| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,703,248 | A→G | 8.3% | intergenic (+97/‑70) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,703,248 | 0 | A | G | 8.3% | 158.9 / 5.5 | 63 | intergenic (+97/‑70) | lysS/PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (28/26); new base G (2/3); total (30/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.36e-01 | |||||||||||
GCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGC > NC_002947/1703100‑1703395 | gCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACaaa < 8:390280/149‑1 (MQ=255)gCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCACTCCTACaaa < 7:227888/149‑1 (MQ=255) ccGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAg < 7:119281/149‑1 (MQ=255) cGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAgg < 4:30336/149‑1 (MQ=255) gTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGc < 5:42173/149‑1 (MQ=255) gATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑tt < 5:317246/149‑1 (MQ=255) gATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑tt < 7:6842/149‑1 (MQ=255) aTCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTg < 5:90532/149‑1 (MQ=255) cgcgACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTa < 5:260245/148‑1 (MQ=255) cGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCATGTGCTGGCCCCTTCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGTAGGAGc < 1:102219/149‑1 (MQ=37) cGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCg < 8:51299/149‑1 (MQ=255) gTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCgg < 8:224860/149‑1 (MQ=255) gTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCgg < 1:163365/149‑1 (MQ=255) gTCATCCTGTCCCCGGACATGCGTGCGCAGGCCTGAGTGAGCTGATCGAGCCGCCTTTCGAGGCGGGTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGGCTCTTCGCGGGTAAACCCGCTGCTTCTAAGGCC‑TTGTAGGAGCgg < 6:344381/149‑1 (MQ=255) tCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCggg < 3:220015/149‑1 (MQ=255) aTCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGTAGGAGCGGGt < 1:275660/148‑1 (MQ=255) aTCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTACTACAAAGGCC‑TTGTAGGAGCGGGtt > 3:292815/1‑149 (MQ=255) cTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTAc < 5:89689/149‑1 (MQ=255) ttCCCGAACATGCGTCCTCATGCCTGAGTGATCATAACGTCCCGCCTTTCTCGGCGGCTTTTTCTTGCCTCAATGTTTATGTTGTAA‑TTACCGGCCTCTTCGGGGGTAAACCCGCTCCTACACATGCC‑TTGTAGGAGCGGGTTTAccc < 8:138183/148‑1 (MQ=21) ccGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTTAAACCCCTCCTAAAAAGGCC‑TTGTATGAGCGGGTTTTCCcgcg > 3:25452/1‑148 (MQ=255) ccGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACaaa < 1:128457/121‑1 (MQ=255) ccGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACaaa > 2:128457/1‑121 (MQ=255) gTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTACTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAg > 6:338810/1‑148 (MQ=255) gCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCgg < 8:171712/123‑1 (MQ=255) gCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCgg > 7:171712/1‑123 (MQ=255) aGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTACTACAAAAGGC‑GTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCAcatac > 2:348440/1‑145 (MQ=37) cTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTAc < 4:119771/123‑1 (MQ=255) cTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTAc > 3:119771/1‑123 (MQ=255) tgagtgagCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCAACAAATGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCATCACTGACGaaa > 6:338629/1‑148 (MQ=255) gagtgagCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAaca > 7:377145/1‑149 (MQ=255) gtgagCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAAACCGCTACGACAAAGGCC‑GTGTAGGAGCGGGGTTACCCGCGAAGGGGGCCGCACTGCCGAAACAcc > 6:379976/1‑149 (MQ=38) gAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTa > 5:87147/1‑149 (MQ=255) tCGTGGGGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCT‑TTACGGGACTTTTCGGGTTAAAACCGGCTCATAAAATGGCT‑TTGTTGTTGGGGTTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTg < 4:292815/148‑1 (MQ=255) gaaaGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGt < 1:246197/144‑1 (MQ=255) ccggcggcTTTTTCTTGCCTTAAGTTTTATGTTGTCA‑TTACCGGCCTCTTCGCGGTTAAACCCGCTCCTACAAAGGCT‑TTGTAGGTGGGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGac < 8:377145/146‑1 (MQ=255) tgggggttttttGTTGCCTCACGATTTATTTTTACA‑TAACCGCCCTCTCCCCGGTAAACCCCGCACAAAAAACGCCC‑TTGTAGCAGGGGGTTAACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGacac < 1:348440/142‑1 (MQ=255) tttttCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCcgc > 5:302169/1‑92 (MQ=255) tttttCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCcgc > 3:290195/1‑92 (MQ=255) tttttCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCcgc < 4:290195/92‑1 (MQ=255) tttttCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCcgc < 6:302169/92‑1 (MQ=255) tGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAAACCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGGAGGGGCCAGCACTGACGAAACCCCCCCATGAGGTATCCCCCGTGACACCCGCCCTGCCTGCCCAAg > 7:289861/1‑149 (MQ=38) atgttttATGTTGTCA‑TTCCGGGCCTCTTCGCGGGTAAACCGCCTCATAAAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAgg < 5:338810/144‑1 (MQ=37) aaGGTTTATGTTGTCT‑TTCCCGGGCTATTCGCGGTTAAACGCGCTCCTACAAAGGCC‑TTGTCGGAGGGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAg < 5:338629/147‑1 (MQ=255) gatttATGTTGGCA‑TTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTCGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGgcgc < 2:80373/147‑1 (MQ=255) cA‑GTACCGGCCTCTTCGCGGGTAAACCCCCTACTACAAAGGCC‑ATGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACAGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATTCCAGACCAAGGCGCCCCCCGCATCGc > 2:132065/1‑149 (MQ=37) a‑GTACCGGCCTCTTCGCGGGTAAAACCGCAACAAAAAAGCCC‑ATGTAAGAGACCGTTTACCCCCCAATTGGCCATCACTGACAAAACCACCCCAACACCAAAACCCCGGGACAACCGCCAAGCCATACCAAGGCCCCCCCGGCaaccc > 8:4867/1‑144 (MQ=255) cccGCCCTCTTCGCGGCTAACCCCGCTCCAAAATCGCCG‑TTTTTGGTGGGGTTTAACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCAcc < 6:27609/148‑1 (MQ=255) gCCTCTTCGCGGGTAAACCCGCTCCGACAAAGGCC‑GTGTTGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGGCGAAACCCCCCCATGAGGTATGCCCCGTGGCGCCCGCCCTGCCGGCCCACGGCGCCGCCGGCCTCGCCCccgccg > 2:283054/1‑149 (MQ=25) ttCGCGGGTAAACCCGCTCCTACAAGGCCT‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGcc > 6:215985/1‑149 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAAAGGCC‑GTGTAGGAGCGGGTTTCCCCGCGAAGGGGCCAGCACGGACGAAACCCCCCCATGCGGTGTCCCCCGGGACACCCGCCCTGCGGGCCCACGGCGCCGCCGGCATCGCCCCCGCCGTCGcc > 5:293701/1‑149 (MQ=25) ttCGCGGGTAAACCCGCTCCTACAAAGGCC‑GTGTAGGAGCGGGGTTACCCGCGAAGGGGCCAGCACGGACGAAACACCCCCATGCGGTATCCCCCGGGCCACCCGCCATGCCTGCCCCAGGCGCCGCCGGCATCGCCCCCGCCGTCGcc > 2:351859/1‑149 (MQ=37) cgcgGGTAAACCCGCTCCTACAAAGGCC‑TTGTATGAGCGGGTTTACCCGCGAAGGGGCCACCACTTACGAAACACCCCCATGAGGTATCCCCCGTTACAAACGCCATTCCTCACCAAGGCGCCACCCGCATACCCACCGCCGTCGCCg > 4:257467/1‑148 (MQ=37) gggTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATTGCCACCGCCGTCGCCGAAAg > 1:193787/1‑149 (MQ=255) ggTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGc > 2:347029/1‑149 (MQ=255) ggTAAACCCGCTCATACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGc < 1:347029/149‑1 (MQ=255) tAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGt > 6:213804/1‑149 (MQ=255) aaccccGCTCATAAAACGCCC‑TTGTAGTAGGGGTTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATTGCCACCGCCGTCGCCGAAAGCGTg < 2:193787/146‑1 (MQ=255) aaaCCCGCTCCTACAAAGGCC‑TTGTAGGTGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGt < 6:87147/148‑1 (MQ=255) cccGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCaa > 6:424539/1‑149 (MQ=255) ccGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGATGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGCAAGCGTGCaa > 4:314583/1‑148 (MQ=255) gCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATa > 1:330789/1‑148 (MQ=255) tCCTACAAGGCCT‑TTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATAcc > 6:222093/1‑148 (MQ=38) cTACAAGGCCT‑TTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAg < 5:316493/149‑1 (MQ=38) cTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGt > 7:350234/1‑138 (MQ=255) cTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGt < 8:350234/138‑1 (MQ=255) aCAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 4:237744/1‑149 (MQ=255) aCAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGc > 4:124592/1‑149 (MQ=255) caaGGCCTTTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGcc < 5:215985/148‑1 (MQ=255) aaaGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCACCGTGACAACCGCCATGACTGACCAAGGCGCCGCCGGCATCTCCCCCGCCGTCCCCGaaa > 6:30206/1‑130 (MQ=38) aaGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc < 3:237744/149‑1 (MQ=255) | GCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCA‑GTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCGCGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGC > NC_002947/1703100‑1703395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |