| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,243,069 | G→T | 6.3% | intergenic (‑185/‑40) | PP_1083 ← / → tsaA | (2Fe‑2S)‑binding protein/peroxiredoxin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,243,069 | 0 | G | T | 6.3% | 255.0 / 3.4 | 77 | intergenic (‑185/‑40) | PP_1083/tsaA | (2Fe‑2S)‑binding protein/peroxiredoxin |
| Reads supporting (aligned to +/- strand): ref base G (40/32); new base T (2/3); total (42/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTTAATGTTAATGAGAATGCTTGTCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCTGGCCTCGGCCATCAAGG > NC_002947/1242922‑1243211 | gCTTAATGTTAATGAGAATGCTTGTCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTgg > 8:383923/1‑149 (MQ=255) atgttaatgAGAATGCTTGTCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCg < 6:186128/148‑1 (MQ=255) aatgAGAATGCTTGTCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCCAGACGGGCTTGCCCGACatc < 8:149143/148‑3 (MQ=255) aatgAGAATGCTTGTCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAAc > 7:30602/1‑149 (MQ=255) atgAGAATGCTTGTCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGAGAGCGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCACGCCCGTCTGGCCCGGCa > 1:332708/1‑148 (MQ=255) gagaATGCTTGTCAAAGATCTTTGTGAGGGTGCTGTGCTTGAGCGACAGGTGGTCGCTTTGTCGA‑‑‑CGGAGTATGCCTGTAATGAGAAGCCGTGTATGATGGTCGGCGTTTGTTGGATGTCGGGCAAGCCCGGATGGACAGGCAAACGGt > 7:174875/1‑149 (MQ=255) tGCTTGTCAAAGATCTTTCTGATGGTGCTGTTCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCTTGTATTATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGTCCCGGCAAACGGTTTTTc < 8:174875/149‑1 (MQ=255) cTTGTCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCa < 2:32961/148‑1 (MQ=255) gTCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCAcc < 8:30602/147‑1 (MQ=255) tCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCg < 1:370136/129‑1 (MQ=255) tCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCg > 2:370136/1‑129 (MQ=255) tCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGtttt < 4:293241/141‑1 (MQ=255) tCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGtttt > 3:293241/1‑141 (MQ=255) tCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCtc < 1:354669/149‑1 (MQ=255) aaaGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCAcc < 1:272360/144‑1 (MQ=255) aaaGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCAcc > 2:272360/1‑144 (MQ=255) aaaGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCtcat < 1:194939/149‑1 (MQ=255) cTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCgg > 6:383685/1‑122 (MQ=255) tCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGgaga < 2:180290/147‑1 (MQ=255) tCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGAt < 1:382378/148‑1 (MQ=255) gtgctgtgctTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGa < 6:9364/149‑1 (MQ=255) ctgtgctTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGccc > 4:375804/1‑107 (MQ=255) gctTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACt > 2:377613/1‑149 (MQ=255) ctTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGACGTGTATGATGTTCGTCCTTTGTTGGATGTCGGGCAAGCCCGTCTTGCCCGGCAAAAGGTTTTTCACACTCATCAGGAGATTACAATTAGCGTACTc > 4:10611/1‑149 (MQ=255) acaaaGCGACCACCGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTc > 6:337091/5‑149 (MQ=255) acaaaGCGACCACCGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTc > 1:52814/5‑149 (MQ=255) ttGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCg > 6:421625/1‑149 (MQ=255) ttGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCg > 5:29562/1‑149 (MQ=255) aGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTg > 3:196927/1‑149 (MQ=255) aGCGACCACCGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTg < 5:337091/149‑1 (MQ=255) gCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTgg < 5:421625/149‑1 (MQ=255) gCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTg < 3:171408/148‑1 (MQ=255) gACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAg < 8:317842/121‑1 (MQ=255) gACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAg > 7:317842/1‑121 (MQ=255) aCCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGCCGGGCCAGACGGGCTTGCCCGACatc < 2:394373/100‑3 (MQ=37) aCCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGCCGGGCCAGACGGGCTTGCCCGACatc > 1:394373/1‑98 (MQ=37) cTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGccccc > 2:154310/1‑148 (MQ=255) ttGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGAt > 1:61033/1‑149 (MQ=255) cGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTc < 1:377613/148‑1 (MQ=255) gA‑‑‑CGTAGTCTGCCTGTCATTAGAAGCCGTGTATGATGGTCTGCCTTTGTTGGATGTCGGGCAAGCCCGTCTTGCCCGGCAAACGGTTTTTCACCCTCATCAGGATATTACAATTAGCGTACTAGTTGGTAAGAAAGCCCCCGATTTCa < 3:10611/148‑1 (MQ=255) gA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCAc > 4:27373/1‑149 (MQ=255) a‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCAcc > 7:216004/1‑149 (MQ=255) tCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGc < 7:383923/148‑1 (MQ=255) aTGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTgg < 6:29562/149‑1 (MQ=255) tGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGc > 7:159935/1‑99 (MQ=255) tGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGc < 8:159935/99‑1 (MQ=255) tGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTggg < 6:362555/149‑1 (MQ=255) gaAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCa > 1:299020/1‑127 (MQ=255) gaAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCa < 2:299020/127‑1 (MQ=255) cGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGc > 6:226668/1‑148 (MQ=255) gtgtATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCga > 6:397240/1‑149 (MQ=255) tgtATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGc > 5:271616/1‑146 (MQ=255) gatgGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGAtcgt > 1:21680/1‑149 (MQ=255) atgGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGAtcgtc < 1:154310/149‑1 (MQ=255) atgGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGAtcgtc < 5:226668/149‑1 (MQ=255) atgGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGAtcgt < 2:21680/148‑1 (MQ=255) tgGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGAtcgtc > 7:297026/1‑148 (MQ=255) ccTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGt > 6:401717/1‑83 (MQ=255) ccTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCtt > 3:344909/1‑149 (MQ=255) cTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCTTCGATAGCtt > 7:386644/1‑148 (MQ=255) tttGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGttt < 2:80397/44‑1 (MQ=255) tttGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGttt > 1:80397/1‑44 (MQ=255) tttGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTc > 8:321712/1‑148 (MQ=255) gttgGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAAc < 4:196927/148‑1 (MQ=255) ttgGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGga > 4:252559/1‑56 (MQ=255) ttgGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGga < 3:252559/56‑1 (MQ=255) ttgGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCt > 4:225658/1‑149 (MQ=255) ttagATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCt > 3:291980/4‑149 (MQ=255) tgGATGTCGTGCAAGCGCGTCTGTCCGGGAAAATTGTTTTTCAGATTCATCAGGAGTTTAGAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACAGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCTATAGCTTCAACCt < 8:386644/148‑1 (MQ=255) gATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCTGGc > 4:315698/1‑149 (MQ=255) gATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCTGGc > 4:310042/1‑149 (MQ=255) gggCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCTGGCCTCGGc > 4:375924/1‑149 (MQ=255) aaGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCTGGCCTCGGCCAt > 2:338637/1‑148 (MQ=255) aGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCTGGCCTCGGCCATCa < 5:397240/149‑1 (MQ=255) ccGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCTGGCCTCGGCCATCAAgg > 3:255494/1‑149 (MQ=255) ccGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCTGGCCTCGGCCATCAAgg < 2:61033/149‑1 (MQ=255) gTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGAt < 4:202217/119‑1 (MQ=255) gTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGAt > 3:202217/1‑119 (MQ=255) | GCTTAATGTTAATGAGAATGCTTGTCAAAGATCTTTCTGAGGGTGCTGTGCTTGAGCGACCGGTGGTCGCTTTGTCGA‑‑‑CGGAGTCGGCCTGTCATGAGAAGCCGTGTATGATGGTCGGCCTTTGTTGGATGTCGGGCAAGCCCGTCTGGCCCGGCAAACGGTTTTTCACCCTCATCAGGAGATTACAATGAGCGTACTCGTTGGTAAGAAAGCCCCCGATTTCACCGTTCCGGCCGTGCTGGGCAATGGCGAGATCGTCGATAGCTTCAACCTGGCCTCGGCCATCAAGG > NC_002947/1242922‑1243211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |