| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,741,935 | C→G | 5.8% | intergenic (‑23/+61) | PP_1538 ← / ← PP_1539 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,741,935 | 0 | C | G | 5.8% | 209.2 / 4.4 | 69 | intergenic (‑23/+61) | PP_1538/PP_1539 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (29/36); new base G (2/2); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.06e-01 | |||||||||||
CTCGGTGACTGAAGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTCCGTCGAACCTTCCG > NC_002947/1741790‑1742077 | cTCGGTGACTGAAGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATcgcg > 2:393301/1‑149 (MQ=255)cTCGGTGACTGAAGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATcgcg > 7:110774/1‑149 (MQ=255) ggTGACTGAAGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCgg < 5:168441/147‑1 (MQ=255) ggTGACTGAAGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCgg > 8:242288/1‑147 (MQ=255) gTGACTGAAGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCTCTTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCa < 1:286397/149‑1 (MQ=255) cTGAAGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGaa < 7:112679/149‑1 (MQ=255) gAAGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATa > 6:225671/1‑149 (MQ=255) aaGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGaa > 3:171276/1‑146 (MQ=255) agagGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATaga < 5:128945/149‑1 (MQ=255) ggAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGACCAGGAGCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTgg < 2:72520/149‑1 (MQ=255) ggAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCa > 5:321695/1‑136 (MQ=255) ggAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCa < 6:321695/136‑1 (MQ=255) ccTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTg < 8:227413/133‑1 (MQ=255) ccTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTg > 7:227413/1‑133 (MQ=255) ccTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAggg < 1:220745/149‑1 (MQ=255) ttAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTa > 3:148067/1‑147 (MQ=255) aaCCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGc > 8:306702/1‑149 (MQ=255) ccGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCgg < 2:235581/149‑1 (MQ=255) cGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCggg < 8:110774/149‑1 (MQ=255) cGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCggg < 8:128147/149‑1 (MQ=255) cGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCggg < 1:393301/149‑1 (MQ=255) gggCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCgggg > 8:35547/1‑149 (MQ=255) gCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCACTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCggggtg < 3:186786/149‑1 (MQ=255) cGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCggggtggggt < 3:263053/149‑1 (MQ=255) gACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTa > 1:262870/1‑145 (MQ=255) gACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTa > 1:76743/1‑145 (MQ=255) tGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGAtgt > 2:125222/1‑149 (MQ=255) ccGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGct < 2:262870/146‑1 (MQ=255) cGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGAt > 2:93723/1‑140 (MQ=255) cGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGAt < 1:93723/140‑1 (MQ=255) cGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTgg < 5:167358/149‑1 (MQ=255) gTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTggg > 6:92675/1‑149 (MQ=255) ttCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCGATATGGCGGCaaag < 3:370332/95‑4 (MQ=255) ttCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCGATATGGCGGCaaag > 4:370332/1‑92 (MQ=255) tCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACACGGGGGGGGGGTACTGATGTGATCTGGGGtt > 6:260333/1‑147 (MQ=39) aGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAagag > 2:131737/1‑149 (MQ=255) ggATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCggg > 2:261768/1‑117 (MQ=255) gCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTTAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCa < 7:242288/149‑1 (MQ=255) cTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCGATATGGCGGCaaa < 7:346900/83‑3 (MQ=255) cTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCGATATGGCGGCaaa > 8:346900/1‑81 (MQ=255) cATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCg > 1:168617/1‑149 (MQ=255) aTCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGt < 4:171276/149‑1 (MQ=255) ggCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTgc < 1:125222/148‑1 (MQ=255) gCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTgcg > 2:197498/1‑148 (MQ=255) gCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGc < 2:76743/149‑1 (MQ=255) cTGAACAGGATCGGGCGTTCCT‑TTGCGTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCg > 1:11731/1‑149 (MQ=255) aaCAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTCAATAGAGTGGAGCGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGt < 5:92675/147‑1 (MQ=255) aCAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGt < 4:148067/149‑1 (MQ=255) aCAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGt > 5:334285/1‑149 (MQ=255) gggCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATg < 6:334285/149‑1 (MQ=255) cT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCa > 3:344948/1‑149 (MQ=255) t‑ttGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGc > 1:371386/1‑127 (MQ=255) t‑ttGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGc < 2:371386/127‑1 (MQ=255) t‑ttGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCAc > 8:193161/1‑149 (MQ=255) gCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCa < 1:141407/40‑1 (MQ=255) gCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCa > 2:141407/1‑40 (MQ=255) ttGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTAc > 4:235359/1‑149 (MQ=255) gagaCATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTAcc < 7:306702/148‑1 (MQ=255) aCATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGCGGCGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCGCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGt < 5:225671/149‑1 (MQ=255) aCATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGt < 7:35547/149‑1 (MQ=255) gCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGt < 1:197498/149‑1 (MQ=255) cTTCGCCTTTGCCGCCATATCGGGGATTTTAATATTGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTc < 2:11731/149‑1 (MQ=255) cTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTc > 3:100698/1‑149 (MQ=255) ttCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATgg > 2:201415/1‑124 (MQ=255) ttCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTcc > 1:65176/1‑149 (MQ=255) ctCGCCTTTGCCGCCCATTCGGGGGATTGAATATGCTGGCGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTcc < 5:260333/148‑1 (MQ=255) cTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTCCGTCg > 1:369055/1‑148 (MQ=255) tGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTCCGTCGaa < 3:235359/147‑1 (MQ=255) tGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTCCGTCGAAc < 2:168617/148‑1 (MQ=255) gccATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTCCGTCGAACCTTcc < 4:100698/149‑1 (MQ=255) ccATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTCCGTCGAACCTTCCg < 4:344948/149‑1 (MQ=255) | CTCGGTGACTGAAGAGGGAAAGCCTGGCTTAACCGGGCGTCGGGTGACTGTCTTCCGTCCTTCCAGGATGGCTCGGACCATCGGCCCGCTGAACAGGATCGGGCGTTCCT‑TTGCTTGAGACATAGCTTCGCCTTTGCCGCCATATCGCGGCAGTGAATAGAGTGGAGAGGGGTTACAGCGGGGTGGGGTACAGATGTGCTCTGGGGTTAAGAGCTGGCACCGGGGCGTGCGCAAGCGTTGTCAGCCATGGCGCGGCACTCTACCTGGTGCGGTCCGTCGAACCTTCCG > NC_002947/1741790‑1742077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |