| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,017,354 | T→A | 7.2% | intergenic (‑249/+28) | PP_0876 ← / ← PP_5461 | AraC family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,017,354 | 0 | T | A | 7.2% | 203.7 / 5.2 | 69 | intergenic (‑249/+28) | PP_0876/PP_5461 | AraC family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (33/31); new base A (2/3); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.20e-01 | |||||||||||
ATACAACTGGCATGGCGGCTGCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGTATATAAATTGTA > NC_002947/1017207‑1017499 | aTACAACTGGCATGGCGGCTGCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCtt > 8:42574/1‑149 (MQ=255) tACAACTGGCATGGCGGCTGCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCttt < 2:209640/149‑1 (MQ=255) gCATGGCGGCTGCACCTTTCTTGTCACCATCGATCTAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCAAAGCGGccc < 4:331909/148‑1 (MQ=255) gcggcTGCACCTTTCTTGTCACCATCGATCAAGCAGAAAGGCCATGCGCGCGATACTGCTGTGGATCATTGGGGTCCCGATCCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCAAAGCGGcccccaa < 4:197321/147‑5 (MQ=255) gcTGCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTAc < 5:351899/149‑1 (MQ=255) gCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACaa > 4:141808/1‑148 (MQ=255) cACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAAc > 7:228841/1‑148 (MQ=255) cACCTTCCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACaa < 3:160060/147‑1 (MQ=255) cTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCtt < 3:334588/149‑1 (MQ=255) ttGTCACCATCGCTCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTa < 4:37042/149‑1 (MQ=255) cACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACaa > 6:123534/1‑148 (MQ=255) aCCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACaa > 2:291398/1‑147 (MQ=255) aCCATCGATCAAGGAGAAAGGCCATGCGCTCGATACCGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACaa > 7:359984/1‑147 (MQ=255) ccATCGATCAAGGAGAAAGGCCATGCGCTCGATTCTGCTTTGGATGATTGTGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAg < 7:248398/149‑1 (MQ=255) ccATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAg < 5:213620/149‑1 (MQ=255) ccATCGATCAAGGAGAAAGGCCATGCGCACGAAAATGATTTCGATGAATGGGGTGCCGATTCCGGTGATAATTCTGATCTGGTTCTTTTTGGAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAg > 7:355714/1‑149 (MQ=255) cATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAgg > 8:205730/1‑149 (MQ=255) tCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCg > 3:104708/1‑149 (MQ=255) gATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCgt < 2:222449/148‑1 (MQ=255) aTCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTg < 1:16183/110‑1 (MQ=255) aTCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTg > 2:16183/1‑110 (MQ=255) aTCAAGGAGAAAGGCCATGCGCTCGATACCGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCgtgt < 8:359984/149‑1 (MQ=255) aTCAAGGACAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGCTGATCATACTGATCTGGTTCTTTATGCAA‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCgtgt > 5:401500/1‑149 (MQ=255) aGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCaa < 3:141808/149‑1 (MQ=255) ggAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAg > 2:177453/1‑149 (MQ=255) gagaAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAgg > 5:266086/1‑149 (MQ=255) aaaGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAg > 2:303654/1‑149 (MQ=255) aaaGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAg > 4:358743/1‑149 (MQ=255) aaaGGCCATGCGCTCGATACTGCTTTGGATGATTAGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTa > 6:310475/1‑128 (MQ=255) aaaGGCCATGCGCTCGATACTGCTTTGGATGATTAGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTa < 5:310475/128‑1 (MQ=255) aaGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAgg < 5:123534/149‑1 (MQ=255) gcTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGt > 7:164864/1‑149 (MQ=255) gcTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGt < 1:291398/149‑1 (MQ=255) cTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCATCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTc > 4:367572/1‑149 (MQ=255) cTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTg < 1:283424/149‑1 (MQ=255) cTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTga < 7:321006/147‑1 (MQ=255) cTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTga < 8:164864/147‑1 (MQ=255) ttGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGATTTGCGGCACTTTTGATACAAATCTTCGCTACAAAAGGCGTGTGCAAGGCAGGTCCCGGATGTAGTGATTGAGAt > 5:215219/1‑148 (MQ=255) gatgatTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAAt < 5:89700/149‑1 (MQ=255) gggTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAg > 5:165643/1‑149 (MQ=255) gagTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAg > 2:299254/3‑149 (MQ=255) tGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGttt < 6:81281/149‑1 (MQ=255) ccGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTgg < 6:266086/149‑1 (MQ=255) ccGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTg < 7:42574/148‑1 (MQ=255) ttCCGGTGATCATTCTGATCTGGTTCTTTATGCATGTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGATAAAAATATTGGATAAAAATGGCGTTTGAAAGGCAGGGCCCGTATGTCGGGATTGAGATAAATAAATCAATTTTgtttt > 1:268795/1‑145 (MQ=255) gTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCtgat > 2:61285/1‑149 (MQ=255) aTCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATa > 4:37314/1‑125 (MQ=255) aTCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATa < 3:37314/125‑1 (MQ=255) tCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGaa < 8:228841/148‑1 (MQ=255) tCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGaa < 7:205730/148‑1 (MQ=255) gATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCaaa < 4:104708/148‑1 (MQ=255) tGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTgg < 5:270235/125‑1 (MQ=255) tGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTgg > 6:270235/1‑125 (MQ=255) tATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCtgat < 8:180438/126‑1 (MQ=255) tATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCtgat > 7:180438/1‑126 (MQ=255) tATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACa < 1:61285/148‑1 (MQ=255) tATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACAt > 1:265041/1‑149 (MQ=255) aTGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACAtt > 6:224936/1‑149 (MQ=255) cAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTttc < 3:358743/149‑1 (MQ=255) aT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTttct > 8:376201/1‑149 (MQ=255) t‑tGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATACAGTTTGGTGTTCTGATGAACACAAAAGTCCTCGTTACATTttctt > 8:342354/1‑149 (MQ=255) tGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAAATCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCAAGTATGGTGTTCTGATGAACACCAAAGGCCTCGAGACATTttcttc > 4:290109/1‑149 (MQ=255) agaTTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCgg > 7:313964/1‑149 (MQ=255) agaTTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCg < 1:299254/148‑1 (MQ=255) aTTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCtt < 1:157007/84‑1 (MQ=255) tttGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGtata > 7:272904/1‑149 (MQ=255) aaaagggCCGCAAAGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGtata > 8:108302/5‑148 (MQ=255) aaaagggCCGCAAAGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGt > 2:116425/5‑145 (MQ=255) aaaagggCCGCAAAGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGt < 1:116425/141‑1 (MQ=255) gggCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGTATATAAAt < 6:401500/149‑1 (MQ=255) cGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGTATATAAATTGTa > 2:19278/1‑149 (MQ=255) | ATACAACTGGCATGGCGGCTGCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCAT‑TGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGTATATAAATTGTA > NC_002947/1017207‑1017499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |