| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 707,563 | T→A | 5.1% | intergenic (‑215/‑36) | rpsT ← / → murJ | 30S ribosomal protein S20/lipid II flippase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 707,563 | 0 | T | A | 5.1% | 309.2 / 4.7 | 97 | intergenic (‑215/‑36) | rpsT/murJ | 30S ribosomal protein S20/lipid II flippase |
| Reads supporting (aligned to +/- strand): ref base T (44/48); new base A (2/3); total (46/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.94e-01 | |||||||||||
GAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCG > NC_002947/707417‑707707 | gAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGTAAGATTCCTTTCTGCTGCGCTACAGCTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCt < 1:333120/149‑1 (MQ=255)gAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTg < 5:229545/148‑1 (MQ=255) ggATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCTGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGc < 3:146182/149‑1 (MQ=255) gATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCg > 5:193073/1‑149 (MQ=255) gATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCg > 8:286068/1‑149 (MQ=255) gATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGCCAGACAGCg > 4:208219/1‑149 (MQ=255) tGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGCCAGACAGCGTc < 3:208219/149‑1 (MQ=255) tGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGCCAGACAGCGTc < 7:390267/149‑1 (MQ=255) gTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTcc > 3:18359/1‑149 (MQ=255) tCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCt < 1:193070/138‑1 (MQ=255) tCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCt > 2:193070/1‑138 (MQ=255) tCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCct < 7:46447/149‑1 (MQ=255) tCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCct > 7:40419/1‑149 (MQ=255) tCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGCCAGACAGCGTcc < 2:365913/148‑1 (MQ=255) cAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCctc > 4:235814/1‑149 (MQ=255) cAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGGACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCctc > 5:349439/1‑149 (MQ=255) aaGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCctct > 3:297312/1‑149 (MQ=255) aaGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGCCACCCCTGCGAAGGCGCGGCAGTATCGCACATTCGGACGCTGAGTGGCAGCGTCctct > 4:311012/1‑149 (MQ=255) aGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTg > 3:223836/1‑149 (MQ=255) ggCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGt > 4:351563/1‑149 (MQ=255) ggCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGt > 2:357203/1‑149 (MQ=255) gCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTc < 2:366106/149‑1 (MQ=255) ccACCTGCAAGGTTCCGCCGAGCGGTGCTCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCa < 7:28018/149‑1 (MQ=255) ccTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTg < 2:119353/149‑1 (MQ=255) cTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTgg > 2:124770/1‑149 (MQ=255) cTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTgg < 8:329932/149‑1 (MQ=255) cAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGc < 8:40419/147‑1 (MQ=255) cAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGt < 2:217108/149‑1 (MQ=255) cAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGt < 3:235814/149‑1 (MQ=255) cAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGt < 5:31164/149‑1 (MQ=255) aaGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGt > 4:308312/1‑148 (MQ=255) aGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGa < 4:164713/149‑1 (MQ=255) aGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGa < 3:351563/149‑1 (MQ=255) gccgAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTGCTCTGTCATTGGCGTGAATCtttt > 5:425730/1‑149 (MQ=255) ccgAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTc < 4:18359/149‑1 (MQ=255) ccgAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTc < 5:260573/149‑1 (MQ=255) gTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAAc < 3:308312/149‑1 (MQ=255) aaGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAAt < 7:286068/149‑1 (MQ=255) cGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATccc < 4:326575/149‑1 (MQ=255) gggAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCt < 4:297312/149‑1 (MQ=255) gggAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCt < 1:124770/149‑1 (MQ=255) ggAAAGATTCCTTTCTGCTGCGCGTC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTg < 3:311012/149‑1 (MQ=255) aaaGAATCCGTTCTGCCGCGCGAC‑‑CTGTACACTCCGGAAATTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGc < 1:87748/149‑1 (MQ=255) aGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTg > 1:195578/1‑149 (MQ=255) ttCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCTCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCt < 4:36531/145‑1 (MQ=255) ttCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACATGCTCAAATCCCTGGCt > 3:36531/1‑145 (MQ=255) tCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAg > 5:114849/1‑148 (MQ=255) tCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGCCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTAAAATCCCTCGCTGCAg > 6:328060/1‑148 (MQ=255) ctgctgCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTc > 5:399798/1‑149 (MQ=255) tgctgcGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCtttt < 2:243904/111‑1 (MQ=255) tgctgcGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCtttt > 1:243904/1‑111 (MQ=255) tgctgcGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTc > 1:214606/1‑148 (MQ=255) gctgcGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGa > 1:208729/1‑149 (MQ=255) ctgcGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGa < 6:114849/148‑1 (MQ=255) gcgAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCAcc < 2:195578/149‑1 (MQ=255) gAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCAt < 2:208729/149‑1 (MQ=255) cTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGAt > 2:185981/1‑149 (MQ=255) cacTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTcgc > 6:14781/1‑149 (MQ=255) cacTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACATGCTCAAATCAATGGCTGCAGTAAGCTCGATCACCATGATTTcgc > 2:364284/1‑149 (MQ=255) acTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTCCGCTAGAGCACCAAGCTTTcgcg > 6:290746/1‑149 (MQ=255) cTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCgg < 6:193073/149‑1 (MQ=255) tCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGc > 2:297789/1‑65 (MQ=255) tCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGc < 1:297789/65‑1 (MQ=255) gggAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTg < 1:357203/149‑1 (MQ=255) gggAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTg > 5:201900/1‑149 (MQ=255) aaTTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTg < 1:185981/149‑1 (MQ=255) aaTTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTg > 1:399121/1‑149 (MQ=255) aTTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTgg < 5:14781/149‑1 (MQ=255) ggCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCttt < 4:223836/148‑1 (MQ=255) ggCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTg > 7:211932/1‑149 (MQ=255) tCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCg > 4:170364/1‑115 (MQ=255) tCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCg < 3:170364/115‑1 (MQ=255) tCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTc > 7:11191/1‑149 (MQ=255) cccTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTcgc > 6:92737/1‑149 (MQ=255) cccTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTcg < 8:211932/148‑1 (MQ=255) cTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGa < 2:399121/149‑1 (MQ=255) cGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCa > 8:163906/1‑115 (MQ=255) ggCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATc < 1:220798/149‑1 (MQ=255) gAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATcc > 1:263574/1‑143 (MQ=255) gAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATcc < 2:263574/143‑1 (MQ=255) gAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGccc > 5:287410/1‑149 (MQ=255) gCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCtt > 2:55916/1‑149 (MQ=255) cacaTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCttt > 1:133729/1‑149 (MQ=255) cacaTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCttt < 6:402545/149‑1 (MQ=255) acaTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGa > 6:54070/1‑89 (MQ=255) acaTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGa < 5:54070/89‑1 (MQ=255) acaTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTg < 1:364284/149‑1 (MQ=255) aTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCt < 6:378625/70‑1 (MQ=255) aTTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCt > 5:378625/1‑70 (MQ=255) aggACGCTGCCAGACAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCt > 5:31642/2‑149 (MQ=255) ggAGGCTGTCTGGCAGCGTCCTCTGTCATTCGCGGGAATCTTTTCGATGAACCTGCGCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGGCCGCATCTTTGGTGCTg < 6:425730/149‑1 (MQ=255) ggACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCGAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTg > 5:237803/1‑149 (MQ=255) ggACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTg < 6:399798/149‑1 (MQ=255) gACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTgg < 5:92737/149‑1 (MQ=255) gACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTgg > 8:327021/1‑149 (MQ=255) cggtGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCTATGCACCTGCTCAAATCGCTGGCTGCAGTAAGCTCGATCAGCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGgtg < 5:328060/146‑1 (MQ=255) cGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGgtg < 2:214606/149‑1 (MQ=255) gCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGgtgt > 3:26538/1‑149 (MQ=255) gCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGgtgt < 8:11191/149‑1 (MQ=255) tGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCg > 2:288364/1‑149 (MQ=255) | GAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTGCGCCAACAAGCGGGAAAGATTCCTTTCTGCTGCGCGAC‑‑CTGTACACTCGGGAATTTTTGGCTCCCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTCGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCG > NC_002947/707417‑707707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |