| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 289,946 | T→G | 5.7% | intergenic (+30/‑136) | oprE → / → PP_0235 | outer‑membrane porin E/peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 289,946 | 0 | T | G | 5.7% | 256.1 / 5.0 | 83 | intergenic (+30/‑136) | oprE/PP_0235 | outer‑membrane porin E/peroxidase |
| Reads supporting (aligned to +/- strand): ref base T (42/35); new base G (2/3); total (45/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.13e-01 | |||||||||||
AAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCTC > NC_002947/289806‑290090 | aaaGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAgg < 5:368729/147‑1 (MQ=255)aaaGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑Ct > 5:136581/1‑149 (MQ=255)aaaGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCATCAGGCGAGG‑c < 6:424687/148‑1 (MQ=255) ggCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑Ctttt < 5:166371/149‑1 (MQ=255) cTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGTCCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTtg > 3:271027/1‑149 (MQ=255) cTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTtg > 8:365547/1‑149 (MQ=255) cTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTtg > 6:221416/1‑149 (MQ=255) ggCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCATCAGGCGAGG‑Cttctttttca < 1:266215/149‑5 (MQ=255) cGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTtat < 4:377650/149‑1 (MQ=255) gTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGc < 3:9586/136‑1 (MQ=255) gTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGc > 4:9586/1‑136 (MQ=255) tCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTAtttta > 3:71251/1‑148 (MQ=255) tCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTAttt < 4:71251/147‑1 (MQ=255) tCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTg > 1:335783/1‑149 (MQ=255) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGt < 4:217092/149‑1 (MQ=255) tACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGAGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGt > 2:362179/1‑149 (MQ=255) ccGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTta > 5:212283/1‑149 (MQ=255) aGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTACGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCGTGCAGATTTATATGTATTTTGGTTataaataa > 4:322668/1‑149 (MQ=255) aGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTataaata > 8:275555/1‑148 (MQ=255) gcggcgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTAtaaataaa < 7:365547/149‑1 (MQ=255) gcgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTtgt > 2:72088/1‑110 (MQ=255) gcgAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTtgt < 1:72088/110‑1 (MQ=255) gAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTg > 6:267361/1‑132 (MQ=255) aaaGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGtta < 4:271027/149‑1 (MQ=255) gcCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGttatttat > 3:343933/1‑149 (MQ=255) ccTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTc < 6:136581/149‑1 (MQ=255) ccTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTc > 2:217304/1‑149 (MQ=255) cTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCt > 8:65922/1‑149 (MQ=255) gACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGc > 2:69974/1‑98 (MQ=255) cAAAGACCAGACTAGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATAGTTATTTATTCTTTTTg > 3:28907/1‑149 (MQ=255) aaaGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGt > 7:166866/1‑149 (MQ=255) aGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGt > 4:139161/1‑109 (MQ=255) aGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGt < 3:139161/109‑1 (MQ=255) cAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTaa > 3:51733/1‑149 (MQ=255) gACTCGCTTCATATTGAAATACACTTACAACTTACTGTAAGTCTTATCTGAAAAAGAATCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCATATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATc < 4:28907/149‑1 (MQ=255) aCTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTtgt < 7:143533/84‑1 (MQ=255) aCTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTtgt > 8:143533/1‑84 (MQ=255) cTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGa < 7:65922/149‑1 (MQ=255) cTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGa < 1:217304/149‑1 (MQ=255) cTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTG‑TATTTATTCTTTTTGTTTTTAATCGa < 2:335783/148‑1 (MQ=255) cTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTg > 3:318090/1‑148 (MQ=255) tCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAg > 1:185408/1‑149 (MQ=255) cATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCa < 6:212283/147‑1 (MQ=255) aTCGTTAACAACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAACCCTCGCCTGAGGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTTGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAgg < 8:376698/148‑1 (MQ=255) aTCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAATAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATTAATAAATTGTTATTTATTCTTTTTGTTTTTAATAGATTGGAgg > 2:82599/1‑148 (MQ=255) aTCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAgg < 6:46192/148‑1 (MQ=255) aTCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGAAGCGAGG‑CTTTTTTGTGCATGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAgg > 2:88236/1‑148 (MQ=255) tCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGc > 3:370014/1‑148 (MQ=255) aaCTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACAtt < 7:275555/148‑1 (MQ=255) cTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGaa < 5:221416/149‑1 (MQ=255) tACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCtttt > 6:20440/1‑119 (MQ=255) tACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCtttt < 5:20440/119‑1 (MQ=255) tACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAAc < 4:343933/149‑1 (MQ=255) ttACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAATTTGTTATTTATTCTTTTTGTTTTTAATc < 1:22483/125‑1 (MQ=255) aaCTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGtttt > 5:344468/1‑116 (MQ=255) aaCTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGtttt < 6:344468/116‑1 (MQ=255) aaCTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACgg > 6:370819/1‑148 (MQ=255) cTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGaa > 4:215239/1‑149 (MQ=255) tGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAc > 5:70121/1‑149 (MQ=255) aGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAccca < 6:70121/148‑1 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGGTCTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCa > 1:24748/1‑109 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGtt < 7:111779/78‑1 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGtt > 8:111779/1‑78 (MQ=255) tGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCa < 2:24748/108‑1 (MQ=255) gcacaaaaaaGCCTCGCATCAGGCGAGG‑CTTCTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGc > 7:180789/5‑149 (MQ=39) gAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTg < 6:167510/75‑1 (MQ=255) gAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTg > 5:167510/1‑75 (MQ=255) gAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGcc > 6:36548/1‑149 (MQ=255) aaaaaGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGcc < 8:166866/148‑1 (MQ=255) aaaaGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAAcc > 7:261256/1‑118 (MQ=255) aaaaGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAAcc < 8:261256/118‑1 (MQ=255) aaaaaaGCCTCGCATCAGGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAAACCATACGGTACAGAACCCAGCCCAGGAGCCg > 4:262387/1‑147 (MQ=255) agaagCCTCTCCTGATGCGATG‑CTTTTTTGTGCCTGCAGATTTATATTTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGc < 4:370014/149‑1 (MQ=255) gaagCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGcc > 8:154741/1‑149 (MQ=255) gCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCTCATTGAACCCATACGGTACAGAGCCCAGCCCAGGAGCCGCTGCCCAt > 5:286229/1‑149 (MQ=255) gCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCAt < 3:322668/149‑1 (MQ=255) ccTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAAc > 2:242671/1‑109 (MQ=255) ccTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAAc < 1:242671/109‑1 (MQ=255) ccTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcccagcc > 1:329393/1‑131 (MQ=255) ccTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAAcccagcc < 2:329393/131‑1 (MQ=255) tCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAg > 2:141233/1‑149 (MQ=255) gCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGc < 4:51733/148‑1 (MQ=255) tGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCTc > 5:273530/1‑148 (MQ=255) | AAAGGCCTGGGCTTCAGCCTGCGTCAAGGTGTCTACCGTGGTAGCGGCGAAAGCGCCCTGGACAAAGACCAGACTCGCTTCATCGTGAACTACACTTACAACTTCCTGTAAGCCGTAGCTGAAAAAGAAGCCTCGCCTGATGCGAGG‑CTTTTTTGTGCCTGCAGATTTATATGTATTTTGGTTATAAATAAATTGTTATTTATTCTTTTTGTTTTTAATCGATTGCAGGCACATTGAACCCATACGGTACAGAACCCAGCCCAGGAGCCGCAGCCCATGAGCCTC > NC_002947/289806‑290090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |