Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 788,584 A→T 6.3% intergenic (+34/‑179) ettA → / → gdhA ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947788,5840AT 6.3% 272.4 / 4.9 89intergenic (+34/‑179)ettA/gdhAADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (44/39);  new base T (3/3);  total (47/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTG  >  NC_002947/788439‑788730
                                                                                                                                                 |                                                                                                                                                   
cGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTg                                                                                                                                                  <  6:214553/149‑1 (MQ=255)
       ctcttcGAAGTTAACTACACCGAGTACGAACCCTACCGCAAGAAGCGTCTGGGTGATTCTGCTGCCCAGCCTCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCa                                                                                                                                            <  8:371085/147‑1 (MQ=255)
          ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAtttt                                                                                                                                       >  2:302045/1‑149 (MQ=255)
            cGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAttttt                                                                                                                                      <  6:209888/148‑1 (MQ=255)
                  tAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTg                                                                                                                               >  5:72665/1‑149 (MQ=255)
                     cTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAttttt                                                                                                                                      <  4:185260/139‑1 (MQ=255)
                     cTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAttttt                                                                                                                                      >  3:185260/1‑139 (MQ=255)
                     cTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGCGGCCCCAAGTGGCCCCATTATTGTGCCTGGCg                                                                                                                            >  6:280963/1‑149 (MQ=255)
                      tACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCg                                                                                                                            >  1:370741/1‑148 (MQ=255)
                      tACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCg                                                                                                                            >  6:97892/1‑148 (MQ=255)
                      tACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAAAATGGGGCCACTTGGGGCCCCAttc                                                                                                                                        >  5:151859/1‑135 (MQ=255)
                      tACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGAACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAAAATGGGGCCACTTGGGGCCCCAttc                                                                                                                                        <  6:151859/136‑2 (MQ=255)
                        cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTgg                                                                                                                              <  8:178786/144‑1 (MQ=255)
                        cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTgg                                                                                                                              >  7:178786/1‑144 (MQ=255)
                        cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGAc                                                                                                                         <  5:97892/149‑1 (MQ=255)
                        cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGAc                                                                                                                         <  3:283092/149‑1 (MQ=255)
                        cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGAc                                                                                                                         <  7:102069/149‑1 (MQ=255)
                           cGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGc                                                                                                                      >  6:417192/1‑149 (MQ=255)
                            gAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGc                                                                                                                      >  7:210686/1‑148 (MQ=255)
                            gAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGc                                                                                                                      >  1:134400/1‑148 (MQ=255)
                                 cGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAAAATGGGGCCACTTGGGGCCCCATTCTtgt                                                                                                                                    >  1:256754/1‑129 (MQ=38)
                                 cGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAAAATGGGGCCACTTGGGGCCCCATTCTtgt                                                                                                                                    <  2:256754/129‑1 (MQ=38)
                                  gAAGCCGACCGCAAGAAGCGTCTGGGTGATGTTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTtgt                                                                                                                                    <  4:186647/128‑1 (MQ=255)
                                  gAAGCCGACCGCAAGAAGCGTCTGGGTGATGTTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTtgt                                                                                                                                    >  3:186647/1‑128 (MQ=255)
                                  gAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt                                                                                                               >  6:277477/1‑149 (MQ=255)
                                  gAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt                                                                                                               >  4:66043/1‑149 (MQ=255)
                                  gAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt                                                                                                               >  4:393059/1‑149 (MQ=255)
                                       cGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggc                                                                                                            >  4:284507/1‑147 (MQ=255)
                                        gACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgag                                                                                                         >  4:205369/1‑149 (MQ=255)
                                        gACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgag                                                                                                         <  3:66043/149‑1 (MQ=255)
                                           cGCAAGAAGCGTCTGTGTGATGCTGCTGCCAAGCCGAACCGTGTACGGCACAAGAAACTGTCCCAGTAAGAAGTTTTTATGATGCACAAGAATGGGGAACAAATTGTCCCCATTTTTGTGCATGGCGGACCGCTATAAATggcgaggc                                                                                                       >  8:119805/1‑148 (MQ=255)
                                           cGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggc                                                                                                       >  2:124419/1‑148 (MQ=255)
                                              aagaagCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg                                                                                                   <  8:210686/149‑1 (MQ=255)
                                              aagaagCGTCTGGGTGATGCTGCTGAACAGCCGCACCGTGTACGTCACAAGAAACTGGCCCAGTAAGCAGGTTTTCTGATGCACAAGTATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACGGCTATAAATGGGGAGGCGAAg                                                                                                   <  8:304282/149‑1 (MQ=255)
                                                  agCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGgtgt                                                                                               <  1:124419/149‑1 (MQ=255)
                                                     gTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAtt                                                                                            <  8:206044/149‑1 (MQ=255)
                                                          ggTGATGCTGCTGCCCAGCCGCACCGTGTACTGCACAAGAAACTGGCCCAGTAAGGCTGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGTCCCCATTTTTGTGCCTTGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGt                                                                                        <  7:119805/148‑1 (MQ=255)
                                                          ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTg                                                                                         <  1:302045/148‑1 (MQ=255)
                                                          ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg                                                                                                   <  2:135235/137‑1 (MQ=255)
                                                          ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg                                                                                                   >  1:135235/1‑137 (MQ=255)
                                                          ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAtttt                                                                                          <  2:370741/146‑1 (MQ=255)
                                                          ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTg                                                                                         <  3:393059/147‑1 (MQ=255)
                                                          ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGt                                                                                        <  8:367310/148‑1 (MQ=255)
                                                             gATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGtata                                                                                     >  6:215663/1‑148 (MQ=255)
                                                               tgctgctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATacac                                                                                  <  6:72665/149‑1 (MQ=255)
                                                                  tgctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggcga                                                                                                     >  8:388177/1‑127 (MQ=255)
                                                                  tgctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggcga                                                                                                     <  7:388177/127‑1 (MQ=255)
                                                                      gcCCAGCCGCAACGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGAGAGGCGAAGATGTATTTTGTATACACTAACAt                                                                            >  4:55137/1‑148 (MQ=255)
                                                                       cccAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACAt                                                                            <  1:257587/147‑1 (MQ=255)
                                                                        ccAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaa                                                                          >  6:76272/1‑148 (MQ=255)
                                                                         cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGTATGGGGCCCCAAGTGGCCCCATTTTtgt                                                                                                                                    <  1:232758/89‑1 (MQ=255)
                                                                         cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTtgt                                                                                                                                    >  2:232758/1‑89 (MQ=255)
                                                                         cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaaaa                                                                        <  7:284132/149‑1 (MQ=255)
                                                                         cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaaaa                                                                        >  4:112481/1‑149 (MQ=255)
                                                                         cAGCCGCACCGTGTACGGAAAAAGAAACTGGCCCAGTAAGCCGGTTATCTGATGCACAAGAATGGGGCCCCAAGTGGCGCCATTTTTGAGCCTGGCGGACCGCTATAAATGGAGAGGCGAAGGTGTATTTTGTATACACTTACATaaaa                                                                        >  5:235418/1‑149 (MQ=255)
                                                                          aGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAACggcgag                                                                                                         <  7:251431/115‑1 (MQ=255)
                                                                          aGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAACggcgag                                                                                                         >  8:251431/1‑115 (MQ=255)
                                                                             cGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCa                                                                    <  3:284507/149‑1 (MQ=255)
                                                                                      tACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGGCTGGAGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAaataat                                                           >  1:130660/1‑149 (MQ=255)
                                                                                           cacaAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCa                                                       >  7:334809/1‑148 (MQ=255)
                                                                                               aGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATa                                                                           <  6:213879/124‑1 (MQ=255)
                                                                                               aGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATa                                                                           >  5:213879/1‑124 (MQ=255)
                                                                                                  aaCTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTc                                                        <  1:48706/140‑1 (MQ=255)
                                                                                                  aaCTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTc                                                        >  2:48706/1‑140 (MQ=255)
                                                                                                    cTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTAc                                                                              <  1:279938/116‑1 (MQ=255)
                                                                                                    cTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTAc                                                                              >  2:279938/1‑116 (MQ=255)
                                                                                                     tGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACAGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACa                                            <  5:417192/149‑1 (MQ=255)
                                                                                                             tAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGccc                                    >  2:372663/1‑149 (MQ=255)
                                                                                                               aGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGa                                              <  7:383353/137‑1 (MQ=255)
                                                                                                               aGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCAGTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGa                                              >  8:383353/1‑137 (MQ=255)
                                                                                                                gCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTAt                                 >  6:377884/1‑149 (MQ=255)
                                                                                                                gCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTATTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTAt                                 >  1:290637/1‑149 (MQ=255)
                                                                                                                 ccGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaaaaa                                                 >  4:142075/1‑132 (MQ=255)
                                                                                                                 ccGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaaaaa                                                 <  3:142075/132‑1 (MQ=255)
                                                                                                                    gTTTTCTGATGCACAAGAATTGGGCCACAAGTGGCCCCATTTTTGTGCCTGGCTGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCg                             >  2:286984/1‑149 (MQ=255)
                                                                                                                         cTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCTAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGc                         <  5:377884/148‑1 (MQ=255)
                                                                                                                            aTGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAt                      <  2:7440/148‑1 (MQ=255)
                                                                                                                             tGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAtt                     <  2:134400/148‑1 (MQ=255)
                                                                                                                               cacaAGAATGGGGCCCCAAGTCGCCCCATTTTTGTGCCTGGCGGAACGCTATAAATTGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGc                   <  3:55137/148‑1 (MQ=255)
                                                                                                                                acaAAAATGGGGCCACTTGGGGCCCCATTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAAGGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGc                   >  3:304612/1‑147 (MQ=39)
                                                                                                                                acaAAAATGGGGCCACTTGGGGCCCCATTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGc                   <  4:304612/147‑1 (MQ=39)
                                                                                                                                 caAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttc                >  6:335494/1‑149 (MQ=255)
                                                                                                                                  aaGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGCCCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTGACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTCcttct               >  7:290187/1‑149 (MQ=255)
                                                                                                                                   aGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGCCCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttgtt              >  5:248444/1‑149 (MQ=255)
                                                                                                                                   aGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttctt              >  8:239627/1‑149 (MQ=255)
                                                                                                                                    gAATGGGGCCCCCAGTGGCCCCATTTTTGTGGCTGGCGGACCGGTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCATATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCttgttg             <  8:290187/149‑1 (MQ=255)
                                                                                                                                    gAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg             >  6:159656/1‑149 (MQ=255)
                                                                                                                                        ggggCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTa          >  1:6439/1‑148 (MQ=255)
                                                                                                                                               cAAGTTTCCCCATTTTTGTGCCTGGCGGACCGCTATAAATTGCGAGGCGAATGTGTATTTTGTATACACTTACATAAAACGCACCATATAATTTCAAAAAAACGACTTTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTg  <  5:280963/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
CGTGGTGTTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTG  >  NC_002947/788439‑788730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: