| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 788,596 | T→C | 5.8% | intergenic (+46/‑167) | ettA → / → gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 788,596 | 0 | T | C | 5.8% | 249.7 / 4.6 | 88 | intergenic (+46/‑167) | ettA/gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (42/39); new base C (3/2); total (47/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.60e-01 | |||||||||||
TTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTGAAAAAACCAATAA > NC_002947/788449‑788743 | ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑tttt > 2:302045/1‑149 (MQ=255) cGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑ttttt < 6:209888/148‑1 (MQ=255) tAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTg > 5:72665/1‑149 (MQ=255) cTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑ttttt < 4:185260/139‑1 (MQ=255) cTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑ttttt > 3:185260/1‑139 (MQ=255) cTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGCGGCCCCAAGTGGCCCCA‑TTATTGTGCCTGGCg > 6:280963/1‑149 (MQ=255) tACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCg > 6:97892/1‑148 (MQ=255) tACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCg > 1:370741/1‑148 (MQ=255) cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTgg > 7:178786/1‑144 (MQ=255) cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTgg < 8:178786/144‑1 (MQ=255) cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGAc < 5:97892/149‑1 (MQ=255) cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGAc < 7:102069/149‑1 (MQ=255) cacCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGAc < 3:283092/149‑1 (MQ=255) cGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGc > 6:417192/1‑149 (MQ=255) gAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGc > 1:134400/1‑148 (MQ=255) gAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGc > 7:210686/1‑148 (MQ=255) cGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAAAATGGGGCCACTTGGGGCCCCA‑TTCTtgt < 2:256754/129‑1 (MQ=38) cGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAAAATGGGGCCACTTGGGGCCCCA‑TTCTtgt > 1:256754/1‑129 (MQ=38) gAAGCCGACCGCAAGAAGCGTCTGGGTGATGTTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTtgt < 4:186647/128‑1 (MQ=255) gAAGCCGACCGCAAGAAGCGTCTGGGTGATGTTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTtgt > 3:186647/1‑128 (MQ=255) gAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAAt > 4:393059/1‑149 (MQ=255) gAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAAt > 4:66043/1‑149 (MQ=255) gAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAAt > 6:277477/1‑149 (MQ=255) cGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATggc > 4:284507/1‑147 (MQ=255) gACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATggcgag > 4:205369/1‑149 (MQ=255) gACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATggcgag < 3:66043/149‑1 (MQ=255) cGCAAGAAGCGTCTGTGTGATGCTGCTGCCAAGCCGAACCGTGTACGGCACAAGAAACTGTCCCAGTAAGAAGTTTTTATGATGCACAAGAATGGGGAACAAATTGTCCCCA‑TTTTTGTGCATGGCGGACCGCTATAAATggcgaggc > 8:119805/1‑148 (MQ=255) cGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATggcgaggc > 2:124419/1‑148 (MQ=255) aagaagCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg < 8:210686/149‑1 (MQ=255) aagaagCGTCTGGGTGATGCTGCTGAACAGCCGCACCGTGTACGTCACAAGAAACTGGCCCAGTAAGCAGGTTTTCTGATGCACAAGTATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACGGCTATAAATGGGGAGGCGAAg < 8:304282/149‑1 (MQ=255) agCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGgtgt < 1:124419/149‑1 (MQ=255) gTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAtt < 8:206044/149‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACTGCACAAGAAACTGGCCCAGTAAGGCTGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGTCCCCA‑TTTTTGTGCCTTGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGt < 7:119805/148‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCATTTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTg < 1:302045/148‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg > 1:135235/1‑137 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg < 2:135235/137‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTAtttt < 2:370741/146‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTg < 3:393059/147‑1 (MQ=255) ggTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGt < 8:367310/148‑1 (MQ=255) gATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGtata > 6:215663/1‑148 (MQ=255) tgctgctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATacac < 6:72665/149‑1 (MQ=255) tgctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATggcgaggcga > 8:388177/1‑127 (MQ=255) tgctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATggcgaggcga < 7:388177/127‑1 (MQ=255) gcCCAGCCGCAACGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGAGAGGCGAAGATGTATTTTGTATACACTAACAt > 4:55137/1‑148 (MQ=255) cccAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACAt < 1:257587/147‑1 (MQ=255) ccAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaa > 6:76272/1‑148 (MQ=255) cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGTATGGGGCCCCAAGTGGCCCCA‑TTTTtgt < 1:232758/89‑1 (MQ=255) cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTtgt > 2:232758/1‑89 (MQ=255) cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaaaa > 4:112481/1‑149 (MQ=255) cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATaaaa < 7:284132/149‑1 (MQ=255) cAGCCGCACCGTGTACGGAAAAAGAAACTGGCCCAGTAAGCCGGTTATCTGATGCACAAGAATGGGGCCCCAAGTGGCGCCA‑TTTTTGAGCCTGGCGGACCGCTATAAATGGAGAGGCGAAGGTGTATTTTGTATACACTTACATaaaa > 5:235418/1‑149 (MQ=255) aGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAACggcgag < 7:251431/115‑1 (MQ=255) aGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAACggcgag > 8:251431/1‑115 (MQ=255) cGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCa < 3:284507/149‑1 (MQ=255) tACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGGCTGGAGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAaataat > 1:130660/1‑149 (MQ=255) cacaAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCa > 7:334809/1‑148 (MQ=255) aGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATa < 6:213879/124‑1 (MQ=255) aGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATa > 5:213879/1‑124 (MQ=255) aaCTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTc < 1:48706/140‑1 (MQ=255) aaCTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTc > 2:48706/1‑140 (MQ=255) cTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTAc < 1:279938/116‑1 (MQ=255) cTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTAc > 2:279938/1‑116 (MQ=255) tGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACAGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACa < 5:417192/149‑1 (MQ=255) tAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGccc > 2:372663/1‑149 (MQ=255) aGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGa < 7:383353/137‑1 (MQ=255) aGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑GTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGa > 8:383353/1‑137 (MQ=255) gCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTAt > 6:377884/1‑149 (MQ=255) gCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTATTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTAt > 1:290637/1‑149 (MQ=255) ccGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaaaaa > 4:142075/1‑132 (MQ=255) ccGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCaaaaaaa < 3:142075/132‑1 (MQ=255) gTTTTCTGATGCACAAGAATTGGGCCACAAGTGGCCCCA‑TTTTTGTGCCTGGCTGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCg > 2:286984/1‑149 (MQ=255) cTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCTAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGc < 5:377884/148‑1 (MQ=255) aTGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAt < 2:7440/148‑1 (MQ=255) tGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGAtt < 2:134400/148‑1 (MQ=255) cacaAGAATGGGGCCCCAAGTCGCCCCA‑TTTTTGTGCCTGGCGGAACGCTATAAATTGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGc < 3:55137/148‑1 (MQ=255) acaAAAATGGGGCCACTTGGGGCCCCA‑TTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAAGGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGc > 3:304612/1‑147 (MQ=39) acaAAAATGGGGCCACTTGGGGCCCCA‑TTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGc < 4:304612/147‑1 (MQ=39) caAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttc > 6:335494/1‑149 (MQ=255) aaGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGCCCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTGACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTCcttct > 7:290187/1‑149 (MQ=255) aGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGCCCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttgtt > 5:248444/1‑149 (MQ=255) aGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttctt > 8:239627/1‑149 (MQ=255) gAATGGGGCCCCCAGTGGCCCCA‑TTTTTGTGGCTGGCGGACCGGTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCATATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCttgttg < 8:290187/149‑1 (MQ=255) gAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg > 6:159656/1‑149 (MQ=255) ggggCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTa > 1:6439/1‑148 (MQ=255) cAAGTTTCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATTGCGAGGCGAATGTGTATTTTGTATACACTTACATAAAACGCACCATATAATTTCAAAAAAACGACTTTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTg < 5:280963/149‑1 (MQ=255) ggggCCCCA‑TTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTGaa > 5:8737/3‑148 (MQ=255) gCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTGaaaaa < 8:334809/148‑1 (MQ=255) ccccA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTGAAAAAAc < 5:215663/149‑1 (MQ=255) cccA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGtata > 8:122749/1‑58 (MQ=255) cccA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGtata < 7:122749/58‑1 (MQ=255) cccA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTGAAAAAAcc < 3:112481/149‑1 (MQ=255) ccA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTGAAAAAAcc > 8:345913/1‑148 (MQ=255) tttGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTGAAAAAACCAATaa < 2:130660/148‑1 (MQ=255) | TTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCACAAGAATGGGGCCCCAAGTGGCCCCA‑TTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATTTTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCTGAAAAAACCAATAA > NC_002947/788449‑788743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |