Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,017,356 T→A 7.1% intergenic (‑251/+26) PP_0876 ← / ← PP_5461 AraC family transcriptional regulator/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,017,3560TA 7.1% 211.6 / 3.9 69intergenic (‑251/+26)PP_0876/PP_5461AraC family transcriptional regulator/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (33/31);  new base A (2/3);  total (35/34)
Fisher's exact test for biased strand distribution p-value = 6.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

TACAACTGGCATGGCGGCTGCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGTATATAAATTGTA  >  NC_002947/1017208‑1017499
                                                                                                                                                     |                                                                                                                                               
tACAACTGGCATGGCGGCTGCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCttt                                                                                                                                                 <  2:209640/149‑1 (MQ=255)
        gCATGGCGGCTGCACCTTTCTTGTCACCATCGATCTAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCAAAGCGGccc                                                                                                                                          <  4:331909/148‑1 (MQ=255)
             gcggcTGCACCTTTCTTGTCACCATCGATCAAGCAGAAAGGCCATGCGCGCGATACTGCTGTGGATCATTGGGGTCCCGATCCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCAAAGCGGcccccaa                                                                                                                                      <  4:197321/147‑5 (MQ=255)
                gcTGCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTAc                                                                                                                                 <  5:351899/149‑1 (MQ=255)
                   gCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACaa                                                                                                                               >  4:141808/1‑148 (MQ=255)
                    cACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAAc                                                                                                                              >  7:228841/1‑148 (MQ=255)
                    cACCTTCCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACaa                                                                                                                               <  3:160060/147‑1 (MQ=255)
                       cTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCtt                                                                                                                          <  3:334588/149‑1 (MQ=255)
                            ttGTCACCATCGCTCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTa                                                                                                                     <  4:37042/149‑1 (MQ=255)
                                cACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACaa                                                                                                                  >  6:123534/1‑148 (MQ=255)
                                 aCCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACaa                                                                                                                  >  2:291398/1‑147 (MQ=255)
                                 aCCATCGATCAAGGAGAAAGGCCATGCGCTCGATACCGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACaa                                                                                                                  >  7:359984/1‑147 (MQ=255)
                                  ccATCGATCAAGGAGAAAGGCCATGCGCTCGATTCTGCTTTGGATGATTGTGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAg                                                                                                               <  7:248398/149‑1 (MQ=255)
                                  ccATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAg                                                                                                               <  5:213620/149‑1 (MQ=255)
                                  ccATCGATCAAGGAGAAAGGCCATGCGCACGAAAATGATTTCGATGAATGGGGTGCCGATTCCGGTGATAATTCTGATCTGGTTCTTTTTGGATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAg                                                                                                               >  7:355714/1‑149 (MQ=255)
                                   cATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAgg                                                                                                              >  8:205730/1‑149 (MQ=255)
                                     tCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCg                                                                                                            >  3:104708/1‑149 (MQ=255)
                                       gATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCgt                                                                                                           <  2:222449/148‑1 (MQ=255)
                                        aTCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTg                                                                                                                                                >  2:16183/1‑110 (MQ=255)
                                        aTCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTg                                                                                                                                                <  1:16183/110‑1 (MQ=255)
                                        aTCAAGGAGAAAGGCCATGCGCTCGATACCGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCgtgt                                                                                                         <  8:359984/149‑1 (MQ=255)
                                        aTCAAGGACAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGCTGATCATACTGATCTGGTTCTTTATGCAATGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCgtgt                                                                                                         >  5:401500/1‑149 (MQ=255)
                                            aGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCaa                                                                                                     <  3:141808/149‑1 (MQ=255)
                                             ggAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAg                                                                                                    >  2:177453/1‑149 (MQ=255)
                                              gagaAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAgg                                                                                                   >  5:266086/1‑149 (MQ=255)
                                                 aaaGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAg                                                                                                >  2:303654/1‑149 (MQ=255)
                                                 aaaGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAg                                                                                                >  4:358743/1‑149 (MQ=255)
                                                 aaaGGCCATGCGCTCGATACTGCTTTGGATGATTAGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTa                                                                                                                     >  6:310475/1‑128 (MQ=255)
                                                 aaaGGCCATGCGCTCGATACTGCTTTGGATGATTAGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTa                                                                                                                     <  5:310475/128‑1 (MQ=255)
                                                  aaGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAgg                                                                                               <  5:123534/149‑1 (MQ=255)
                                                            gcTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGt                                                                                     >  7:164864/1‑149 (MQ=255)
                                                            gcTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGt                                                                                     <  1:291398/149‑1 (MQ=255)
                                                             cTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCATCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTc                                                                                    >  4:367572/1‑149 (MQ=255)
                                                                    cTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTg                                                                             <  1:283424/149‑1 (MQ=255)
                                                                       cTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTga                                                                            <  7:321006/147‑1 (MQ=255)
                                                                       cTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTga                                                                            <  8:164864/147‑1 (MQ=255)
                                                                         ttGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGATTTGCGGCACTTTTGATACAAATCTTCGCTACAAAAGGCGTGTGCAAGGCAGGTCCCGGATGTAGTGATTGAGAt                                                                         >  5:215219/1‑148 (MQ=255)
                                                                            gatgatTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAAt                                                                     <  5:89700/149‑1 (MQ=255)
                                                                                    gggTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAg                                                             >  5:165643/1‑149 (MQ=255)
                                                                                    gagTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAg                                                             >  2:299254/3‑149 (MQ=255)
                                                                                       tGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGttt                                                          <  6:81281/149‑1 (MQ=255)
                                                                                         ccGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTgg                                                        <  6:266086/149‑1 (MQ=255)
                                                                                         ccGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTg                                                         <  7:42574/148‑1 (MQ=255)
                                                                                             ttCCGGTGATCATTCTGATCTGGTTCTTTATGCATGTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGATAAAAATATTGGATAAAAATGGCGTTTGAAAGGCAGGGCCCGTATGTCGGGATTGAGATAAATAAATCAATTTTgtttt                                                     >  1:268795/1‑145 (MQ=255)
                                                                                                  gTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCtgat                                               >  2:61285/1‑149 (MQ=255)
                                                                                                     aTCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATa                                                                    >  4:37314/1‑125 (MQ=255)
                                                                                                     aTCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATa                                                                    <  3:37314/125‑1 (MQ=255)
                                                                                                      tCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGaa                                            <  7:205730/148‑1 (MQ=255)
                                                                                                      tCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGaa                                            <  8:228841/148‑1 (MQ=255)
                                                                                                             gATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCaaa                                     <  4:104708/148‑1 (MQ=255)
                                                                                                                 tGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTgg                                                        >  6:270235/1‑125 (MQ=255)
                                                                                                                 tGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTgg                                                        <  5:270235/125‑1 (MQ=255)
                                                                                                                         tATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCtgat                                               >  7:180438/1‑126 (MQ=255)
                                                                                                                         tATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCtgat                                               <  8:180438/126‑1 (MQ=255)
                                                                                                                         tATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACa                         <  1:61285/148‑1 (MQ=255)
                                                                                                                         tATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACAt                        >  1:265041/1‑149 (MQ=255)
                                                                                                                          aTGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACAtt                       >  6:224936/1‑149 (MQ=255)
                                                                                                                             cATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTttc                    <  3:358743/149‑1 (MQ=255)
                                                                                                                              aTTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTttct                   >  8:376201/1‑149 (MQ=255)
                                                                                                                               ttGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATACAGTTTGGTGTTCTGATGAACACAAAAGTCCTCGTTACATTttctt                  >  8:342354/1‑149 (MQ=255)
                                                                                                                                 tGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAAATCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCAAGTATGGTGTTCTGATGAACACCAAAGGCCTCGAGACATTttcttc                 >  4:290109/1‑149 (MQ=255)
                                                                                                                                   agaTTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCgg               >  7:313964/1‑149 (MQ=255)
                                                                                                                                   agaTTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCg                <  1:299254/148‑1 (MQ=255)
                                                                                                                                     aTTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCtt                                                                              <  1:157007/84‑1 (MQ=255)
                                                                                                                                       tttGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGtata           >  7:272904/1‑149 (MQ=255)
                                                                                                                                        aaaagggCCGCAAAGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGtata           >  8:108302/5‑148 (MQ=255)
                                                                                                                                        aaaagggCCGCAAAGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGt              >  2:116425/5‑145 (MQ=255)
                                                                                                                                        aaaagggCCGCAAAGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGt              <  1:116425/141‑1 (MQ=255)
                                                                                                                                            gggCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGTATATAAAt      <  6:401500/149‑1 (MQ=255)
                                                                                                                                                cGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGTATATAAATTGTa  >  2:19278/1‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                               
TACAACTGGCATGGCGGCTGCACCTTTCTTGTCACCATCGATCAAGGAGAAAGGCCATGCGCTCGATACTGCTTTGGATGATTGGGGTGCCGATTCCGGTGATCATTCTGATCTGGTTCTTTATGCATTGAGATTTTGGGGGCCGCTTTGCGGCCCTTTTGCTACAACTCTTCGCTACAAAAGGCGTGTGCAAGGCAGGGCCCGGATGTCGGGCTTGAGATCAATAAATCCAGTTTGGTGTTCTGATGAACACCAAAGGCCTCGTGACATTTTCTTCGGTATATAAATTGTA  >  NC_002947/1017208‑1017499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: