| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,054,466 | G→T | 6.9% | intergenic (‑3/+34) | PP_0912 ← / ← PP_0913 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,054,466 | 0 | G | T | 6.9% | 309.4 / 9.3 | 96 | intergenic (‑3/+34) | PP_0912/PP_0913 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (45/44); new base T (5/2); total (50/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.76e-01 | |||||||||||
TTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTCCCGCACAACC > NC_002947/1054322‑1054614 | ttCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCg > 7:328299/1‑149 (MQ=255)ttCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCg < 7:74890/149‑1 (MQ=255) cGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCgg < 1:339884/148‑1 (MQ=255) cGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCgg < 3:32513/148‑1 (MQ=255) ggCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCggg < 5:187074/148‑1 (MQ=255) cTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCGACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCAGGAACAAGGCCGGGCGtt > 5:369332/1‑149 (MQ=255) ttCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGttt > 2:135827/1‑149 (MQ=255) ccccAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑TAAAACGCCCGGCACAAGGCCGGGCGTTTGCgg < 8:232496/149‑1 (MQ=255) cccAGACATCAAGAAGCTGCTGCACTGTGCCTCATGTTAGGTTTGATCGAAGGCATACAGTATGCGCATCTGCGTGCACGCCCGGCTGCGGGAAGCGTTTTACCCGGCTGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGt < 6:276629/149‑1 (MQ=255) ccAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTTCgttt < 7:320135/149‑4 (MQ=255) ccAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTg < 3:337458/149‑1 (MQ=255) cAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTg > 6:91761/1‑148 (MQ=255) aGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGaa < 5:409664/149‑1 (MQ=255) aCATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAgc < 4:237525/149‑1 (MQ=255) tCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTg > 8:111878/1‑137 (MQ=255) tCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTg < 7:111878/137‑1 (MQ=255) aaGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTa > 8:346648/1‑148 (MQ=255) aaGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTa > 6:287552/1‑148 (MQ=255) gcagcaCTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCCTTGTGCCGGGCGTTTTCgtt < 4:74662/131‑3 (MQ=38) gcagcaCTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCCTTGTGCCGGGCGTTTTCgtt > 3:74662/1‑129 (MQ=38) caCTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGTGCTACAGCAGGATCAg > 4:347712/1‑148 (MQ=255) caCTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAg > 1:88456/1‑148 (MQ=255) cctcctGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCg < 3:163610/118‑1 (MQ=255) cctcctGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCg > 4:163610/1‑118 (MQ=255) ctcctGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCa < 2:58701/139‑1 (MQ=255) ctcctGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCa > 1:58701/1‑139 (MQ=255) tcctGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGt > 6:49845/1‑118 (MQ=255) tcctGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGt < 5:49845/118‑1 (MQ=255) cctGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATc > 2:291238/1‑149 (MQ=255) ctGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGAt < 8:338248/147‑1 (MQ=255) aTCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGTGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCgg < 3:347712/148‑1 (MQ=255) aTCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCgg < 8:328299/148‑1 (MQ=255) tCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGt > 4:52004/1‑149 (MQ=255) gAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGtt > 6:145234/1‑148 (MQ=255) gAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACCCGTGATCCGCAGTGTCCGGGTTc < 2:88456/149‑1 (MQ=255) ccTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGtt < 3:52004/149‑1 (MQ=255) cTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTg > 8:147019/1‑149 (MQ=255) cTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGACACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTg > 8:237027/1‑149 (MQ=255) aGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCaa > 8:5668/1‑149 (MQ=255) gATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGTCACATGGCCGGGCGTTTGCGGTGAAGCGCTACAGCATGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAg < 7:226542/139‑1 (MQ=255) gATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATg > 1:132896/1‑149 (MQ=255) gATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATg > 6:242184/1‑149 (MQ=255) gATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATg < 7:121099/149‑1 (MQ=255) gATGAGCATCTGCGTGCAAGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGAACAAGGCCGGGAGTTTGCGGTGAAGCGCTACAGCATGATCAGAACTCGTGATACGCAGTTTCAGGGTTCAg > 8:226542/1‑139 (MQ=255) tGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTa < 8:104636/96‑1 (MQ=255) tGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTa > 7:104636/1‑96 (MQ=255) gAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGcc < 6:317430/148‑1 (MQ=255) aTCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCt > 8:242064/1‑149 (MQ=255) tCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCtt > 8:380926/1‑149 (MQ=255) cTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTg > 3:47660/1‑149 (MQ=255) gTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAgg < 5:91464/127‑1 (MQ=255) gTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAgg > 6:91464/1‑127 (MQ=255) gCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCg < 7:325790/101‑1 (MQ=255) gCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCg > 8:325790/1‑101 (MQ=255) gCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCg > 3:292355/1‑147 (MQ=255) gCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCa > 2:189759/1‑149 (MQ=255) cACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGc > 4:231102/1‑129 (MQ=255) cACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGc < 3:231102/129‑1 (MQ=255) cACGCCAGGCAGCGGGAAGCGTTTTACCCGGCACCAAACTTAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCa < 1:135827/149‑1 (MQ=255) aCGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGc < 2:11337/149‑1 (MQ=255) cAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGcc > 4:68180/1‑130 (MQ=255) cAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGcc < 3:68180/130‑1 (MQ=255) aGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGtt < 7:242064/149‑1 (MQ=255) ggCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCa > 8:276827/1‑102 (MQ=255) ggCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCa < 7:276827/102‑1 (MQ=255) cAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTtcga < 5:364423/149‑1 (MQ=255) gCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTtcgatc < 5:287552/149‑1 (MQ=255) ggAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCt > 1:316293/1‑138 (MQ=255) ggAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCt < 2:316293/138‑1 (MQ=255) aaGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGAccc > 2:395547/1‑149 (MQ=255) gTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTc < 5:145234/149‑1 (MQ=255) tACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGc < 4:47660/148‑1 (MQ=255) ccGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGa > 6:335885/1‑149 (MQ=255) ccGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGa > 6:143609/1‑149 (MQ=255) agcaAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAgg < 7:147019/149‑1 (MQ=255) gccc‑GAAAACGCCCGGCACCAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGc < 6:105764/105‑1 (MQ=255) aaaC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGggcg > 1:319522/1‑149 (MQ=255) aC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGggcggc < 1:189759/149‑1 (MQ=255) aC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCACAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGggcggc > 3:133022/1‑149 (MQ=255) ccgcaaaCGCCCGGCCTTGTGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATACGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGggcggc > 7:62045/5‑149 (MQ=255) cgcaaaCGCCCGGCCTTGTGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTc > 1:354369/4‑83 (MQ=25) cgcaaaCGCCCGGCCTTGTGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTc < 2:354369/80‑1 (MQ=25) gcaaaCGCCCGGCCTTGTGCCGGGCGTTTTCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGa > 2:84610/3‑149 (MQ=255) gcaaaCGCCCGGCCTTGTGCCGGGCGTTTTCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGa > 2:90276/3‑149 (MQ=255) aaaCGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATg > 6:199269/1‑149 (MQ=255) aCGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGAcc < 3:67183/121‑1 (MQ=255) aCGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGAcc > 4:67183/1‑121 (MQ=255) gCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGt > 7:4049/1‑149 (MQ=255) gCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGt > 2:356661/1‑149 (MQ=255) cccGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTc < 7:380926/149‑1 (MQ=255) cccGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTc < 8:4049/149‑1 (MQ=255) ccGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTcc > 3:348829/1‑149 (MQ=255) ggCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTCCCg < 7:346648/149‑1 (MQ=255) acaAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGa > 6:391532/1‑136 (MQ=255) acaAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGa < 5:391532/136‑1 (MQ=255) acaAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTCCCGca > 1:115564/1‑148 (MQ=255) ggCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTCCCGCACAAcc < 5:143609/149‑1 (MQ=255) | TTCGGCCTTCGCCCCAGACATCAAGAATCTGCAGCACTGTGCCTCCTGTTAGGTTTGATCGAAGGCCTACAGGATGAGCATCTGCGTGCACGCCAGGCAGCGGGAAGCGTTTTACCCGGCAGCAAAC‑GAAAACGCCCGGCACAAGGCCGGGCGTTTGCGGTGAAGCGCTACAGCAGGATCAGAACTCGTGATCCGCAGTGTCCGGGTTCAGGTTGGCAATGCCCAGCTTGCCCGCAGCCTGTTCGATCGACCCGGTCTGCTTGACCAGGGCGGCGATGGCGTCCCGCACAACC > NC_002947/1054322‑1054614 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |