Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,638,987 A→G 6.3% Y142H (TAC→CAC)  czcR‑III ← response regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,638,9870AG 6.3% 186.2 / 2.5 63Y142H (TAC→CAC) czcR‑IIIresponse regulator
Reads supporting (aligned to +/- strand):  ref base A (27/32);  new base G (2/2);  total (29/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.56e-01

GTGTCGCAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCTTGAGCAGGTAG  >  NC_002947/1638851‑1639123
                                                                                                                                        |                                                                                                                                         
gtgtCGCAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTggcg                                                                                                                               >  6:177798/1‑149 (MQ=255)
gtgtCGCAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTggcg                                                                                                                               >  8:173357/1‑149 (MQ=255)
 tgtCGCAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTggcgg                                                                                                                              >  1:268274/1‑149 (MQ=255)
    cGCAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑g                                                                                                                          <  7:173357/149‑1 (MQ=255)
     gCAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑gg                                                                                                                         >  6:85872/1‑149 (MQ=255)
      cAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGgc                                                                                                                                        <  8:183571/134‑1 (MQ=255)
      cAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGgc                                                                                                                                        >  7:183571/1‑134 (MQ=255)
      cAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑ggg                                                                                                                        <  3:373625/149‑1 (MQ=255)
         tCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGTCGCGGTAGGCGCGGTGGCGGCC‑GGGGTc                                                                                                                     <  1:231430/149‑1 (MQ=255)
           gAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTc                                                                                                                     >  3:290480/1‑147 (MQ=255)
            aaGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAg                                                                                                                  <  5:85872/149‑1 (MQ=255)
              gTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGtt                                                                                                                >  5:51894/1‑149 (MQ=255)
                  aTGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAg                                                                                                            <  5:7129/149‑1 (MQ=255)
                   tGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAgg                                                                                                           <  2:268274/149‑1 (MQ=255)
                     tCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGt                                                                                                          >  5:265538/1‑148 (MQ=255)
                       ccACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCa                                                                                                        <  7:365904/148‑1 (MQ=255)
                           acCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGAc                                                                                                   <  4:290480/149‑1 (MQ=255)
                             cAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGAcgc                                                                                                 <  5:177798/149‑1 (MQ=255)
                             cAGCGAGAGGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGGCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGAcgc                                                                                                 <  4:184778/149‑1 (MQ=255)
                                cGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCa                                                                                              <  2:12115/149‑1 (MQ=255)
                                cGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCa                                                                                              <  2:5502/149‑1 (MQ=255)
                                      gatCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGc                                                                                        >  6:19791/1‑149 (MQ=255)
                                                   gACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTg                                                                           >  6:165763/1‑149 (MQ=255)
                                                   gACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTg                                                                           >  4:248438/1‑149 (MQ=255)
                                                   gACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTg                                                                           <  3:248438/149‑1 (MQ=255)
                                                    acaacaCTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGc                                                                          <  3:90935/149‑1 (MQ=255)
                                                    acaacaCTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGGCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGc                                                                          <  3:96411/149‑1 (MQ=255)
                                                       acacTTCGCCAGTCTGGCACATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTgg                                                                       <  4:116040/149‑1 (MQ=255)
                                                           ttCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAg                                                                                                            <  6:11969/108‑1 (MQ=255)
                                                           ttCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAg                                                                                                            >  5:11969/1‑108 (MQ=255)
                                                                     tGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTg                                                                                                                                  >  3:294490/1‑77 (MQ=255)
                                                                     tGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTg                                                                                                                                  <  4:294490/77‑1 (MQ=255)
                                                                       gcgcATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAg                                                         >  1:154685/1‑147 (MQ=255)
                                                                           aTTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCt                                                   >  3:400472/1‑149 (MQ=255)
                                                                            ttAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCt                                                                                  >  8:299028/1‑117 (MQ=255)
                                                                            ttAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCt                                                                                  <  7:299028/117‑1 (MQ=255)
                                                                               gCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCg                                                >  5:64421/1‑148 (MQ=255)
                                                                               gCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCg                                                >  6:143760/1‑148 (MQ=255)
                                                                                         cagGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCa                                     <  4:400472/149‑1 (MQ=255)
                                                                                                   tCCTTGGCGGTCTGGTCTATGCGCTGCCGGGCGGGGTAGGCGGGGGGGGGGCG‑GGGGTCCTGTTCCAGGGCAGCTCCGCGCTGGGTGCTGGGCTGCAGTTGCTGGTCGTTg                                                                 <  6:323800/111‑1 (MQ=255)
                                                                                                   tCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTGGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTg                                                                 <  4:190366/111‑1 (MQ=255)
                                                                                                   tCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTGGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTg                                                                 <  4:184127/111‑1 (MQ=255)
                                                                                                   tCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTGGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTg                                                                 >  3:190366/1‑111 (MQ=255)
                                                                                                   tCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTGGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTg                                                                 >  3:184127/1‑111 (MQ=255)
                                                                                                   tCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAgg                           >  6:354615/1‑149 (MQ=255)
                                                                                                      ttGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGaa                        >  8:230130/1‑149 (MQ=255)
                                                                                                           ggTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCa                    >  2:403478/1‑148 (MQ=255)
                                                                                                             tCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAg                 >  3:389616/1‑149 (MQ=255)
                                                                                                             tCAGGTCGAGTCGCTGCACGGCGCGGTAGGCGCTGTGGCGGCC‑GGGGTCCATTTCCAGGTAAGCGACTCTAAGGGTGCTGGGCTGCAGTTGCTGGTCGTTTCGGCGTAGCATGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAg                 <  4:12395/149‑1 (MQ=255)
                                                                                                               aGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGaa                        >  6:134879/1‑140 (MQ=255)
                                                                                                               aGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGaa                        <  5:134879/140‑1 (MQ=255)
                                                                                                                ggTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGc              <  6:64421/149‑1 (MQ=255)
                                                                                                                 gTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCt             >  6:367733/1‑149 (MQ=255)
                                                                                                                    gATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCTTGa          <  4:389616/149‑1 (MQ=255)
                                                                                                                      tGCGCTGCCCGGCGCGGTAGGCGGGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCTTGAGc        <  4:248096/149‑1 (MQ=255)
                                                                                                                      tGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAATGGGCTTGAGc        <  5:19791/149‑1 (MQ=255)
                                                                                                                      tGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCTTGAGc        <  5:367733/149‑1 (MQ=255)
                                                                                                                       gcgcTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCTTGAg         >  3:194241/1‑147 (MQ=255)
                                                                                                                         gcTGCCCGGCGCGGTAGGCGCGGTGGCGGCCGGGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTg                                                                                      >  1:257059/1‑69 (MQ=255)
                                                                                                                         gcTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTg                                                                                      <  2:257059/68‑1 (MQ=255)
                                                                                                                            gCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCTTGAGCAGGTAg  >  7:343238/1‑149 (MQ=255)
                                                                                                                            gCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCTTGAGCAGGTAg  <  6:51894/149‑1 (MQ=255)
                                                                                                                             cccGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCTTGAGCAGGTAg  <  6:265538/148‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                         
GTGTCGCAGTCGAAGTTCATGTCCCACACCAGCGAGATGATCTGCGTGCGCGACAACACTTCGCCAGTCTGGCGCATTAGCAGGTGCAGCAGGGCGAACTCCTTGGCGGTCAGGTCGATGCGCTGCCCGGCGCGGTAGGCGCGGTGGCGGCC‑GGGGTCCAGTTCCAGGTCAGCGACGCGCAGGGTGCTGGGCTGCAGTTGCTGGTCGTTGCGGCGTAGCAGGCTGCGGATGCGCGCCAGTAGCTCAGGGAACTCAAAGGGCTTGAGCAGGTAG  >  NC_002947/1638851‑1639123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑