Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,946,541 A→G 7.1% intergenic (‑70/+14) PP_1747 ← / ← PP_1748 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,946,5410AG 7.1% 199.9 / 3.8 70intergenic (‑70/+14)PP_1747/PP_1748hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (33/32);  new base G (3/2);  total (36/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGCCGTCGCGGGTGACGAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGGG  >  NC_002947/1946396‑1946689
                                                                                                                                                 |                                                                                                                                                    
tGCCGTCGCGGGTGACGAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGcc                                                                                                                                                   <  2:306937/149‑1 (MQ=255)
tGCCGTCGCGGGTGACGAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGcc                                                                                                                                                   >  7:370102/1‑149 (MQ=255)
    gTCGCGGGTGACGAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGcccc                                                                                                                                                 >  6:324813/1‑147 (MQ=255)
     tCGCGGGTGACGAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAg                                                                                                                                              <  8:370102/149‑1 (MQ=255)
       gcgGGTGACGAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAggg                                                                                                                                            >  8:17603/1‑149 (MQ=255)
           gTGACGAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGtt                                                                                                                                        <  1:371700/149‑1 (MQ=255)
              aCGAAGTCCTCAATCAGGCGTGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTa                                                                                                                                      <  1:371825/148‑1 (MQ=255)
                gAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGcc                                                                                                                                   >  4:300156/1‑149 (MQ=255)
                gAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGcc                                                                                                                                   >  8:47097/1‑149 (MQ=255)
                   gTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCttt                                                                                                                                >  1:212143/1‑149 (MQ=255)
                   gTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCttt                                                                                                                                <  7:47097/149‑1 (MQ=255)
                   gTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCttt                                                                                                                                <  6:129436/149‑1 (MQ=255)
                       tCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGttt                                                                                                                            >  3:141395/1‑149 (MQ=255)
                        cAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTc                                                                                                                           <  7:178692/149‑1 (MQ=255)
                         aaTCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTcc                                                                                                                          <  4:32850/149‑1 (MQ=255)
                         aaTCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTcc                                                                                                                          <  2:330160/149‑1 (MQ=255)
                         aaTCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTcc                                                                                                                          <  1:150254/149‑1 (MQ=255)
                         aaTCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTc                                                                                                                           <  2:212143/148‑1 (MQ=255)
                          aTCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCTGCAAAGCGGCCCCaaca                                                                                                                                             >  7:82906/1‑127 (MQ=255)
                          aTCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCTGCAAAGCGGCCCCaaca                                                                                                                                             <  8:82906/129‑3 (MQ=255)
                             aGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGAc                                                                                                                       <  7:17603/148‑1 (MQ=255)
                                cGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAgg                                                                                                                   >  6:228009/1‑149 (MQ=255)
                                   gTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTg                                                                                                                >  4:282938/1‑149 (MQ=255)
                                    tCAGGGTTTCGGCTTGCAATTGGTCGTAGCGGATCAGCAAGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAATCATTAGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTATCTTTCCGACCAGCCTGt                                                                                                               >  3:218987/1‑149 (MQ=255)
                                          tttCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCTAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGtt                                                                                                                             <  2:33325/129‑1 (MQ=255)
                                          tttCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGtt                                                                                                                             >  1:33325/1‑129 (MQ=255)
                                             cGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGcc                                                                                                       <  5:228009/148‑1 (MQ=255)
                                                 ttGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGc                                                                                                                                    <  1:142840/115‑1 (MQ=255)
                                                 ttGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGc                                                                                                                                    >  2:142840/1‑115 (MQ=255)
                                                   gCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTAccc                                                                                                >  3:43314/1‑149 (MQ=255)
                                                          gTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTc                                                                                         >  5:44848/1‑149 (MQ=255)
                                                                          aTGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATc                                                                               <  1:329129/143‑1 (MQ=255)
                                                                          aTGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATc                                                                               >  2:329129/1‑143 (MQ=255)
                                                                            ggTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATc                                                                       >  3:190524/1‑149 (MQ=255)
                                                                            ggTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATc                                                                       >  8:350469/1‑149 (MQ=255)
                                                                             gTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATc                                                                       <  1:386138/148‑1 (MQ=255)
                                                                                  gCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTc                                                                 <  4:141395/149‑1 (MQ=255)
                                                                                     gtgtCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAg                                                              >  2:354818/1‑149 (MQ=255)
                                                                                       gtCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCt                                                            <  3:282938/149‑1 (MQ=255)
                                                                                        tCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCt                                                            <  5:324813/148‑1 (MQ=255)
                                                                                          tGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGttt                                                                                                                                       <  1:243011/71‑1 (MQ=255)
                                                                                          tGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGttt                                                                                                                                       >  2:243011/1‑71 (MQ=255)
                                                                                            aaaTAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCtggtgg                                                       >  3:235933/1‑149 (MQ=255)
                                                                                            aaaTAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCtggtg                                                        <  7:350469/148‑1 (MQ=255)
                                                                                            aaaTAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCtggt                                                         <  6:44848/147‑1 (MQ=255)
                                                                                                    aTGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTcc                                                                                  >  5:71924/1‑114 (MQ=255)
                                                                                                    aTGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTcc                                                                                  <  6:71924/114‑1 (MQ=255)
                                                                                                         cATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCaa                                          <  4:43314/149‑1 (MQ=255)
                                                                                                            gCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGc                                                      <  5:213080/134‑1 (MQ=255)
                                                                                                            gCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGc                                                      >  6:213080/1‑134 (MQ=255)
                                                                                                              tACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGAc                                     >  1:218070/1‑149 (MQ=255)
                                                                                                                 gcgAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGaa                                                  >  8:340650/1‑133 (MQ=255)
                                                                                                                 gcgAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGaa                                                  <  7:340650/133‑1 (MQ=255)
                                                                                                                     aaCATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGAc                                     >  8:367063/1‑142 (MQ=255)
                                                                                                                     aaCATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGAc                                     <  7:367063/142‑1 (MQ=255)
                                                                                                                     aaCATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGATTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTgg                              >  1:198667/1‑149 (MQ=255)
                                                                                                                      aCATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCcgc                                                                                              >  6:372281/1‑84 (MQ=255)
                                                                                                                      aCATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCcgc                                                                                              <  5:372281/84‑1 (MQ=255)
                                                                                                                         ttCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTAGTTTCCGACCAGGCTGTCAACGGCCGGTACCCGCGTGTCGCTTTCCATCTGAGCATCGTGCTCCAGCAGGTGGCTGAAGCGCTCAAGTCACGTATTTGccag                          >  2:42998/1‑147 (MQ=255)
                                                                                                                            gAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTg                       <  4:190524/149‑1 (MQ=255)
                                                                                                                                ccttGGGGCTGCAAAGCGGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGc                      >  3:9620/3‑146 (MQ=255)
                                                                                                                                ccttGGGGCTGCAAAGCGGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGc                      <  4:9620/144‑1 (MQ=255)
                                                                                                                                 gtTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAAt                  >  3:317997/1‑149 (MQ=255)
                                                                                                                                  ttGGGGCTGCAAAGCGGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATc                 >  2:49489/1‑149 (MQ=255)
                                                                                                                                    ggggCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGc               >  6:423640/1‑149 (MQ=255)
                                                                                                                                      ggCCGCTTTGCAGCCCCAAGTGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTg             <  4:235933/149‑1 (MQ=255)
                                                                                                                                      ggCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTg             >  2:348746/1‑149 (MQ=255)
                                                                                                                                              tGCAGCCCGAAGGGCGTTTATGCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCTTCTGGGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGGGGGGTGCGAATCGCTGGCAAATa      <  4:218987/148‑1 (MQ=255)
                                                                                                                                               gCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATAcg    >  2:61401/1‑149 (MQ=255)
                                                                                                                                               gCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATAcg    >  7:387191/1‑149 (MQ=255)
                                                                                                                                                 aGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATAcggg  >  1:70267/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
TGCCGTCGCGGGTGACGAAGTCCTCAATCAGGCGGGTCAGGGTTTCGGCTTGCAATTGGTCGTAGGGGATCAGCATGGTCGGGCGGTGTCTGAAATAGGTATGGGCATGCTACGCGAAACATTCGAGGTGTTGGGGCCGCTTTGCAGCCCCAAGGGCGTTTAGCCTTTGTTTCCGACCAGGCTGTCCACGGCCGGTACCCGCGTGTCGCTTTCCATCTGCGCATCGTGCTCCAGCTGGTGGCTGAAGCGCTCAAGTGACGTATTGGCCGGCTGCGAATCGCTGGCAAATACGGG  >  NC_002947/1946396‑1946689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: