| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,079,461 | G→T | 5.7% | intergenic (‑236/‑126) | PP_5330 ← / → PP_5331 | MFS transporter/acyl‑CoA thioesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,079,461 | 0 | G | T | 5.7% | 254.5 / 3.9 | 79 | intergenic (‑236/‑126) | PP_5330/PP_5331 | MFS transporter/acyl‑CoA thioesterase |
| Reads supporting (aligned to +/- strand): ref base G (35/39); new base T (3/2); total (38/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01 | |||||||||||
ACGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACAAGA > NC_002947/6079314‑6079606 | aCGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGt > 6:388116/1‑149 (MQ=255)aCGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CACCGGTCACTATTGTCAGGCGGt > 3:337421/1‑149 (MQ=255) gCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGttt < 6:103633/149‑1 (MQ=255) aaaGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTc < 5:385730/146‑1 (MQ=255) aaaGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTc > 6:385730/1‑146 (MQ=255) aTACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTCTGCGAAAC‑CGCCTGACAATAGTGACCGGCGTTTTCGCacaacat < 1:138902/149‑7 (MQ=37) aaaaTCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTccc > 5:1157/1‑148 (MQ=255) acaGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGgccgcc < 7:90255/149‑1 (MQ=255) tatTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGt > 4:151667/1‑148 (MQ=255) tGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGa < 6:278883/149‑1 (MQ=255) tGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATc > 5:399935/1‑149 (MQ=255) cgcgGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCg < 6:1157/148‑1 (MQ=255) ggcggcgtcgCTTGGCGTTATGGCCTTAATACTTGCGTATTGTATGTTTATTGTGGCCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGc < 8:130400/144‑1 (MQ=255) gcgGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGc > 5:168656/1‑149 (MQ=255) cgGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCg < 5:318378/149‑1 (MQ=255) tcgtcgCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCACCCAGT‑GAAACGAAATCGGCgtag > 5:211135/1‑149 (MQ=255) tGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGttt > 6:255583/1‑149 (MQ=255) ccGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTc > 7:142419/1‑147 (MQ=255) ccGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCaa < 1:339608/149‑1 (MQ=255) ccGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCaa < 4:301859/149‑1 (MQ=255) tGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGaa < 5:255583/149‑1 (MQ=255) tGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGa < 6:399935/148‑1 (MQ=255) cccTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAAt < 3:151667/148‑1 (MQ=255) cccTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATc < 5:7300/149‑1 (MQ=255) ccTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCg > 2:381359/1‑149 (MQ=255) atataCTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGTCGGTTTCGCAGAGTTTCCCTACGGCCACCCAGTCGAAACGAAATCGGCGTAGTATGTTTc < 1:5212/136‑1 (MQ=255) atataCTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGTCGGTTTCGCAGAGTTTCCCTACGGCCACCCAGT‑GAAACGAAATCGGCGTAGTATGTTTc > 2:5212/1‑135 (MQ=255) taCTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTAcc > 7:197826/1‑149 (MQ=255) taCTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTAc < 2:298281/148‑1 (MQ=255) tGGCGAATCGTAGGATTATGTTGCTCCAAACGTGGGAAGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCAGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCgg > 7:54206/1‑149 (MQ=255) gCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGcc > 7:171150/1‑149 (MQ=255) gCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGc < 8:142419/148‑1 (MQ=255) gAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGc > 6:351929/1‑113 (MQ=255) gAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGc < 5:351929/113‑1 (MQ=255) gAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGt < 8:202216/122‑1 (MQ=255) gAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGt > 7:202216/1‑122 (MQ=255) tCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTgc < 5:345026/149‑1 (MQ=255) gTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CACCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTgcgc < 4:337421/149‑1 (MQ=255) tAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTgcgc > 8:72780/1‑148 (MQ=255) ggATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCca < 5:388116/148‑1 (MQ=255) gATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGATATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCcaca > 2:51960/1‑149 (MQ=255) gATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCcaca < 8:171150/149‑1 (MQ=255) aTTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCacac < 7:72780/149‑1 (MQ=255) ttATGTTGCTCCTAACGTGGGATGTTGTGCGAAAAGCGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCcaca > 1:61453/1‑148 (MQ=255) tggtGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCACCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCaa < 6:211135/145‑1 (MQ=255) tGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc > 7:5952/1‑149 (MQ=255) tGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc < 1:381359/149‑1 (MQ=255) tGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc > 4:323437/1‑149 (MQ=255) gTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc > 2:325397/1‑148 (MQ=255) gTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc > 7:322100/1‑148 (MQ=255) tCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAg > 8:359727/1‑149 (MQ=255) ccTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCt > 4:6722/1‑109 (MQ=255) ccTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCt < 3:6722/109‑1 (MQ=255) cTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTATGGCCGCCCAGT‑GAAACGAAATCTGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCACCGAAAAGc < 1:333817/148‑1 (MQ=255) cTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc > 8:154676/1‑141 (MQ=255) cTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAAc < 7:154676/141‑1 (MQ=255) tGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACgg < 6:168656/149‑1 (MQ=255) tgttgtGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGt > 1:304777/1‑146 (MQ=255) tctgCGAAAC‑CGCCTGACAATAGTGACCGGCGTTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAgg > 1:202292/3‑149 (MQ=38) tctgCGAAAC‑CGCCTGACAATAGTGACCGGCGTTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAgg > 4:15237/3‑149 (MQ=38) gtgCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCTTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAgg < 3:323437/148‑1 (MQ=255) tgCGAAAC‑CGCCTGACAATAGTGACCGGCGTTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGcc > 2:51091/1‑149 (MQ=38) gAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCa < 2:304777/149‑1 (MQ=255) aaaa‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCAt > 4:51690/1‑149 (MQ=255) aaa‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACAGCAACGAAAAGCGTCACGGGTCAGAGGCCCCATc < 8:54206/149‑1 (MQ=255) aaa‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATc > 3:14549/1‑149 (MQ=255) gCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGaaaa > 7:206712/1‑121 (MQ=255) gCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGaaaa < 8:206712/121‑1 (MQ=255) gCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGATGAATCGTTTACACGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCACAGGCACCATCGCAt > 1:151182/1‑149 (MQ=255) ccGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATg < 4:14549/149‑1 (MQ=255) cGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGtt > 6:304440/1‑89 (MQ=255) cGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGtt < 5:304440/89‑1 (MQ=255) gTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGAtt < 8:5952/149‑1 (MQ=255) aCTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAg < 1:325397/149‑1 (MQ=255) tATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCt < 3:51690/149‑1 (MQ=255) tATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCt > 3:302109/1‑149 (MQ=255) gTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGcccc < 4:250831/129‑1 (MQ=255) gTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGcccc > 3:250831/1‑129 (MQ=255) gcgggTTCCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCagag > 6:272026/4‑120 (MQ=255) gcgggTTCCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCagag < 5:272026/117‑1 (MQ=255) gCGTTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACaaga < 2:202292/149‑1 (MQ=255) | ACGCCGAAAGCGATACAAAATCCACACAGATATTCGTGAATGCGCGGTCGTCGCTGGCCGTTATGCCCTATATACTGGCGAATCGTAGGATTATGTTGCTCCTAACGTGGGATGTTGTGCGAAAA‑CGCCGGTCACTATTGTCAGGCGGTTTCGCAGAGTTTCCCTACGGCCGCCCAGT‑GAAACGAAATCGGCGTAGTATGTTTCAAGCTGAATCGTTTACCCGGCCTTTGCGCCACACCAACGAAAAGCGTCACGGGTCAGAGGCCCCATCGCATGATTGAGCTCGAACAAGA > NC_002947/6079314‑6079606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |