| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,909,125 | C→G | 6.3% | A42A (GCG→GCC) | PP_1709 ← | fumarylacetoacetate hydrolase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,909,125 | 0 | C | G | 6.3% | 260.2 / 5.9 | 79 | A42A (GCG→GCC) | PP_1709 | fumarylacetoacetate hydrolase family protein |
| Reads supporting (aligned to +/- strand): ref base C (37/37); new base G (3/2); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.13e-01 | |||||||||||
GGGCGATGTTGGCGCCGCCTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTGGATCCTCCTTACTG > NC_002947/1908977‑1909269 | gggCGATGTTGGCGCCGCCTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGgcgcc < 8:72289/149‑1 (MQ=255) gCGATGTTGGCGCCGCCTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGgcgccgc > 7:2340/1‑149 (MQ=255) gCGATGTTGGCGCCGCCTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGgcgccgc > 4:394301/1‑149 (MQ=255) tGTTGGCGCCGCCTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCCGCGGcgccgcgccg > 7:106293/1‑149 (MQ=255) ttGGCGCCGCCTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCTCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTa < 8:325331/149‑1 (MQ=255) ttGGCGCCGCCTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTa < 4:304236/149‑1 (MQ=255) ggCGCCGCCTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAg < 2:204082/148‑1 (MQ=255) cgccTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTcc < 3:395107/149‑1 (MQ=255) gccTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCg < 4:95289/149‑1 (MQ=255) gCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACgg > 6:95008/1‑149 (MQ=255) aTGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTa > 8:276779/1‑149 (MQ=255) cgcgACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGgcgccgc > 4:218825/1‑120 (MQ=255) cgcgACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGgcgccgc < 3:218825/120‑1 (MQ=255) cgACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCgg < 2:406537/149‑1 (MQ=255) cAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGa < 8:99915/149‑1 (MQ=255) aGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAGTGCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGa < 1:102422/149‑1 (MQ=255) gCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAgg > 6:69006/1‑149 (MQ=255) cTCGATTTCATGGCAGAACTCGTCGGTCTGCGGCGGGGAAGGGCAGTTCGCCAATTGCCACGACCACGTTGATTGCCGGTTTCATGAAAAACACAG‑GCACCTCCGGCGCCGCGCCGTAGGATACCGGCAACGGGTAGTTGCGGCCGAg > 1:74495/1‑148 (MQ=255) cTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGc < 3:394301/149‑1 (MQ=255) tCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTACGGCGCGGCGCCGCAGGa > 1:178869/1‑119 (MQ=255) tCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTACGGCGCGGCGCCGCAGGa < 2:178869/119‑1 (MQ=255) gATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAg < 5:95008/148‑1 (MQ=255) gATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAg > 8:202991/1‑148 (MQ=255) cATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACAcc > 7:278662/1‑149 (MQ=255) aTGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACgg > 3:391512/1‑123 (MQ=255) aTGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACgg < 4:391512/123‑1 (MQ=255) aTGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACAccc > 7:171599/1‑149 (MQ=255) aTGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTACGGCGCGGCGCCGCAGGagc > 3:286006/1‑111 (MQ=255) aTGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTACGGCGCGGCGCCGCAGGagc < 4:286006/113‑3 (MQ=255) gCATAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGTCCAGGTTGCTTGCCGGTTTCATGAAAAACACTG‑GCTCCTGAGTCGCCGCGCCGTAGGATTCCGGCCACggg < 3:79484/121‑1 (MQ=255) gCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGc > 8:237803/1‑149 (MQ=255) cAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGcc > 6:318049/1‑149 (MQ=255) gtcgGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCggg > 5:34992/1‑148 (MQ=255) ggTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAgc > 5:226757/1‑149 (MQ=255) tCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAgcgc > 1:284206/1‑149 (MQ=255) cggc‑ggGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCAt < 6:34992/149‑1 (MQ=255) gggAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCggt < 8:2340/149‑3 (MQ=255) gggAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCt < 7:202991/149‑1 (MQ=255) gggCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCcgc > 2:349551/1‑149 (MQ=255) gTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCg < 3:390232/123‑1 (MQ=255) gTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCg > 4:390232/1‑123 (MQ=255) gTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCCCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATc < 7:276779/149‑1 (MQ=255) ttCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCg > 7:26611/1‑149 (MQ=255) cGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCgg < 5:69006/148‑1 (MQ=255) cccAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAg < 6:48020/149‑1 (MQ=255) cccAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAg > 5:48020/1‑149 (MQ=255) cTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCTCGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGa < 5:324061/146‑1 (MQ=255) cTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGa > 6:324061/1‑146 (MQ=255) cTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGa > 1:51298/1‑149 (MQ=255) cTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGa > 4:34915/1‑149 (MQ=255) cTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGa > 7:121645/1‑149 (MQ=255) tCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGAt > 8:226202/1‑149 (MQ=255) cGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGAAGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGACGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATg > 3:234811/1‑149 (MQ=255) gACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGAt < 2:51298/147‑1 (MQ=255) aCCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGc < 5:318049/149‑1 (MQ=255) cACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCcg > 3:254986/1‑149 (MQ=255) cACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCcg > 4:266458/1‑149 (MQ=255) aCGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCcgg < 8:171599/149‑1 (MQ=255) cGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCcggc > 8:374253/1‑149 (MQ=255) gTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCcggcg > 8:345851/1‑149 (MQ=255) gTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCcggcg < 1:349551/149‑1 (MQ=255) gcttgcCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCggg < 2:284206/148‑1 (MQ=255) gcttgcCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCggg < 7:226202/148‑1 (MQ=255) cttgcCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGtt < 2:74495/149‑1 (MQ=255) cttgcCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGtt < 8:122521/149‑1 (MQ=255) cttgcCGGTTTCATGAAAAACACAG‑GCTCCCGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGt < 8:106293/148‑1 (MQ=255) ttgcCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGAt > 3:213341/1‑136 (MQ=255) ttgcCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGAt < 4:213341/136‑1 (MQ=255) tgcCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCCCGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTg > 2:107102/1‑148 (MQ=255) gcCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGAc < 7:229160/92‑1 (MQ=255) gcCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGAc > 8:229160/1‑92 (MQ=255) cATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTaa < 8:278662/148‑1 (MQ=255) aTGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAg > 3:238084/1‑148 (MQ=255) aaaaaCACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCa < 3:266458/148‑1 (MQ=255) aaaaaCACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCAt > 4:75149/1‑149 (MQ=255) aaaaCACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCAt < 4:238084/148‑1 (MQ=255) aaaaCACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATg < 3:75149/149‑1 (MQ=255) aaaCACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATgg > 3:305720/1‑149 (MQ=255) cacaG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTg < 3:271646/149‑1 (MQ=255) acaG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTg > 6:140372/1‑148 (MQ=255) caG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTGGa > 3:193964/1‑149 (MQ=255) cTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTGGAtcct > 7:197285/1‑149 (MQ=255) cTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTGGAtcct > 6:361153/1‑149 (MQ=255) ccTACGGCGCGGCGCCGCAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTGGAtcctcc > 8:255704/1‑149 (MQ=255) cTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTGGAtcctc < 8:121645/147‑1 (MQ=255) gcgccgcgccGTAGGATTCCGGCCACGGGTAGTCGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTGGATCCTCCTTACTg > 6:76511/1‑149 (MQ=255) | GGGCGATGTTGGCGCCGCCTTTGGCGATGGCCGCGACCAGCTCGATTTCATGGCAGAACTCGTCGGTCTGCGGC‑GGGAAGGGCAGTTCGCCCAGTGCCTCGACCACGTTGCTTGCCGGTTTCATGAAAAACACAG‑GCTCCTGCGGCGCCGCGCCGTAGGATTCCGGCCACGGGTAGTTGCGGCCGAGGCAGAACACCCGGCCGACCGGGAAGCGCGCATCGCTGCCGCGGATCGGCAGGCTGACGATGGCCGGCGGGTTGAACAGGTAAGTCATGGGTGGATCCTCCTTACTG > NC_002947/1908977‑1909269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |