| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 747,425 | C→A | 6.0% | intergenic (‑552/‑242) | PP_0638 ← / → PP_5448 | transposase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 747,425 | 0 | C | A | 6.0% | 327.3 / 8.1 | 100 | intergenic (‑552/‑242) | PP_0638/PP_5448 | transposase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (47/47); new base A (2/4); total (49/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.51e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTGGGCTCTCACT > NC_002947/747278‑747572 | ggCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCt < 7:280423/149‑1 (MQ=255) cGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTgg < 4:281810/149‑1 (MQ=255) gTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTggg < 5:168385/149‑1 (MQ=255) gCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCt < 6:355149/143‑1 (MQ=255) gCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCt > 5:355149/1‑143 (MQ=255) cTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGtt > 6:22581/1‑149 (MQ=255) gCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACTCCCAGGATGGGGGTTgg < 5:11327/148‑1 (MQ=255) gCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACTCCCAGGATGGGGGTTgg < 1:361402/148‑1 (MQ=255) gCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACTCCCAGGATGGGGGTTgg < 2:224468/148‑1 (MQ=255) gCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTg < 5:32630/147‑1 (MQ=255) aGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGAttttt < 6:174042/149‑1 (MQ=255) gCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGAttttt < 4:113488/148‑1 (MQ=255) cTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTttgt < 6:191004/149‑1 (MQ=255) tACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAgg > 3:277995/1‑148 (MQ=255) gcgTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGAc > 6:179803/1‑148 (MQ=255) gTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGAt < 6:66602/149‑1 (MQ=255) gTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGAt < 2:393927/149‑1 (MQ=255) tGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCAGACTGTGGCCAACCCCCATCCTGGGAGTTCGCGATTTTTATTGGAGGGACGATGccaca > 8:169343/1‑149 (MQ=255) gggAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTgg < 2:369752/120‑1 (MQ=255) gggAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTgg > 1:369752/1‑120 (MQ=255) gggAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAg < 4:230916/135‑1 (MQ=255) gggAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATATTTGTTGGAg > 3:230916/1‑135 (MQ=255) ttCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGa < 4:92430/108‑1 (MQ=255) ttCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGa > 3:92430/1‑108 (MQ=255) ttCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAatca > 4:21988/1‑149 (MQ=255) tCAAAAAACCACTGAGATTCTAACGGCAGTCATTGCGGAGGTGTAACGACGACACTGACTGTCACTCAAATCCAATCAGCATACTGTGGCCAACACCCATACTGGGAGTTGGAGATATTTGTTGGAGGGACTATGAAACACGAAatcat > 1:410132/1‑149 (MQ=255) aaaaaaCCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATg > 7:384931/1‑133 (MQ=255) aaaaaaCCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATg < 8:384931/133‑1 (MQ=255) aaaaaaCCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCg > 5:258822/1‑149 (MQ=255) cACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCg > 1:326477/1‑149 (MQ=255) aCTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGt > 4:272729/1‑149 (MQ=255) aCTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGt > 2:525/1‑149 (MQ=255) tGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTgg > 2:217746/1‑149 (MQ=255) tGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTgg > 1:9986/1‑149 (MQ=255) agaTTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTgg < 7:164410/147‑1 (MQ=255) tACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGACACTCa > 3:44560/1‑148 (MQ=255) ccGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCAcc < 6:258822/148‑1 (MQ=255) cGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCAt < 2:326477/149‑1 (MQ=255) ggCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGaa > 2:209223/1‑120 (MQ=255) ggCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGaa < 1:209223/120‑1 (MQ=255) gCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAatcat < 4:82196/124‑1 (MQ=255) gCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAatcat > 3:82196/1‑124 (MQ=255) gCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGt < 2:9986/149‑1 (MQ=255) aGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCa > 7:392078/1‑141 (MQ=255) aGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCa < 8:392078/141‑1 (MQ=255) ttGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGAtt > 4:406954/1‑85 (MQ=255) ttGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGAtt < 3:406954/85‑1 (MQ=255) gAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCTACTCACCATGTAGGAGGATCTcc < 1:525/149‑1 (MQ=255) gtgtAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGTGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACCCACCATGTAGGAGGATCTCCGt < 7:62319/148‑1 (MQ=255) gtgtAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTa < 3:21988/149‑1 (MQ=255) gtgtAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTa < 5:22581/149‑1 (MQ=255) gtAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCCACCCCCATCCTCGGAGTTGGCGAGTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACACCCCATGTAGGAGGATCTCCGAAt > 5:199195/1‑148 (MQ=255) acgaccCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCGCCATCCTGGGAGTTGGCCATTTTTGTTGGAGGGATCATGACACACGAAAACATCGGTTAGCGTGGCCACTCAGCATGTAGGAGGAACTCCGTATgag > 8:179054/1‑148 (MQ=255) cgacgCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTag < 7:1290/130‑1 (MQ=255) cgacgCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTag > 8:1290/1‑130 (MQ=255) gacgCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCACCGTATGAGAAc < 3:272729/149‑1 (MQ=255) acgCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGtt < 2:87041/106‑1 (MQ=255) acgCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGtt > 1:87041/1‑106 (MQ=255) cACTGACTGTCACTCATATCCCATCATCATACTGTTGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGaa < 3:246113/143‑1 (MQ=255) cACTGACTGTCACTCAAATCCCATCAGCATACTGTCGCCAACCCCCATCCTGGGAGTTGGAGATTTTTGTTGGAGGGACGATGACACACGAAAACATCGGATAGCGTCGCCACTCCCCATGTAGGAGGATCTCCCTATGAGaa > 4:246113/1‑143 (MQ=255) actgactgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGtttt > 8:322700/1‑149 (MQ=255) ctgactgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTttgttg > 1:22862/1‑70 (MQ=255) ctgactgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTttgttg < 8:304741/70‑1 (MQ=255) ctgactgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTttgttg > 7:304741/1‑70 (MQ=255) ctgactgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTttgttg < 2:22862/70‑1 (MQ=255) actgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCTGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttgtt < 2:251663/148‑1 (MQ=255) actgTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttgtt < 7:322700/148‑1 (MQ=255) ctgTCACTCAAATCCCATCATCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGTCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttgttg < 8:242352/148‑1 (MQ=255) aCTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTa > 6:277360/1‑126 (MQ=255) aCTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCtt > 2:248702/1‑149 (MQ=255) tCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttgtt > 4:196178/1‑140 (MQ=255) tCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttgtt < 3:196178/140‑1 (MQ=255) tCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTg > 7:268686/1‑149 (MQ=255) cATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTCTTGTGTCTTGGGCTTGc > 1:150151/1‑147 (MQ=255) aTCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAg > 2:62383/1‑149 (MQ=255) gCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGc < 7:104099/142‑1 (MQ=255) gCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTATGTTGTGTCTTGGGCTTGCAAGTGCa < 1:217746/149‑1 (MQ=255) gCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCAGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGc > 8:104099/1‑142 (MQ=255) aCTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTc > 5:339905/1‑128 (MQ=255) aCTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTc < 6:339905/128‑1 (MQ=255) aCTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCt > 4:362212/1‑149 (MQ=255) aCTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCt > 4:403076/1‑149 (MQ=255) tgtgGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTc > 6:282187/1‑149 (MQ=255) tgGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCt < 1:248702/148‑1 (MQ=255) gCCAACCACCTTCCTGGGAGGTGGCGATTTTTGTTGGATGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCtgt < 7:169343/148‑1 (MQ=255) ccAACTCCCAGGATGGGGGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttgtt < 2:94735/116‑1 (MQ=255) ccAACTCCCAGGATGGGGGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttgtt > 1:94735/1‑116 (MQ=255) ccAACTCCCAGGATGGGGGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCtgtgt > 4:28180/1‑149 (MQ=255) cAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCtgtgtg > 5:403165/1‑149 (MQ=255) aaCCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTg > 3:259275/1‑128 (MQ=255) aaCCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTg < 4:259275/128‑1 (MQ=255) aaCCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACCGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTgg > 5:127178/1‑149 (MQ=255) ccccATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTag < 8:115587/82‑1 (MQ=255) ccccATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTag > 7:115587/1‑82 (MQ=255) ccATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttgtt < 5:123283/109‑1 (MQ=255) ccATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTttgtt > 6:123283/1‑109 (MQ=255) cATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTGGGCtctc < 3:362212/149‑1 (MQ=255) cATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTGGGCtctc < 1:62383/149‑1 (MQ=255) tCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATCACACACGAAATCATCGGATAGCGTGGCCACTCACCATGTAGGAGCATCTCCGAATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTGGGCTCTCAc < 8:35364/149‑1 (MQ=255) ccTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTGGGCTCTCACt > 4:321293/1‑149 (MQ=255) | GGCGTTGCTCGCACCTGAGCTTGATCTACGCGTTCTCTGGGAATCTTCAAAAAACCACTGAGATTCTACCGGCAGTCATTGCGGAGGTGTAACGACGCCACTGACTGTCACTCAAATCCCATCAGCATACTGTGGCCAACCCCCATCCTGGGAGTTGGCGATTTTTGTTGGAGGGACGATGACACACGAAATCATCGGTTAGCGTGGCCACTCACCATGTAGGAGGATCTCCGTATGAGAACGGTTTTGTTGTGTCTTGGGCTTGCAAGTGCAGGCTTCTGTGTGGGCTCTCACT > NC_002947/747278‑747572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |