Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,808,841 | T→C | 6.9% | intergenic (+46/‑109) | kdsA‑I → / → eno | 2‑dehydro‑3‑deoxyphosphooctonate aldolase/enolase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,808,841 | 0 | T | C | 6.9% | 250.4 / 7.1 | 87 | intergenic (+46/‑109) | kdsA‑I/eno | 2‑dehydro‑3‑deoxyphosphooctonate aldolase/enolase |
Reads supporting (aligned to +/- strand): ref base T (41/40); new base C (2/4); total (43/44) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.82e-01 |
CCATGCGCCCTGCGCCTGGATAAACTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACATCAAAGGTCGTGAA > NC_002947/1808697‑1808982 | ccATGCGCCCTGCGCCTGGATAAACTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGt > 4:3114/1‑149 (MQ=255) gcCCTGCGCCTGGATAAACTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCGACTGGTCAgggg < 8:73940/149‑1 (MQ=255) gcCCTGCGCCTGGATAAACTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCGACTGGTCAgggg < 4:155699/149‑1 (MQ=255) cccTGCGCCTGGATAAACTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGc < 6:42523/149‑1 (MQ=255) ccTGGATAAACTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAgg > 6:275012/1‑139 (MQ=255) ccTGGATAAACTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAgg < 5:275012/139‑1 (MQ=255) cTGGATAAACTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTAGCTCAGCGGATCCCTtc > 8:223755/1‑148 (MQ=255) aaaCTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCG‑CCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAg < 6:64618/130‑1 (MQ=255) aaaCTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCG‑CCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAg > 5:64618/1‑130 (MQ=255) aaCTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGc < 2:407672/148‑1 (MQ=255) aCTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCt > 1:45948/1‑149 (MQ=255) cTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTg > 4:243863/1‑149 (MQ=255) tGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGc > 1:45825/1‑149 (MQ=255) gCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCa > 4:261261/1‑148 (MQ=255) ccGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCa > 2:72143/1‑147 (MQ=255) gTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCGACTGGTCAggggt < 4:11580/124‑2 (MQ=255) gTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCGACTGGTCAggggt > 3:11580/1‑123 (MQ=255) cTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGt < 6:302344/149‑1 (MQ=255) tCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGc > 7:144342/1‑149 (MQ=255) ccAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGcc > 2:372738/1‑149 (MQ=255) cAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGcc < 2:45825/148‑1 (MQ=255) tCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGt > 7:184632/1‑148 (MQ=255) cAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGt < 1:410820/147‑1 (MQ=255) cAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGt > 2:410820/1‑147 (MQ=255) aaGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGaa > 8:268657/1‑149 (MQ=255) aaTTTGACGACCTGTTGAAAAGTTTTCCGACGTTAGAAACCG‑CGTAAATCTCATTTCTCGGGTAAAGTACCGACAGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGc < 7:223755/149‑1 (MQ=255) aTTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGc > 4:123589/1‑148 (MQ=255) gacgacCTGGTGAAAAGTTTTCCGACGGTAGAAACCGCCGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAg > 1:72612/1‑148 (MQ=255) gacgacCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAAc > 4:129523/1‑141 (MQ=255) gacgacCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAAc < 3:129523/141‑1 (MQ=255) cTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCct < 8:136077/149‑1 (MQ=255) gTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCctaag > 4:372815/1‑149 (MQ=255) gTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCcta < 1:282337/147‑1 (MQ=255) gAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTc > 4:26736/1‑119 (MQ=255) gAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTc < 3:26736/119‑1 (MQ=255) aaaaGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCctaagct < 3:372815/148‑1 (MQ=255) aGTTTTCCGACGGTAGAAACCG‑CGTAACGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAgt < 3:123589/149‑1 (MQ=255) gTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAgtt > 2:377596/1‑149 (MQ=255) tCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGttt > 3:274753/1‑149 (MQ=255) gACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCg > 4:233384/1‑149 (MQ=255) aCGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGt < 8:243346/149‑1 (MQ=255) cGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTc < 8:160812/149‑1 (MQ=255) tAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCaaa > 6:113035/1‑149 (MQ=255) tAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCAACAGGCCTGCCCAAAGCAAGTTCGCCCgg > 2:231362/1‑108 (MQ=255) tAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCAACAGGCCTGCCCAAAGCAAGTTCGCCCgg < 1:231362/108‑1 (MQ=255) aaaCCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTc > 3:110490/1‑149 (MQ=255) aaCCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCCCTGCCCATCTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCaaa < 1:136455/149‑1 (MQ=255) aaCCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCt < 8:184632/149‑1 (MQ=255) cg‑cgTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGa < 5:76669/149‑1 (MQ=255) g‑cgTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCACGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAg < 3:3114/149‑1 (MQ=255) aaaGCTCATTTCTCGGGTAAAGTAAAGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCAACCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAAAGGCAAGAATTTACTAAGCTAATTTGTTTTCGTCAAATTCTGGAGTCCt > 4:354392/1‑149 (MQ=255) cTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTac > 1:33080/1‑148 (MQ=255) cTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTac > 6:357300/1‑148 (MQ=255) aTTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTacaac > 4:160047/1‑148 (MQ=255) aTTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTacaac > 6:27885/1‑148 (MQ=255) aTTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTacaac < 2:187109/148‑1 (MQ=255) ctcGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTACGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATg < 3:261261/148‑1 (MQ=255) tcGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACACCAATgg > 2:287570/1‑148 (MQ=255) tcGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATgg > 8:14468/1‑148 (MQ=255) gggTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGa < 1:61622/130‑1 (MQ=255) gggTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGa > 2:61622/1‑130 (MQ=255) gggTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGc < 2:45948/147‑1 (MQ=255) ggTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGCGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATTGCaaa < 5:357300/149‑1 (MQ=255) gTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCaaaa < 7:268657/149‑1 (MQ=255) tAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCaaaaa < 5:27885/149‑1 (MQ=255) aaGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAAtc < 5:113035/149‑1 (MQ=255) tACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAAtcgtc < 4:110490/149‑1 (MQ=255) ccGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAAtcgtcg < 4:274753/148‑1 (MQ=255) ccGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGa < 1:372738/149‑1 (MQ=255) cGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTc > 8:118786/1‑109 (MQ=255) cccGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAAtcgtc < 6:247125/144‑1 (MQ=255) cccGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAAtcgtc > 5:247125/1‑144 (MQ=255) cccGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACAt < 2:72612/149‑1 (MQ=255) cccGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACAt > 6:126852/1‑149 (MQ=255) cccGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAACTTCGCACGGTGAACGGCAAGAAATTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGAATACAACAATCGCAAAAATCGTCGACAt > 2:279311/1‑149 (MQ=255) tCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACATCAAAg < 7:14468/149‑1 (MQ=255) gggagccc‑‑cTGACCGACTGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAAtcgtc > 1:58138/6‑140 (MQ=255) gggagccc‑‑cTGACCGACTGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAAtcgtc < 2:58138/135‑1 (MQ=255) c‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACATCAAAGGt > 6:247755/1‑149 (MQ=255) cc‑‑cTGCCCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGa < 4:58351/107‑1 (MQ=255) cc‑‑cTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGa > 3:58351/1‑107 (MQ=255) cc‑‑cTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACATCAAAGGTCGt > 1:283287/1‑149 (MQ=255) cTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACATCAAAGGTCGTGa < 1:377596/149‑1 (MQ=255) cTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACATCAAAGGTCGTGa > 3:307195/1‑149 (MQ=255) aCCAGTCGGTCAGGGGCTCCCTTCCTCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACATCAAAGGTCGTGaa < 3:243863/147‑1 (MQ=255) aCCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACATCAAAGGTCGTGaa < 2:283287/147‑1 (MQ=255) tgTCGGTCTGGTGGTAGCTTCATCAGGACTGCCCAAAGCAAGTTAGCGCGGTGAACTGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCaaa < 3:8000/91‑1 (MQ=255) | CCATGCGCCCTGCGCCTGGATAAACTGGAGCCGTTCCTGGTCCAGCTCAAGCAATTGGACGACCTGGTGAAAAGTTTTCCGACGGTAGAAACCG‑CGTAAAGCTCATTTCTCGGGTAAAGTACCGCCCGATCC‑‑ACCC‑‑CTGACCAGTCGGTCAGGGGCTCCCTTCATCAGGCCTGCCCAAAGCAAGTTCGCCCGGTGAACGGCAAGAATTTCCTAAGCTAAGTTGTTTTCGTCAAATTCTGGAGTGCTTACAACAATGGCAAAAATCGTCGACATCAAAGGTCGTGAA > NC_002947/1808697‑1808982 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |