| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,294,114 | C→T | 10.1% | intergenic (+15/+25) | pdxH → / ← PP_1130 | pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,294,114 | 0 | C | T | 10.1% | 191.7 / 9.5 | 69 | intergenic (+15/+25) | pdxH/PP_1130 | pyridoxine/pyridoxamine 5'‑phosphate oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (28/34); new base T (3/4); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.11e-01 | |||||||||||
CTGAGCATTGGGGGGGATACCGTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAACGCGCGTTTTTCAGGATCGGCCC > NC_002947/1293966‑1294260 | cTGAGCATTGGGGGGGATACCGTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGgccgcc < 8:127332/149‑1 (MQ=255) gAGCATTGTGGGGGAGACCGTGTGGTGCCCGCGCGCCTCGAGTTCTGGCAGGGGCTGGCAAGTCGTCTGCATGCTCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑aa < 8:233660/149‑1 (MQ=255) gCATTGGGGGGGATACCGTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGc > 2:58665/1‑149 (MQ=255) aTTGGGGGGGATACCGTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCgg > 7:59729/1‑149 (MQ=255) gggggATACCGTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCT‑TGGCGGCCCCa < 8:317131/149‑1 (MQ=255) gggggATACCGTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCa < 3:217264/149‑1 (MQ=255) ggATACCGTTTGTTGCCCGAGCGCATCTAGTTCTGGCAGGGGCGTGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCT‑TTGCGGCCCCAgtt < 8:92579/149‑3 (MQ=255) tACCGTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCAtt < 3:103055/149‑1 (MQ=255) gTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGGCCCAGCCATTGATc < 4:20615/149‑1 (MQ=255) gTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATc < 8:59729/149‑1 (MQ=255) tgttgCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCaa < 2:43744/148‑1 (MQ=255) ccGAGCGGATCGAGGTCTGTCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTAccc < 8:221568/149‑1 (MQ=255) ccGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTAccc > 7:353273/1‑149 (MQ=255) cATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATaa < 1:58665/149‑1 (MQ=255) aTCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCaa < 5:318903/134‑1 (MQ=255) aTCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCaa > 6:318903/1‑134 (MQ=255) tCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAAcc > 5:208840/1‑149 (MQ=255) tCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAAcc > 3:343424/1‑149 (MQ=255) aGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTgc > 6:132534/1‑149 (MQ=255) cTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTgccgc < 2:334894/148‑1 (MQ=255) tGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAAc < 6:91330/140‑1 (MQ=255) tGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAAc > 5:91330/1‑140 (MQ=255) tGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCt > 6:395094/1‑149 (MQ=255) gCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AACCGGCCCCAGACATTGATCAAGCTCCACCGGATAACCTgccgcagag > 8:167306/1‑145 (MQ=255) gCAGGGGCGGGCAAGTCGGCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTc < 8:54716/148‑1 (MQ=255) ggggCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCgg < 6:88549/103‑1 (MQ=255) cgtcTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCAcccc < 7:199279/148‑1 (MQ=255) gtcTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGc < 8:16160/149‑1 (MQ=255) tGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTcgcg > 7:169531/1‑131 (MQ=255) tGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTcgcg < 8:169531/131‑1 (MQ=255) tGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCt < 8:81815/133‑1 (MQ=255) tGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCt > 7:81815/1‑133 (MQ=255) cATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCa < 5:28715/146‑1 (MQ=255) gATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCt > 6:343768/1‑149 (MQ=255) aaCTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAaccac < 6:310397/127‑1 (MQ=255) aaCTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAaccac > 5:310397/1‑127 (MQ=255) cTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCAcc > 4:67990/1‑149 (MQ=255) tATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCAcccc > 3:309123/1‑127 (MQ=255) tATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCAcccc < 4:309123/127‑1 (MQ=255) cGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTcgcg > 3:317508/1‑111 (MQ=255) cGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTcgcg < 4:317508/111‑1 (MQ=255) ggCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTtctc < 6:208840/149‑1 (MQ=255) gtggACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTGGCGCTCCACCCACCCCGCCAGGTGCTTACGCCCCCCCTTCTCCTGcc > 4:59689/1‑149 (MQ=255) gACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCcgc < 8:353273/148‑1 (MQ=255) aCGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCCTAAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCCCCTTCTCCTGCcgcg > 1:308402/1‑149 (MQ=255) cGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGcc < 3:67990/149‑1 (MQ=255) ggCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTg < 5:395094/149‑1 (MQ=255) gCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTgc > 4:187515/1‑149 (MQ=255) gCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTgc > 2:146153/1‑149 (MQ=255) aGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTgcgc < 4:343424/149‑1 (MQ=255) gCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCCCCTGCTCCTGCCGCGCCTGCGCGATCCtt > 5:48750/1‑149 (MQ=255) cGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGc > 2:261689/1‑102 (MQ=255) cGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGc < 1:261689/102‑1 (MQ=255) gagaGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTc < 2:30496/149‑1 (MQ=255) agCGGCTGGCGCGCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGACTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCa < 2:360921/148‑1 (MQ=255) gCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAg > 8:139441/1‑148 (MQ=255) cGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCa < 5:343768/149‑1 (MQ=255) cccTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCCCCTTCTCCTGCCGCGCCTGCGCCCACCGTTCCAGCATGAAcgcgc > 3:78551/1‑149 (MQ=255) cccTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAAcgcgc < 2:308402/149‑1 (MQ=255) tcaatggcTGGGGCCGCT‑TGGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAACGCGCGtt > 3:323682/8‑149 (MQ=255) gAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAATGCGCGttt > 4:85029/1‑149 (MQ=255) cAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAACGCGCGttttt > 1:25520/1‑148 (MQ=255) aaCTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAACGCGCGTTTTTCa < 5:132534/149‑1 (MQ=255) gcTGGGGCCGCT‑TGGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAACGCGCGTTTTTCa < 4:323682/147‑1 (MQ=255) cTGGGGCCGCT‑TGGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTAc < 3:190730/88‑1 (MQ=39) cTGGGGCCGCT‑TGGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTAc > 4:190730/1‑88 (MQ=39) cTGGGGCCGCT‑TGGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAACGCGCGTTTTTCAg > 4:31192/1‑148 (MQ=255) cTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCt > 1:175553/1‑85 (MQ=255) cTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCt < 2:175553/85‑1 (MQ=255) ggCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAACGCGCGTTTTTCAGGATCg < 7:139441/149‑1 (MQ=255) gcc‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAACGCGCGTTTTTCAGGATCGGccc > 5:286577/1‑149 (MQ=255) | CTGAGCATTGGGGGGGATACCGTTTGTTGCCCGAGCGCATCGAGTTCTGGCAGGGGCGGGCAAGTCGTCTGCATGATCGTTTGAACTATCGGCTGGTGGACGGGCAGTGGCTGCGAGAGCGGCTGGCGCCCTGAGCAACTGGGGCCGCC‑AAGCGGCCCCAGCCATTGATCAAGCTACCCCGGATAACCTGCCGCCTCGCGCTCCAACCACCCCGCCAGTTGCTTACGCCCCACCTTCTCCTGCCGCGCCTGCGCCAACCTTTCCAGCATGAACGCGCGTTTTTCAGGATCGGCCC > NC_002947/1293966‑1294260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |