| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,075,493 | C→G | 5.9% | H71D (CAT→GAT) | mreB → | cell wall structural actin‑like protein MreB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,075,493 | 0 | C | G | 5.9% | 270.7 / 6.8 | 85 | H71D (CAT→GAT) | mreB | cell wall structural actin‑like protein MreB |
| Reads supporting (aligned to +/- strand): ref base C (42/38); new base G (3/2); total (45/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.18e-01 | |||||||||||
CCCAGGGTCACTTTCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCAGCGTCTGCGAAAAAATGTTGCAATATTTTA > NC_002947/1075347‑1075640 | cccAGGGTCACTTTCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCAt > 4:293663/1‑149 (MQ=255)cccAGGGTCACTTTCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCAt < 2:107951/149‑1 (MQ=255)cccAGGGTCACTTTCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGAGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTAACCAt > 8:51134/1‑149 (MQ=255) ccagtttCACTTTCCCATGTTCAAGAATCTGCGTTGCATGTTTTCGATCGATCTTTCTATCGTTCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATg < 8:191339/143‑1 (MQ=255) cAGGGTCACTTTCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATgg < 6:130963/149‑1 (MQ=255) aGGGTCACTTTCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGATCGCGGTATCGTC‑CTGAATGATCCCTCGGTTGTTGCCATCCGTACCCATGGc < 7:51134/149‑1 (MQ=255) gTCACTTTCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAAc < 2:336537/149‑1 (MQ=255) cTTTCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGa < 8:9151/149‑1 (MQ=255) tCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGaa < 5:176818/147‑1 (MQ=255) ccATGTTCACGACACTGCGGGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGc < 6:18427/149‑1 (MQ=255) cATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGcg > 4:230833/1‑149 (MQ=255) cATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGAGCGTGAGCGCGGTATCGACTGGGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGc > 1:132232/1‑149 (MQ=255) gTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGaaaa < 7:41349/143‑1 (MQ=255) gTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGaaaa > 8:41349/1‑143 (MQ=255) gTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGcgtcg > 4:132606/1‑149 (MQ=255) ttCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGcgtcgt > 7:121225/1‑149 (MQ=255) aaGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTAccc > 4:203982/1‑124 (MQ=255) aaGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTAccc < 3:203982/124‑1 (MQ=255) aaGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATg > 4:234552/1‑127 (MQ=255) aaGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATg < 3:234552/127‑1 (MQ=255) aaGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCgtcgtc > 5:284263/1‑147 (MQ=255) aaGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCgtcgtc < 6:284263/147‑1 (MQ=255) aaGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGtcgtcg < 3:293663/148‑1 (MQ=255) aaGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGc > 4:352193/1‑149 (MQ=255) gCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCg > 2:55678/1‑147 (MQ=255) aTGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGc > 7:188128/1‑149 (MQ=255) gTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGcgtc > 4:41519/1‑127 (MQ=255) gTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGcgtc < 3:41519/127‑1 (MQ=255) tCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAAc < 3:352193/148‑1 (MQ=255) gCGATCTTTCTATCGATCACGGTACTGCAAACACCCTTATTTACGTGCGTGAGCGAGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAACGTCCTAGCCGTCCGTACCGAAGCCAAACGCaag > 4:259056/1‑147 (MQ=255) cGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGc < 4:19485/149‑1 (MQ=255) tttCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGc > 1:351595/1‑140 (MQ=255) tttCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGc < 2:351595/140‑1 (MQ=255) tATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGc > 2:16162/1‑106 (MQ=255) tATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGc < 1:16162/106‑1 (MQ=255) aTCTGGGTACTGCCAACACCCTTATTTACATGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGccc > 6:420826/1‑149 (MQ=255) tACTGCCAACACCCTTATTTACGTGCGTGAGCGAGGTATCGTA‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTAACCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCTAAGCCAAACGCATGCTGGGCCGTACGCCCCGCAAc > 6:253645/1‑148 (MQ=255) cAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGc < 2:380561/76‑1 (MQ=255) cAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGc > 1:380561/1‑76 (MQ=255) cAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGGCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAg < 4:360906/149‑1 (MQ=255) agacCCTTATTTACGTGCGTGATCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCAAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGcc < 3:259056/147‑1 (MQ=255) ccTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCTGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGaa < 3:63811/103‑1 (MQ=255) ccTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTTTTGCCATCCGTACCCATGGCAACCAGAAAAGCTTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGTCCGTACGCCCGGCAACATTGCAGCCATTc < 5:253645/149‑1 (MQ=255) ccTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCTAAGCCAAACGCATGCTGGGCCGTACGCCCGGCCACATTGCAGCCATTc > 7:276338/1‑149 (MQ=255) ccTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGACATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGaa > 4:63811/1‑103 (MQ=255) ttATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGcgtc < 8:365638/83‑1 (MQ=255) ttATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGcgtc > 7:365638/1‑83 (MQ=255) ttATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGt > 6:421129/1‑149 (MQ=255) aTTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGt < 3:230833/147‑1 (MQ=255) tttACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTcc < 8:188128/148‑1 (MQ=255) gtgcgtgAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACAtt < 1:150744/129‑1 (MQ=255) gtgcgtgAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACAtt > 2:150744/1‑129 (MQ=255) gtgcgtgAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATg > 2:327695/1‑147 (MQ=255) gggtgAGGGGGTTATGGTC‑CTTAAGTAGCCCTGGGTTGTTGCCATCCGTACCCATGGCAACAATAAATGCGTCGTCGCCGTCGGTACCTATGCCAAACGAATGCTGGGCGGTAGGCCGGGAAACATTGCAGCCATTCGTCGGATGAAg < 2:37467/146‑1 (MQ=255) gcgtgAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAg > 8:333948/1‑148 (MQ=255) gcgtgAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAg > 1:37467/1‑148 (MQ=255) gcgtgAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAg > 2:269629/1‑148 (MQ=255) gtgAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGAc > 1:310229/1‑149 (MQ=255) gAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATg > 7:9395/1‑141 (MQ=255) gAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATg < 8:9395/141‑1 (MQ=255) gAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGAc < 7:333948/147‑1 (MQ=255) aGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAATCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACgg < 2:254685/148‑1 (MQ=255) gcgGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCAt > 1:348862/1‑127 (MQ=255) gcgGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCAt < 2:348862/127‑1 (MQ=255) tC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGAc > 8:265881/1‑149 (MQ=255) tC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGAc > 4:391703/1‑149 (MQ=255) tC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCCTCATTGCCGAc > 3:382868/1‑149 (MQ=255) cTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACtt > 5:128125/1‑149 (MQ=255) cTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACtt < 3:132606/149‑1 (MQ=255) cTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACtt < 3:391703/149‑1 (MQ=255) gAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCCAAGAAGGACCGCGTCATTGCCGACtt > 8:126692/1‑147 (MQ=255) gAATGAACCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACtt > 5:398793/1‑147 (MQ=255) aaTGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCa < 2:132232/148‑1 (MQ=255) aaTGAACCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCa < 6:398793/148‑1 (MQ=255) cTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACTCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCAGCGTCTGc > 8:229605/1‑148 (MQ=255) ttgttgCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCAGCGTCTGCGaaaa > 6:339432/1‑148 (MQ=255) gttgCCATGGGTACGGATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACAt < 5:174676/89‑1 (MQ=39) gttgCCATGGGTACGGATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACAt > 6:174676/1‑89 (MQ=39) gttgCCATGGGTACGGATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGcc < 3:159830/126‑1 (MQ=255) gttgCCATGGGTACGGATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGcc > 4:159830/1‑126 (MQ=255) gttgCCATGGGTACGGATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCAGCGTCTGCGAAAAAAt > 2:281528/1‑149 (MQ=255) tgCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGc > 1:403684/1‑123 (MQ=255) tgCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGc < 2:403684/123‑1 (MQ=255) ccATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGAt > 7:70424/1‑103 (MQ=255) ccATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGAt < 8:70424/103‑1 (MQ=255) ccATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCAGCGTCTGCGAAAAAATGtt < 7:126692/148‑1 (MQ=255) ccATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCAGCGTCTGCGAAAAAATGTTg > 1:243230/1‑149 (MQ=255) ccATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCAGCATCTGCGAAAAAATGTTGCAATATTTTa < 2:310229/149‑1 (MQ=255) | CCCAGGGTCACTTTCCCATGTTCAAGAAACTGCGTGGCATGTTTTCCAGCGATCTTTCTATCGATCTGGGTACTGCCAACACCCTTATTTACGTGCGTGAGCGCGGTATCGTC‑CTGAATGAGCCCTCGGTTGTTGCCATCCGTACCCATGGCAACCAGAAAAGCGTCGTCGCCGTCGGTACCGAAGCCAAACGCATGCTGGGCCGTACGCCCGGCAACATTGCAGCCATTCGTCCGATGAAGGACGGCGTCATTGCCGACTTCAGCGTCTGCGAAAAAATGTTGCAATATTTTA > NC_002947/1075347‑1075640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |