| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 857,639 | G→C | 5.3% | D395E (GAC→GAG) ‡ | phr ← | deoxyribodipyrimidine photolyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 857,639 | 0 | G | C | 5.3% | 249.4 / 3.0 | 75 | D395E (GAC→GAG) ‡ | phr | deoxyribodipyrimidine photolyase |
| Reads supporting (aligned to +/- strand): ref base G (31/40); new base C (2/2); total (33/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.08e-01 | |||||||||||
AAAAGGTCCGTCGATTTAATGGGTTGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGAACATGGCCACGACCATGC > NC_002947/857493‑857781 | aaaaGGTCCGTCGATTTAATGGGTTGATGGATGGCTTTTTCATCGAGCTACTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTCAAACC‑GGGTTGAAGAAACGGAAATAGGGCACagcgac > 2:153791/1‑147 (MQ=255) aaGGTCCGTCGATTTAATGGGTTGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCgg > 5:165311/1‑149 (MQ=255) agttcagTCGATTTAATTGGTTGATGGATGGCTTTTTCATCTAGCTCCTGTAGTTCCGGTACCCAGTTGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGTCACCGCGTCGGt < 3:308885/143‑1 (MQ=255) aGGTCCGTCGATTTAATGGGTTGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGt < 7:45352/149‑1 (MQ=255) cgtctttttATTTGGTTGATGGATGGCTTTTTCATGGATCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCgg < 8:331664/143‑1 (MQ=255) tCGATTTAATGGGTTGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTg < 3:67270/149‑1 (MQ=255) gATTTAATGGGTTGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTgg < 4:322930/148‑1 (MQ=255) aTTTAATGGGTTGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGaa < 3:149136/149‑1 (MQ=255) aTTTAATGGGTTGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGaa < 5:405991/149‑1 (MQ=255) ttAATGGGTTGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGc > 2:254654/1‑149 (MQ=255) aaTGGGTTGATGGATTGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCa < 5:262579/148‑1 (MQ=255) ggctGATGCATGGCTGTATCATCGAGCGCCGCGAGGACCGGTACCCAGTGGCGAAAGCACCGACCCTGTGGATCGAAGCGCGGCGACTGTGAAACC‑GGGGTGAAGATACGGAAATAGCGCCCCGCGTCGGTGCCGGTGGAAGCACT‑CCa < 4:262195/146‑1 (MQ=255) ttGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACt < 5:216936/149‑1 (MQ=255) ttGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACt > 5:157970/1‑149 (MQ=255) atggatggCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGc < 6:157970/148‑1 (MQ=255) atggCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGc < 7:175961/124‑1 (MQ=255) atggCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTgg > 8:237259/1‑130 (MQ=255) atggCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTgg < 7:237259/130‑1 (MQ=255) atggCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGATCAAGATACGGAAATAGGGCACCGCGTCgcagc > 8:175961/1‑120 (MQ=255) gCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAAccccc > 2:134375/1‑149 (MQ=255) cTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCg < 7:296098/149‑1 (MQ=255) tttttCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCgt > 3:392739/1‑149 (MQ=255) tttCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCgtt < 4:147038/148‑1 (MQ=255) cATCGAGCTCCTGTAGTTCCGGTACCCAGTTGCGAATGAACCGTCCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCgttgtt < 8:340564/148‑1 (MQ=255) aTCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGttgttg < 8:86884/148‑1 (MQ=255) gAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTggcgg < 2:94892/149‑1 (MQ=255) cTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGt > 8:14212/1‑149 (MQ=255) cTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGACGCGGTGccctat < 7:129936/109‑5 (MQ=255) cTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGACGCGGTGccctat > 8:129936/1‑105 (MQ=255) tGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGACCCGCGTCGGTGCCGGTGGAAGCCCT‑CCACTGCCAACCCCCGTTGTTGGCGGCCCGGTc > 5:131966/1‑149 (MQ=255) tAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCAGTGCCAACCCCCGTTGTTGGCGGCCAGGTc < 1:153791/147‑1 (MQ=255) ggTACCCAGTGGCGAATGAACCGAGCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAt > 2:323124/1‑149 (MQ=255) ccAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACCGGGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAgg > 1:313740/1‑149 (MQ=255) ccAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCCACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGt > 8:11415/1‑149 (MQ=255) cAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACt < 1:300056/106‑1 (MQ=255) cAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACt > 2:300056/1‑106 (MQ=255) cAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTg > 5:271866/1‑149 (MQ=255) cAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTg < 5:229876/149‑1 (MQ=255) aGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACTCCCACTGCCAACCCCCGTTGTTGGCGGTCAGGTCGCCGTCTAT‑CAGGTg < 1:90653/149‑1 (MQ=255) gAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCaag > 1:237571/1‑147 (MQ=255) aaTGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATg > 5:177145/1‑148 (MQ=255) aTGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGaa < 4:392739/149‑1 (MQ=255) aCCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑c < 5:81073/131‑1 (MQ=255) aCCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑c > 6:81073/1‑131 (MQ=255) ccGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGcc > 5:284957/1‑149 (MQ=255) ccTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCg > 7:384820/1‑149 (MQ=255) cTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGc > 2:90939/1‑149 (MQ=255) aTCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAACTAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCTCTTCCAACGCCCGGTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTTCCGCTCGCCCTTgc < 5:288770/149‑1 (MQ=255) gCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAAt > 3:252615/1‑148 (MQ=255) cGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAAt < 7:14212/147‑1 (MQ=255) cGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATc < 6:271866/148‑1 (MQ=255) gACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATcag > 1:320014/1‑149 (MQ=255) cTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATcag > 3:30646/1‑147 (MQ=255) tgtgAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTATCCAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATcagca < 1:90939/149‑1 (MQ=255) tgAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATcagcag < 6:165311/147‑1 (MQ=255) tgAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGt > 4:159168/1‑149 (MQ=255) aaCC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCGGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTGGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGACGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCt < 6:131966/149‑1 (MQ=255) gTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGa < 6:177145/149‑1 (MQ=255) gAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAgg < 6:284957/148‑1 (MQ=255) aaGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGaa > 8:321419/1‑149 (MQ=255) aaGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGaa > 8:188616/1‑149 (MQ=255) aaGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGaa > 2:28378/1‑149 (MQ=255) aTACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGa > 5:256203/1‑142 (MQ=255) aTACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGa < 6:256203/142‑1 (MQ=255) cGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGAACATgg < 2:313740/148‑1 (MQ=255) aaaTAGGGCACCGCGTCGGTGGCGGTGGAAGGAGT‑CGACTTCCAACCAGAGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGTA‑‑GTGCCGCTCGGCCTTGCGCCAGTGAATCAGCAGGTTCTTGCTGAGGAACATGGCCAc < 4:30646/149‑1 (MQ=255) tAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGAACATGGCCACGAc < 1:28378/149‑1 (MQ=255) ccggCACCGACGCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGaa < 1:335342/134‑1 (MQ=255) ccggCACCGACGCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGaa > 2:335342/3‑136 (MQ=255) gggCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAATCGTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGAACATGGCCACGa < 1:323124/148‑1 (MQ=255) ggCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGAACATGGCCACGACCAt > 2:29858/1‑149 (MQ=255) gCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGTCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTgcgc > 5:90400/1‑104 (MQ=255) gCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGTCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTgcgc < 6:90400/104‑1 (MQ=255) gCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGa > 7:221817/1‑84 (MQ=255) gCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGa < 8:221817/84‑1 (MQ=255) cACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGAACATGGCCACGACCATgc < 1:134375/149‑1 (MQ=255) cgTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCtt < 8:21418/94‑1 (MQ=255) cgTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCtt > 7:21418/1‑94 (MQ=255) gTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGAACATGGCCACGACCAt > 4:169646/1‑141 (MQ=255) gTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGAACATGGCCACGACCAt < 3:169646/141‑1 (MQ=255) | AAAAGGTCCGTCGATTTAATGGGTTGATGGATGGCTTTTTCATCGAGCTCCTGTAGTTCCGGTACCCAGTGGCGAATGAACCGACCCTGTGGATCGAAGCGCTGCGACTGTGAAACC‑GGGTTGAAGATACGGAAATAGGGCACCGCGTCGGTGCCGGTGGAAGCACT‑CCACTGCCAACCCCCGTTGTTGGCGGCCAGGTCGCCGTCTAT‑CAGGTGGCGCATGAA‑‑GTGCCGCTCGCCCTTGCGCCAGTCAATCAGCAGGTTCTTGCTGAGGAACATGGCCACGACCATGC > NC_002947/857493‑857781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |