| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 702,765 | A→T | 5.5% | intergenic (+13/‑119) | PP_23SD → / → PP_5SD | 23S ribosomal RNA/5S ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 702,765 | 0 | A | T | 5.5% | 247.9 / 2.6 | 89 | intergenic (+13/‑119) | PP_23SD/PP_5SD | 23S ribosomal RNA/5S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base A (44/40); new base T (2/3); total (46/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAAC > NC_002947/702627‑702910 | aCTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGc > 5:91030/1‑149 (MQ=11) cTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCGTAGCAGATTGct < 1:132460/149‑2 (MQ=2) ggATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATCTAACACCCAAGCAATCTGCGTAGCAGATTGcttg < 3:40508/148‑4 (MQ=11) ggATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCGTAGCAGATTGcttg < 3:395856/148‑4 (MQ=2) gATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCggtgg < 6:91030/149‑1 (MQ=32) gAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCggtggt < 2:177142/144‑1 (MQ=32) gAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGa > 6:152789/1‑149 (MQ=32) aaTCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGATCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGa < 3:210752/148‑1 (MQ=17) tCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACg > 2:28711/1‑148 (MQ=32) ccccTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCggtggt > 4:53125/1‑140 (MQ=32) ccccTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCggtggt < 3:53125/140‑1 (MQ=32) ccccTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGaa < 1:192413/149‑1 (MQ=32) ccTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGa > 4:398191/1‑146 (MQ=32) cTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGa > 6:347091/1‑149 (MQ=32) ggCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGa > 2:90430/1‑148 (MQ=32) ccGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGaaaa < 1:376308/149‑1 (MQ=32) tCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTc > 6:403820/1‑149 (MQ=32) taggacgTTGATAGTTTGGGTGTGTAAGCGCTGTTATTCTTTGTGCTAACCAATACTAATTGCTCGTTAGTCTTGACCATATAACACCCAAGGAATCTGCTACGAAGATTGCGGTTGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTa < 3:255872/146‑1 (MQ=11) tACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTa > 6:408871/1‑149 (MQ=32) cgacgTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTa < 4:57596/147‑1 (MQ=32) gTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAag < 5:408871/149‑1 (MQ=32) gTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATAAAACACCCAAGCAATCTGCTACGCAGATTGCGGTCCTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACaa > 7:291179/1‑148 (MQ=12) ggTTGGGTGTGTAAGCGCTTCGACGCTGTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCg < 4:283465/149‑1 (MQ=11) gTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACTCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCttt < 4:352341/134‑1 (MQ=17) gTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCttt > 3:352341/1‑134 (MQ=32) gTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCg > 3:225556/1‑148 (MQ=32) ttGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGc > 5:63267/1‑148 (MQ=32) gggTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTc < 4:181659/124‑1 (MQ=32) tgtAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATc < 6:63267/148‑1 (MQ=32) tAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTTGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGc < 3:111704/148‑1 (MQ=17) tAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTAGTGCTTTACACAAGAGCTTCGCAAATATCGCa > 8:27171/1‑149 (MQ=17) tAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGAAATCTGCTACGCAGATTGCGGTTGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGc < 6:405037/148‑1 (MQ=17) gcgcTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCatat > 8:167640/1‑149 (MQ=32) gCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCg < 7:168678/148‑1 (MQ=32) gCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCg > 8:168678/1‑148 (MQ=32) gTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTg < 5:53522/149‑1 (MQ=32) aGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTTGTGAAGACGAATAGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTggg < 1:327788/148‑1 (MQ=12) cTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGAAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGt < 1:262244/149‑1 (MQ=17) tAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGa > 4:325911/1‑89 (MQ=33) tAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGa < 3:325911/89‑1 (MQ=33) aaCCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTc > 4:399192/1‑148 (MQ=32) aaCCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTc > 8:214019/1‑148 (MQ=32) aaCCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCACATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTc > 6:346647/1‑148 (MQ=17) cAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATc < 7:214019/149‑1 (MQ=32) cAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATc > 6:334815/1‑149 (MQ=32) aaTACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTTGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCAt < 2:128952/147‑1 (MQ=17) aaTACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTgg < 2:339309/138‑1 (MQ=32) aaTACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTgg > 1:339309/1‑138 (MQ=32) aaTACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCt > 7:275110/1‑149 (MQ=32) aaTACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCt < 4:225556/149‑1 (MQ=32) aaTACTAATTGCCCGTGAGGCTTGACCATATAACACACAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGTCTGTCCATca > 1:128952/1‑148 (MQ=17) aTACTAATTGCCCGTGAGGCTTGACCTTATAAGACCCAATCAATCTGCTACGCTTATTGCTGTGGTGAATACGAA‑AGACCCGAAAATTCGTGCTTTACTCAAGAGCTTCGCAAATATCTCATATCCGAATTCGCTGGGCTGTCCATCtt < 2:405780/149‑2 (MQ=11) tACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTg > 8:131460/1‑148 (MQ=32) cTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGa > 1:379413/1‑148 (MQ=32) tAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGc < 5:72392/116‑1 (MQ=32) tAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGc > 6:72392/1‑116 (MQ=32) tAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACa > 6:362948/1‑149 (MQ=32) tAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGCGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGGTGGGCTGTCCATCTGGACa > 8:359964/1‑149 (MQ=17) aTTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACAt > 6:220153/1‑148 (MQ=32) ttGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTc < 1:28711/149‑1 (MQ=32) cccGTGAGGCTTGACCATATAACACCCTAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTcc > 4:93875/1‑134 (MQ=17) cccGTGAGGCTTGACCATATAACACCCTAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTcc < 3:93875/134‑1 (MQ=17) cccGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTgg < 5:334815/149‑1 (MQ=32) cGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGc > 8:30274/1‑148 (MQ=32) gTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCaa > 8:122606/1‑149 (MQ=32) gACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGc < 3:398632/138‑1 (MQ=32) gACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGc > 4:398632/1‑138 (MQ=32) ccATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCtt < 5:152789/149‑1 (MQ=32) cATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCtta < 7:131460/149‑2 (MQ=17) ataACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATc > 6:339509/1‑90 (MQ=33) aaCACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGt > 3:399390/1‑61 (MQ=35) aaCACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGt < 4:399390/61‑1 (MQ=35) aaCACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTgacgac > 6:109297/1‑149 (MQ=32) acacCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGAcc < 5:220153/149‑1 (MQ=32) cacCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCa < 7:238457/149‑1 (MQ=32) acCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGTCTGTCCATCTGGACATTCTGGCAACAGa > 7:101657/1‑133 (MQ=17) acCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGTCTGTCCATCTGGACATTCTGGCAACAGa < 8:101657/133‑1 (MQ=17) ccAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCa > 5:43174/1‑146 (MQ=32) cAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGTTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATaga < 1:90430/149‑1 (MQ=17) cAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATaga < 5:403820/149‑1 (MQ=32) accgCAATCTGCGTAGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATa > 3:193098/4‑147 (MQ=255) accgCAATCTGCGTAGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGATTTACACAAGAGCTTCTAAAATATAGCATATAAGAATTCTCTGGGCTGTCCATATGGACAATCTGGAAAAAGAATTTCTTGAAGACCATa > 7:391349/4‑147 (MQ=11) aaGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATagag < 3:399192/149‑1 (MQ=32) aaGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATagag > 1:378982/1‑149 (MQ=32) aTCTGCTACGCAGATTGCGGTTGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTg < 7:27171/149‑1 (MQ=17) tGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGaa > 6:14803/1‑149 (MQ=32) cTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAac > 3:166595/1‑148 (MQ=31) cTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAac > 2:184716/1‑148 (MQ=31) cTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAac > 8:202597/1‑148 (MQ=31) | ACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAGCAATCTGCTACGCAGATTGCGGTGGTGAAGACGAA‑AGACCCGAAAATTCGTGCTTTACACAAGAGCTTCGCAAATATCGCATATCCGAATTCGCTGGGCTGTCCATCTGGACATTCTGGCAACAGAATTTCTTGACGACCATAGAGCATTGGAAC > NC_002947/702627‑702910 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |