| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,806,104 | C→G | 7.1% | S3S (TCC→TCG) | PP_1609 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,806,104 | 0 | C | G | 7.1% | 256.5 / 7.6 | 82 | S3S (TCC→TCG) | PP_1609 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (37/39); new base G (2/4); total (39/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
AATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTGACGCAGGTGATCGGGG > NC_002947/1805956‑1806251 | aaTGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTcc < 5:98216/149‑1 (MQ=255) aTGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCcg < 3:58009/149‑1 (MQ=255) ctgctgGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGa > 6:175229/1‑148 (MQ=255) ggTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAg > 6:241279/1‑148 (MQ=255) ggTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGCAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAg > 2:236738/1‑148 (MQ=255) gTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACACCTTCTGTGGGTTCCGCGAAATCACAg > 6:270413/1‑147 (MQ=255) cAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑Gc < 3:404929/149‑1 (MQ=255) aCCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGTTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTCCTGTGTTTTCGCGGAACCCACAGAAGTT‑gtat < 5:180198/149‑4 (MQ=37) aCCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTCCTGTGTTTTCGCGGAACCCACAGAAGTT‑gtat < 8:68246/149‑4 (MQ=38) cTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTCCTGTGTTTTCGCGGAACCCACAGAAGTT‑gtatca < 1:110171/149‑6 (MQ=37) cTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTCCTGTGTTTTCGCGGAACCCACAGAAGTT‑gtatc > 2:110171/1‑144 (MQ=37) cTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGCAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGAt < 1:236738/149‑1 (MQ=255) cTGCCCGGGCTGGTGCAGGCGGATTACCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTCCTGTGTTTTCGCGGAACCCACAGAAGTT‑gtatca < 5:206314/149‑6 (MQ=37) cTGCCCGGGCTGGTGCAGGCGGATTACCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTCCTGTGTTTTCGCGGAACCCACAGAAGTT‑gtatc > 6:206314/1‑144 (MQ=37) cccGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTAc < 6:349699/149‑1 (MQ=255) ccGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTAcc < 1:215947/149‑1 (MQ=255) gggCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCaa < 2:226095/149‑1 (MQ=255) gCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAg > 2:4728/1‑148 (MQ=255) tGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGa < 4:53877/127‑1 (MQ=255) tGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGa > 3:53877/1‑127 (MQ=255) aGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGtttttt < 5:241279/149‑1 (MQ=255) aGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGtttttt < 3:152917/149‑1 (MQ=255) aGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGtttttt < 4:167257/149‑1 (MQ=255) aGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGtttttt > 7:331203/1‑149 (MQ=255) aGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGtttttt < 1:81083/149‑1 (MQ=255) ggATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGcc > 5:143020/1‑148 (MQ=255) ggATTGCCAACTGCACTGGCAGATACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGAATACCATCCATAATTGATACAAATTGTGAGGGTACCGAAAAAACACAAGAGTG‑GCCGATAACCAAGAAGttttttcac > 7:260821/1‑145 (MQ=255) gATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGcc > 2:131037/1‑147 (MQ=255) aaCTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAAcaca < 4:286782/109‑1 (MQ=255) aaCTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAAcaca > 3:286782/1‑109 (MQ=255) aCTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTc < 1:46801/149‑1 (MQ=255) aCTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTc < 2:354559/149‑1 (MQ=255) aCTGCACTGGCAGTTACCGACGAACGCGCAAGGTATGAGCTGAAGGGTACATTCCGGTAGACTCCCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTCCCAAGCAGCTTTTTGCCGAGCTGATTc < 2:280610/149‑1 (MQ=255) cTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGc < 3:319439/122‑1 (MQ=255) cTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGc > 4:319439/1‑122 (MQ=255) tGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAAt > 5:60607/1‑149 (MQ=255) gCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGa < 5:175229/149‑1 (MQ=255) cgacgaACGCGCAAGGTTTGAGCTCAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTACGCGAAAACACAGGAGTT‑GCCGATTAACAAGCAGTTTTTTGCCGAGATGATTCTGGAAATTACGatcta > 7:257863/1‑144 (MQ=255) gaACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGc > 7:202364/1‑148 (MQ=255) gcAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCg < 6:29251/149‑1 (MQ=255) cAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCgg > 3:317617/1‑149 (MQ=255) aaGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCggg < 8:260821/149‑1 (MQ=255) aGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGt < 5:346942/149‑1 (MQ=255) gTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGta > 6:265853/1‑148 (MQ=255) tGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATAc < 6:60607/148‑1 (MQ=255) tGAAGGGTACATTCCGGTAGACTACCGTGCCTTCGTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGc > 1:11936/1‑149 (MQ=255) tGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGAATACCCTGGc > 1:141457/1‑149 (MQ=255) gAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCt > 3:205451/1‑149 (MQ=255) aaGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑TCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCt < 6:143020/148‑1 (MQ=255) tACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATg > 2:44337/1‑110 (MQ=255) tACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATg < 1:44337/110‑1 (MQ=255) cATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGTTAACACAGGAGTT‑GCCGAATACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGa < 1:131037/148‑1 (MQ=255) aTTCCGGTAGACTACCCTCCCTTCTTGATACAACATCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGATTTATGCCCAGCTGATTCTGGAAATGACGAGCGAACGCCATTCCGGGTATACCCTGCCAGTACAGAcc > 5:146847/1‑148 (MQ=255) aCTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGGCGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGtttt > 6:351096/1‑149 (MQ=255) aCTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGttt < 8:331203/148‑1 (MQ=255) tACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATAccc < 5:307530/123‑1 (MQ=255) tACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATAccc > 6:307530/1‑123 (MQ=255) tACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTc > 6:58723/1‑149 (MQ=255) cctccctTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGCCGCGGCAGTTTTTc > 2:328322/1‑146 (MQ=255) cctccctTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTc > 8:232708/1‑146 (MQ=255) cctccctTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTc > 5:192848/1‑146 (MQ=255) cctccctTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTc < 6:192848/146‑1 (MQ=255) ctccctTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCgaga < 1:4728/149‑1 (MQ=255) cttcttGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTg > 5:124745/1‑81 (MQ=255) cttcttGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTg < 6:124745/81‑1 (MQ=255) gATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACtg < 5:58723/146‑1 (MQ=255) aTACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGAt > 1:277740/1‑149 (MQ=255) aTACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCAGGGTATACCATGGCTGTACAGACGAGGCAGTTTTTCGCTCTGCACTGTGAt > 4:297527/1‑149 (MQ=255) tACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGAtt > 4:47232/1‑149 (MQ=255) tACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGAt < 5:265853/148‑1 (MQ=255) aCAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAg < 1:18526/83‑1 (MQ=255) aCAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAg > 2:18526/1‑83 (MQ=255) aCAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGAc < 4:92868/119‑1 (MQ=255) aCAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGAc > 3:92868/1‑119 (MQ=255) cAACTTCTGTGGGTTCCGCGAAAACACAGGAGTTGGCCGATAACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGACCGAACCCCATCCCGGGTATACCATGGATTTACAGACCCGGCAGTTTTTCGAGATGCACTTTGAtt > 1:268217/1‑148 (MQ=255) cAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTg < 5:31872/148‑1 (MQ=255) cAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTGa > 1:6984/1‑149 (MQ=255) aCTTCTGTGGGTTCCGCGTAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTGACg < 2:268217/149‑1 (MQ=255) cTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTGACGc < 2:1639/149‑1 (MQ=255) ttCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTGACGCa < 2:11936/149‑1 (MQ=255) tgGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTGACGCAgg < 7:232708/146‑1 (MQ=255) tgGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTGACGCAgg < 8:202364/146‑1 (MQ=255) gggTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGa < 1:24164/71‑1 (MQ=255) gggTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGa > 2:24164/1‑71 (MQ=255) ccGCGAAAACACAGGAGTT‑GCCGATTACCAAGAAGTTTTTTGCCGAGCTGATTCTGGAAATGACTAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGTCGCGGCAGTTTTTCGAGATGCACTGTGATTGACGCAGGTGATCggg < 8:257863/148‑1 (MQ=255) cgcgAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGGCGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTGACGCAGGTGATCgggg < 5:351096/148‑1 (MQ=255) | AATGCCTGCTGGCGGTGGCCAACCTGCCCGGGCTGGTGCAGGCGGATTGCCAACTGCACTGGCAGTTACCGACGAACGCGCAAGGTTTGAGCTGAAGGGTACATTCCGGTAGACTACCCTCCCTTCTTGATACAACTTCTGTGGGTTCCGCGAAAACACAGGAGTT‑GCCGATTACCAAGCAGTTTTTTGCCGAGCTGATTCTGGAAATGACGAGCGAACGCCATGCCGGGTATACCCTGGCTGTACAGACGCGGCAGTTTTTCGAGATGCACTGTGATTGACGCAGGTGATCGGGG > NC_002947/1805956‑1806251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |