| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 272,007 | A→T | 11.4% | intergenic (+12/+17) | PP_0218 → / ← metP | sensory box protein/L,D‑methionine D‑methionine ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 272,007 | 0 | A | T | 11.4% | 161.0 / 9.8 | 61 | intergenic (+12/+17) | PP_0218/metP | sensory box protein/L,D‑methionine D‑methionine ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (24/30); new base T (3/4); total (27/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
GGATGCAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCATACCGATAGGCGA > NC_002947/271865‑272154 | ggATGCAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAagcag < 1:51365/149‑1 (MQ=255) gATGCAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAagcagc > 1:160362/1‑149 (MQ=255) tGCAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGccc < 1:27832/149‑1 (MQ=255) cAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCt > 2:219289/1‑148 (MQ=255) aGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCTTTGCAGcccggt < 2:11782/149‑4 (MQ=255) ggTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCTTTGCAGcccggtc < 1:219124/149‑5 (MQ=255) tGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTc > 7:236067/1‑148 (MQ=255) tGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCa < 7:86777/149‑1 (MQ=255) gCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTc > 8:62494/1‑147 (MQ=255) gCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTc < 7:62494/147‑1 (MQ=255) ccGAGGGCATCGAGCGGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCaa < 8:294657/148‑1 (MQ=255) ccGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCaa < 7:251848/148‑1 (MQ=255) gggCATCGAGCAGGCGGAACAGGCCAGCATTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCt > 1:25217/1‑149 (MQ=255) cATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGt > 3:174110/1‑148 (MQ=255) aTCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCCGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTAAGATTTAAACGCTTGtt > 5:400427/1‑148 (MQ=255) gCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGGTGCAAAGCAGCCCTCa > 1:135663/1‑123 (MQ=255) gCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCa < 2:135663/123‑1 (MQ=255) cAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAgg < 5:331494/149‑1 (MQ=255) aGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGc < 4:169060/149‑1 (MQ=255) ggCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCATAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCg < 1:288331/149‑1 (MQ=255) ggCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCGGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGGTTGTTCAAACCCTTCGCCAGGCg > 3:305113/1‑149 (MQ=255) gCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCgg > 1:22380/1‑149 (MQ=255) gC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTccc < 6:83541/149‑1 (MQ=255) tCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGc > 8:147387/1‑149 (MQ=255) tgctgcAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCaaa > 2:384046/1‑94 (MQ=255) tgctgcAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCaaa < 1:384046/94‑1 (MQ=255) gcAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTg > 6:319892/1‑149 (MQ=255) cAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTgg < 2:22380/149‑1 (MQ=255) ggaggaGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGAt < 7:147387/149‑1 (MQ=255) gTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGc > 5:405055/1‑149 (MQ=255) tGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAAACCTTCGCCAGGCGGTCCCCGCCGAGc > 6:191597/1‑137 (MQ=255) ccAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCa < 5:319892/148‑1 (MQ=255) gggCAGTGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGc < 4:271916/148‑1 (MQ=255) gggCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCt < 4:174110/149‑1 (MQ=255) gggCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCCCCCAGCTGGATCAACGCCACTAACGc < 1:219289/148‑1 (MQ=255) ggTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCa > 6:397358/1‑149 (MQ=255) gTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCg > 1:285426/1‑100 (MQ=255) gTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCg < 2:285426/100‑1 (MQ=255) cTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATgg < 2:155948/148‑1 (MQ=255) tGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGAGGACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGc > 1:297195/1‑149 (MQ=255) tGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTa > 6:331451/1‑138 (MQ=255) tGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTa < 5:331451/138‑1 (MQ=255) tGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGc > 4:348637/1‑148 (MQ=255) gggCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACg > 1:347631/1‑149 (MQ=255) gcggcCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATgg < 1:258408/139‑1 (MQ=255) gcggcCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATgg > 2:258408/1‑139 (MQ=255) ccAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGc < 5:397358/149‑1 (MQ=255) gCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGa > 4:87788/1‑148 (MQ=255) gATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCGAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTc < 4:305113/148‑1 (MQ=255) cGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACg > 6:139572/1‑102 (MQ=255) cGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACg < 5:139572/102‑1 (MQ=255) cGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAAc < 2:347631/147‑1 (MQ=255) ggATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTa < 3:348637/149‑1 (MQ=255) aTTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTTGAAACGCTGGTAGc > 8:258433/1‑149 (MQ=255) aTTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGc < 3:87788/149‑1 (MQ=255) ga‑gaCCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCa < 2:25217/148‑1 (MQ=255) a‑gaCCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCAt < 6:405055/148‑1 (MQ=255) tgagggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCa < 3:25414/110‑1 (MQ=255) tgagggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCa > 4:25414/4‑113 (MQ=255) tgagggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCATAcc > 3:26389/4‑149 (MQ=255) agggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCg < 5:234245/127‑1 (MQ=255) agggCTGCTTTGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCg > 6:234245/2‑128 (MQ=255) cTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTTGAACCGCTGGTAGCCATACCGATAgg < 7:258433/149‑1 (MQ=255) aaaGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCATACCGATAGGCGa > 1:393827/1‑148 (MQ=255) | GGATGCAGGTGCATGCCGAGGGCATCGAGCAGGCGGAACAGGCCAGC‑TTCCTGCTGCAGGAGGAGTGCCAGTTGGGGCAGGGGTACTGGTTCGGGCGGCCAGTGCCGGCTGAGGATCTTCGCTGGGATTGA‑GACCGGGCTGCAAAGCAGCCCTCAGATTTCAACGCTTGTTCAAACCCTTCGCCAGGCGGTCCCCGCCCAGCTGGATCAACGCCACTAACGCTACCAGCATGGCGATCACGGTCAGCATGATCTGGCTGTCGAAACGCTGGTAGCCATACCGATAGGCGA > NC_002947/271865‑272154 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |