| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,598,497 | T→C | 5.7% | N89D (AAC→GAC) ‡ | dctB ← | C4‑dicarboxylate transport sensor protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,598,497 | 0 | T | C | 5.7% | 256.8 / 4.3 | 87 | N89D (AAC→GAC) ‡ | dctB | C4‑dicarboxylate transport sensor protein |
| Reads supporting (aligned to +/- strand): ref base T (39/43); new base C (3/2); total (42/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
TAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCACGCTTGGCGTC > NC_002947/1598349‑1598644 | tAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGtt > 4:316182/1‑149 (MQ=255) ggggCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTc < 1:68831/148‑1 (MQ=255) ggggCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTc < 7:351032/148‑1 (MQ=255) ggggCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCt < 4:381749/149‑1 (MQ=255) gggCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTg < 7:347221/149‑1 (MQ=255) ggCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGa < 1:51873/149‑1 (MQ=255) cGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAAc < 4:344306/149‑1 (MQ=255) ggAAACCGTAGTTGGCGCCGACGTAGCTGCTGCGCTGCAGCCAGTTGCTGTCGGCTATGGACAGCCCGGTGCGGTGGAGCAGCTCGAGGGTGGATGAATTGGCGTCGCCATTGATGCGTTCGAGCTTGAGGTTCAGAACGCCCTGAAcc < 5:404510/149‑1 (MQ=255) aaCCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGAACGCCCTGAACCtca < 4:196509/149‑3 (MQ=255) aCCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCtttt > 8:332687/1‑149 (MQ=255) cGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTtcg > 8:84940/1‑149 (MQ=255) ttGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGAc > 2:165693/1‑149 (MQ=255) ttGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGAc > 4:147618/1‑149 (MQ=255) ggAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCCTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCg > 7:71508/1‑149 (MQ=255) gACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCcgc < 1:200367/149‑1 (MQ=255) cGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCgcgc < 1:263882/149‑1 (MQ=255) aGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAg > 7:144377/1‑149 (MQ=255) ctgGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTg < 8:144377/148‑1 (MQ=255) ctgGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGc > 2:209578/1‑149 (MQ=255) gggCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGa > 2:264509/1‑149 (MQ=255) gggCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGAGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTtc > 4:333336/1‑123 (MQ=255) gggCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGAGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTtc < 3:333336/123‑1 (MQ=255) ggCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGTTGCGAt < 3:147618/149‑1 (MQ=255) gCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCTCAAGGCTGCGATc < 1:165693/149‑1 (MQ=255) gCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATc < 3:23106/149‑1 (MQ=255) gCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATc < 7:332687/149‑1 (MQ=255) gCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATc < 5:99180/149‑1 (MQ=255) aGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAg < 2:291347/149‑1 (MQ=255) ccgccAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCt > 1:64519/1‑149 (MQ=255) cgccAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTc > 2:2415/1‑149 (MQ=255) gccAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTcc > 6:212557/1‑149 (MQ=255) gccAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCCTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTcc < 8:71508/149‑1 (MQ=255) cAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCgg > 1:21472/1‑149 (MQ=255) gCTGGCGGCAATGGCCAGCCCGGTGTGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTc > 4:384209/1‑147 (MQ=255) tGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAgc > 1:264673/1‑149 (MQ=255) gcggcAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTg > 8:71925/1‑127 (MQ=255) gcggcAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTg < 7:71925/127‑1 (MQ=255) gcggcAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTc < 6:341937/143‑1 (MQ=255) gcggcAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTc > 5:341937/1‑143 (MQ=255) gcggcAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAgc < 8:17/147‑1 (MQ=255) gcggcAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAgc < 2:51719/147‑1 (MQ=255) aaTGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGtt > 3:67846/1‑87 (MQ=255) aaTGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGtt < 4:67846/87‑1 (MQ=255) aaTGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCggg < 8:146204/136‑1 (MQ=255) aaTGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCggg > 7:146204/1‑136 (MQ=255) aaTGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCAATGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCa > 1:111507/1‑149 (MQ=255) gCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCAcggc > 6:82655/1‑149 (MQ=255) cAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCAcggcgg < 5:212557/149‑1 (MQ=255) cAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCAcggcgg < 1:2415/149‑1 (MQ=255) cAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCAcggcgg > 1:287862/1‑149 (MQ=255) cAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCAcggcgg < 2:264673/149‑1 (MQ=255) cAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAACTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCAGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTc > 4:157546/1‑132 (MQ=255) cAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAACTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCAGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTc < 3:157546/132‑1 (MQ=255) ccGGTGGGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAg < 5:207259/149‑1 (MQ=255) cGGTGCGGTCGAGCAGCTCGGGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAgg < 1:17005/149‑1 (MQ=255) ggTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACgg < 2:64519/149‑1 (MQ=255) cGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAg < 3:316182/149‑1 (MQ=255) gAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGc > 8:83217/1‑149 (MQ=255) gAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGc > 4:344535/1‑149 (MQ=255) agcagcTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGa > 4:78053/1‑136 (MQ=255) agcagcTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGa < 3:78053/136‑1 (MQ=255) gcagcTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGcga < 8:53930/149‑1 (MQ=255) tCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGcgatcgat > 1:235060/1‑149 (MQ=255) ggaggaATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGgtgt > 8:178357/1‑149 (MQ=255) gaggaATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGtgtg < 3:384209/149‑1 (MQ=255) ggaATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGtgtg > 5:247165/1‑147 (MQ=255) gaATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACAGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAg > 5:221319/1‑149 (MQ=255) aTTGGCGGAGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCCCGGCGGGGAGGGCACGGTCGCGATCGATCAGTGTGTGCCGTg > 8:159721/1‑149 (MQ=255) gcggcgCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGtt > 8:190328/1‑149 (MQ=255) cgcCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCg > 6:421693/1‑149 (MQ=255) cgcCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCg < 7:190328/149‑1 (MQ=255) aTGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGTTCAGGGTGTGCAGTGCGTTGGCGTACAGGcc > 7:156554/1‑149 (MQ=255) tGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGcc < 6:118780/86‑1 (MQ=255) gTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGt > 5:387718/1‑149 (MQ=255) ttCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGcgatcgat < 2:38174/114‑1 (MQ=255) ttCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGtt < 5:82655/149‑1 (MQ=255) cGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTg < 2:21472/148‑1 (MQ=255) gAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgc < 7:83217/148‑1 (MQ=255) acgaaaaGGTTCAGAACGCCCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctg > 7:338285/7‑149 (MQ=255) cTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctggc < 8:156554/149‑1 (MQ=255) tGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctggctg > 5:155280/1‑149 (MQ=255) aaaGGTTCAGAACGCCCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctggctg > 6:31165/3‑149 (MQ=255) aaaGGTTCAGAACGCCCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctggctg > 5:390975/3‑149 (MQ=255) gAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctggct < 1:209578/147‑1 (MQ=255) gAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctggct < 1:264509/147‑1 (MQ=255) gAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGctggctgg > 4:339924/1‑149 (MQ=255) gTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCATTGGCGTACAGGCCCAGTTGCTGGCTGGCAc > 3:45801/1‑149 (MQ=255) tCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCACGc > 6:341655/1‑149 (MQ=255) aGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCACGCtt < 3:344535/149‑1 (MQ=255) gagTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCACGCTTGGc > 3:346707/3‑149 (MQ=255) ttCTGAACCTTTTAGTCGACAGGGCCGCGCAAGGCTGCGATCAGCGCCGGCACCAGCGCCAGCACGGCGGGGAGGGCACGGTGGCGCTCGAACAGGGTGTGGAGTGCGTTGCCGGACAGGCCGAGGTGCTGGCTGGCACGCTTGGcggc > 4:89240/1‑147 (MQ=255) | TAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCACGCTTGGCGTC > NC_002947/1598349‑1598644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |