| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,340,033 | C→G | 5.2% | R202G (CGC→GGC) | PP_1164 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,340,033 | 0 | C | G | 5.2% | 251.1 / 3.0 | 76 | R202G (CGC→GGC) | PP_1164 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (36/36); new base G (2/2); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
GTTGAAGGCGCTGCGGGTGGGCAGGGTGCGGCGCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGTGGCAGACGAACTGGC > NC_002947/1339885‑1340175 | gTTGAAGGCGCTGCGGGTGGGCAGGGTGCGGCGCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGgc > 3:157732/1‑149 (MQ=255) aGGCGCTGCGGGTGGGCAGGGTGCGGCGCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTc < 8:226739/149‑1 (MQ=255) aGGCGCTGCGGGTGGGCAGGGTGCGGCGCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTc < 6:310141/149‑1 (MQ=255) tGCGGGTGGGCAGGGTGCGGCGCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGt > 8:84471/1‑148 (MQ=255) gggTGGGCAGGGTGCGGCGCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGAcc > 5:46742/1‑149 (MQ=255) ggTGGGCAGGGTGCGGCGCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACcg > 4:256421/1‑149 (MQ=255) tGGGCAGGGTGCGGCGCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACcgac < 6:233290/149‑1 (MQ=255) cggcgCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCt < 2:106441/148‑1 (MQ=255) gcgcATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTgg > 3:344896/1‑149 (MQ=255) gcgcATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTgg > 3:339279/1‑149 (MQ=255) tgttgtGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGGGACCGACGAGCCGACCTTGGTgcgc < 3:256421/149‑1 (MQ=255) gtgCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAg > 1:93800/1‑149 (MQ=255) tgCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAg < 4:339279/148‑1 (MQ=255) tgCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAg < 4:344896/148‑1 (MQ=255) cTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCcgc > 2:33799/1‑149 (MQ=255) tCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCcgcg > 2:261187/1‑149 (MQ=255) gCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCgg < 8:49017/148‑1 (MQ=255) ccGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACTAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCt > 8:120253/1‑148 (MQ=255) aCTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACg > 2:18654/1‑149 (MQ=255) aCCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCTGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGt > 4:262314/1‑148 (MQ=255) ccTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTgcgc < 8:431/127‑1 (MQ=255) ccTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTgcgc > 7:431/1‑127 (MQ=255) ccTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTc < 2:93800/148‑1 (MQ=255) ccTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGAACCACCAACCTGTCGCCGCGTGCGGGTTGGCGGTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCa < 2:349641/149‑1 (MQ=255) cgcgcCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTgcgc > 4:56879/1‑122 (MQ=255) cgcgcCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTgcgc < 3:56879/122‑1 (MQ=255) cATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGa > 2:42477/1‑149 (MQ=255) tgCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGc > 1:9792/1‑148 (MQ=255) ccGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAAt > 6:75601/1‑149 (MQ=255) ccGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACAGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTCACGGTCACCAGCAATGACGGGGCAAt > 4:203306/1‑149 (MQ=255) ccGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTACGGAGTGACAGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAAt > 6:81431/1‑149 (MQ=255) cGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATc < 1:18654/149‑1 (MQ=255) gAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATc > 1:178831/1‑148 (MQ=255) gAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATc < 2:178831/148‑1 (MQ=255) gAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCg > 1:18300/1‑149 (MQ=255) aaGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCg > 5:213358/1‑148 (MQ=255) aGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCa < 6:46742/149‑1 (MQ=255) gCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCAt > 1:347383/1‑105 (MQ=255) gCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCAt < 2:347383/105‑1 (MQ=255) gCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGTCTGACGGTCACCAGCAATGACGGGGCAATCGCAg < 1:261187/149‑1 (MQ=255) gCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCCGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAg > 7:105948/1‑149 (MQ=255) ccGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGc > 1:385575/1‑149 (MQ=255) cTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGcggcgg > 7:368641/1‑149 (MQ=255) tGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACg > 2:264140/1‑123 (MQ=255) tGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACg < 1:264140/123‑1 (MQ=255) cGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTgg < 2:9792/149‑1 (MQ=255) gggCACGCGCTACGCCGCACCACCAACCGGGCGCCGCGTGCGGGCCGGCGCGTCGGAGTGACCGACGCGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCCGCGGGCTggg < 4:299869/149‑1 (MQ=255) aTGCGATAAACGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGAtt > 6:125992/1‑149 (MQ=255) tGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCgg < 3:82117/91‑1 (MQ=255) tGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCgg > 4:82117/1‑91 (MQ=255) gATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGGGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGccc > 3:328084/1‑149 (MQ=255) gATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGGGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGccc > 3:322480/1‑149 (MQ=255) gATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGccc > 6:270074/1‑149 (MQ=255) aTAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCg < 1:42477/149‑1 (MQ=255) caccacCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGt < 6:213358/149‑1 (MQ=255) accaccAACGTGTCTCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTTGTGCGCAGGAAGCCGCGGCTGACGGTCACCAGCAATGCCGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTc < 5:81431/149‑1 (MQ=255) accaccAACGTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCGGACGGTCACCAGCAATGACGGGGCAATCGCAGCGGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTc < 5:75601/149‑1 (MQ=255) accaccAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGt > 7:146708/1‑62 (MQ=255) accaccAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGt < 8:146708/62‑1 (MQ=255) accaccAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTc < 5:125992/149‑1 (MQ=255) ccaccaACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCg > 4:115972/1‑149 (MQ=255) cacgaACGTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGGGCTTGAAGCCGCGGCTGACGGTCACCAGCAATGTCGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGGTGTCGt < 3:203306/149‑1 (MQ=255) caccaACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCa > 6:415388/1‑89 (MQ=255) caccaACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCa < 5:415388/89‑1 (MQ=255) ccaACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTAc > 1:156465/1‑149 (MQ=255) cTGTCGCCGCGTGCGGGTTGGGGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGt < 4:328084/149‑1 (MQ=255) cTGTCGCCGCGTGCGGGTTGGGGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGt < 4:322480/149‑1 (MQ=255) cTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGt < 3:115972/149‑1 (MQ=255) tGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACgg < 6:121114/91‑1 (MQ=255) tGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACgg > 5:121114/1‑91 (MQ=255) tCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGTgg < 2:156465/148‑1 (MQ=255) gccgcGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGTGGCa < 8:368641/148‑1 (MQ=255) cgcgTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGTGGCAGAc < 5:270074/149‑1 (MQ=255) ctggTTGGCGCTTCGGAGTGACCGACGAGCCTACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGTGGCAGACGAACt < 3:262314/146‑1 (MQ=255) gggTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGTGGCAGACGAACTg > 6:298234/1‑148 (MQ=255) gggTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGTGGCAGACGAACTg < 5:298234/148‑1 (MQ=255) ttGGCGCTTCGGAGTGACCGACGAGCAGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGTGGCAGACGAACTGGc > 6:170594/1‑147 (MQ=255) | GTTGAAGGCGCTGCGGGTGGGCAGGGTGCGGCGCATGTTGTGTGCCTCGCCCGACTACCTGGCGCGCCATGGTGTGCCGAAGCACCCGTCGGACCTGGCCGGGCATGCGATAATCGGCACCACCAACCTGTCGCCGCGTGCGGGTTGGCGCTTCGGAGTGACCGACGAGCCGACCTTGGTGCGCATGAAGCCGCGGCTGACGGTCACCAGCAATGACGGGGCAATCGCAGCTGCCAGCGGCGGGCTGGGGATTGCCCGGCTGCTGTCGTACCAGGTGGCAGACGAACTGGC > NC_002947/1339885‑1340175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |