggAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGAt < 7:117927/148‑1 (MQ=255) gAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCt > 8:250432/1‑118 (MQ=255) gAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCt < 7:250432/118‑1 (MQ=255) gCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTc > 5:90521/1‑140 (MQ=255) gCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTc < 6:90521/140‑1 (MQ=255) tCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCt > 7:21248/1‑149 (MQ=255) ggAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTc > 1:205691/1‑134 (MQ=255) ggAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTc < 2:205691/134‑1 (MQ=255) gagaCATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCttt < 5:258082/147‑1 (MQ=255) gagaCATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCa < 7:156847/149‑1 (MQ=255) agaCATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAg > 2:79787/1‑149 (MQ=255) aTCCA‑TGGACATGGCTGTAGCGGGTTGGTTTCCTGTGCTTGTCCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGTACATTTTCt < 2:313967/129‑1 (MQ=255) aTCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCt > 6:8194/1‑149 (MQ=255) aTCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCt > 7:16104/1‑149 (MQ=255) cA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTc < 1:79787/148‑1 (MQ=255) cA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCa > 7:289792/1‑149 (MQ=255) cA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCa > 5:53066/1‑149 (MQ=255) gACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATcc < 5:8194/148‑1 (MQ=255) aCATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGa < 3:196858/149‑1 (MQ=255) aCATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGa < 4:341417/149‑1 (MQ=255) aCATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGa < 6:350237/149‑1 (MQ=255) cATGGGTCTAGCGGGTGGGTTGCCTGTGCTGGACCTTTGTCGGGCACCACAAAATCAAAGCCCGCCATCAAGGGCGGGCCTCATGCATTTCTGCTGTAAATCACAACCGGGACATTTTCTTGGTCGCCCCTTTCAGGTCTTCATCCGAg < 1:219207/149‑1 (MQ=255) aTGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAg > 2:402855/1‑148 (MQ=255) aTGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAg < 1:402855/148‑1 (MQ=255) aTGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAg > 6:198353/1‑148 (MQ=255) ggCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATcc < 3:298567/143‑1 (MQ=255) ggCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATcc > 4:298567/1‑143 (MQ=255) gCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGt < 8:289792/149‑1 (MQ=255) ctctAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTc > 7:225050/1‑149 (MQ=255) tAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCt < 8:225050/147‑1 (MQ=255) gCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGca < 6:376353/148‑1 (MQ=255) gCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGc < 1:397851/147‑1 (MQ=255) gCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCA‑GTCTTCATCCGAGCAGTCTGcac < 7:259778/148‑1 (MQ=255) gttgCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTACACAGGTGcc < 2:285119/148‑1 (MQ=255) gCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCt < 5:389192/74‑1 (MQ=255) gCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCt > 6:389192/1‑74 (MQ=255) cTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTgg > 2:380301/1‑149 (MQ=255) tgtgCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTggc > 2:143255/1‑149 (MQ=255) tgtgCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTggc > 4:48300/1‑149 (MQ=255) gtgCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTggcg > 8:289301/1‑149 (MQ=255) tGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCAt > 2:346646/1‑149 (MQ=255) cTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCtt > 4:308637/1‑87 (MQ=255) cTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCtt < 3:308637/87‑1 (MQ=255) tctcGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGtt < 1:380301/147‑1 (MQ=255) ctcGGGCAGCAGAAAAACAAAGCACGCCATCATCGGCGGGACTCATTCAATTCAGCTTTATATCACAAGCTGTACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTATGCACAGGTGCCATTTGGCGGGATGGCGTTGa < 8:156505/148‑1 (MQ=255) ctcGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGa < 5:277461/148‑1 (MQ=255) cGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATAc > 8:213020/1‑149 (MQ=255) gggCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGAt < 1:410182/146‑1 (MQ=255) gggCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATa < 5:198353/147‑1 (MQ=255) gggCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATAc < 2:189020/148‑1 (MQ=255) acaAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGGTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCg > 1:288411/1‑134 (MQ=255) acaAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCg < 2:288411/134‑1 (MQ=255) aaaaaCAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGc > 1:355366/1‑149 (MQ=255) aaaaaCAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGc > 1:194197/1‑149 (MQ=255) aaCAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCtt < 6:373163/149‑1 (MQ=255) atgaggCCCGCCGTTGATGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTg > 5:54663/6‑149 (MQ=255) atgaggCCCGCCGTTGATGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTg > 1:366069/6‑149 (MQ=255) cAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCTGCTGTAAAGCACAACCCGGAGATTTTCTTGATCGCCCCTTTCAGGTCTTCCTCCGAGCCGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTAGATACCAGTAATGGCCTTgg < 5:355030/149‑1 (MQ=255) cAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTgg < 3:48300/149‑1 (MQ=255) aaaGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGca < 7:274809/102‑1 (MQ=255) aaaGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGca > 8:274809/1‑102 (MQ=255) gCCCGCCGTTGATGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAg < 2:366069/149‑1 (MQ=255) ccGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGa > 5:232540/1‑149 (MQ=255) ccGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAATAATGGCCTTGGCCAGGa > 6:378259/1‑149 (MQ=255) ccATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTg > 7:44902/1‑92 (MQ=255) ccATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGc > 7:63810/1‑149 (MQ=255) cATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGc > 6:396039/1‑148 (MQ=255) | AAATAGAACTGGTAAAAATGCTAGTTCTCATGGAATCAGGCTCAGCCCGATTGGAGCTTCTGGAGACATCCA‑TGGACATGGCTCTAGCGGGTTGGTTGCCTGTGCTGGACCTTTCTCGGGCACCACAAAAACAAAGCCCGCCATCAACGGCGGGCCTCATGCAATTCAGCTGTAAATCACAACCCGGACATTTTCTTGATCGCCCCTTTCAGGTCTTCATCCGAGCAGTCTGCACAGGTGCCCTTTGGCGGCATGGCGTTGATACCAGTAATGGCCTTGGCCAGGATGC > NC_002947/6016735‑6017023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |