| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 58,626 | T→A | 5.5% | intergenic (‑537/+151) | PP_5424 ← / ← PP_0050 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 58,626 | 0 | T | A | 5.5% | 281.3 / 4.5 | 90 | intergenic (‑537/+151) | PP_5424/PP_0050 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (49/36); new base A (2/3); total (51/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01 | |||||||||||
TTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTG > NC_002947/58478‑58769 | ttCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCt > 7:122804/1‑149 (MQ=255) tCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCt < 4:275409/148‑1 (MQ=255) aaCCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCtgt < 5:19492/146‑1 (MQ=255) aaCCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGa > 2:133780/1‑148 (MQ=255) cccAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGaa > 8:87866/1‑147 (MQ=255) aGGTCGCCAGACTAGGAGCTAAAGGATCGCTGAGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCAc < 8:204667/149‑1 (MQ=255) ggTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccga < 6:199636/149‑4 (MQ=255) gTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCAccc > 5:232980/1‑149 (MQ=255) gCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCtt > 4:235807/1‑149 (MQ=255) ccAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTc < 1:133780/149‑1 (MQ=255) cAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCa > 7:146464/1‑149 (MQ=255) cAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCa > 2:126337/1‑149 (MQ=255) tAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTc > 8:118865/1‑148 (MQ=255) tAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACaaaaa > 2:338643/1‑148 (MQ=255) aaaGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACaaaaaa > 3:192740/1‑148 (MQ=255) aaGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACaaaaaaaa > 4:209906/1‑149 (MQ=255) aaGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACaaaaaaaa < 3:386803/149‑1 (MQ=255) aaGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACaaaaaaaa > 4:386803/1‑149 (MQ=255) aGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAAt < 7:108218/149‑1 (MQ=255) aGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAAt < 6:232980/149‑1 (MQ=255) gATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATgg > 2:363476/1‑149 (MQ=255) cTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACACCTTCATTTCACAAAAAAAATGGCg > 3:310334/1‑146 (MQ=255) cGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGa < 8:146464/147‑1 (MQ=255) gACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGAtt > 3:371672/1‑148 (MQ=255) gACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTc < 3:235807/149‑1 (MQ=255) actactCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTcc < 1:338643/149‑1 (MQ=255) ctcctcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCa < 1:13805/110‑1 (MQ=255) ctcctcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCa > 2:13805/1‑110 (MQ=255) cctcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAAttt > 3:141951/1‑148 (MQ=255) tcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACGCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCAc > 5:355973/1‑149 (MQ=255) tcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCAc > 4:140469/1‑149 (MQ=255) aTCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACg < 1:126337/148‑1 (MQ=255) tCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACggg < 8:178533/149‑1 (MQ=255) ccTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGt > 4:316881/1‑149 (MQ=255) cTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATTGCGAAGATTCCAATTTCACGGGGTc > 2:264148/1‑149 (MQ=255) ccGAAAAGTCACGCTTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGc > 2:189114/1‑149 (MQ=255) ccGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTTTGGc < 7:118865/149‑1 (MQ=255) cGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGcc > 2:206/1‑149 (MQ=255) cGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGcc > 7:28944/1‑149 (MQ=255) cGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGcc > 5:243286/1‑149 (MQ=255) gAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccga > 6:35747/1‑93 (MQ=255) gAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccga < 5:35747/96‑4 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTcac < 8:375449/107‑1 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTcac > 7:375449/1‑107 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCAc < 2:187260/136‑1 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCAc > 1:187260/1‑136 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTa > 8:37487/1‑149 (MQ=255) aaaaGTCAAGCGTCGGTCGTAAACGGCCCTTTCCACGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTCTGAAAAGCACCCCTTCATTTCACAAAAAAAAAGGCGAAGATTCCAATTTCAAGGGGTCTGGCCt > 4:32877/1‑148 (MQ=255) tCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCAc > 6:71450/1‑148 (MQ=255) gcgTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTAtt < 4:192740/149‑1 (MQ=255) gtcggtcgTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTACAATTTAACGGGGTATGGCCTATAACCTAtttt > 6:378705/1‑149 (MQ=255) cggtcgTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTtgt > 5:197056/1‑149 (MQ=255) ggtcgTAAACGGCCCTTTCCAGTCCAATCAACTTTTGTGATTGGTGAGTAGTGATTTCTCGGCTTTTCTTTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTtgtg < 5:378705/149‑1 (MQ=255) ggtcgTAAACGGCCCTTTCCAGTCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGGACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTtgtg < 4:160636/149‑1 (MQ=255) ggtcgTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTtgt < 6:355973/148‑1 (MQ=255) gTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAAc < 6:197056/148‑1 (MQ=255) tAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAAcc > 2:183018/1‑148 (MQ=255) tAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccg < 1:243380/75‑3 (MQ=255) tAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccg > 2:243380/1‑73 (MQ=255) cGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACaa < 7:37487/149‑1 (MQ=255) ggCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAg < 1:206/149‑1 (MQ=255) cccTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGgt > 8:382089/1‑149 (MQ=255) cccTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGgt > 3:157719/1‑149 (MQ=255) ccTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGgtg < 3:316881/149‑1 (MQ=255) cTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGgtgt < 1:363476/149‑1 (MQ=255) ggCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGc > 8:386008/1‑149 (MQ=255) ggCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGc < 4:371672/149‑1 (MQ=255) ggCCAATCAACTTTTGTGATTGGCGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAACGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGc < 7:87866/149‑1 (MQ=255) ccAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCa < 8:28944/149‑1 (MQ=255) aaTCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAg > 7:149008/1‑148 (MQ=255) aaTCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGa < 3:140469/149‑1 (MQ=255) tCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGac > 1:157955/1‑148 (MQ=255) tCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGacac > 1:108103/1‑149 (MQ=255) gtgATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGc > 7:336753/1‑149 (MQ=255) aGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCtgctgc > 3:295997/1‑149 (MQ=255) tAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCgg > 5:243860/1‑149 (MQ=255) gggATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGc > 6:369047/1‑149 (MQ=255) gggATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGc > 2:401025/1‑149 (MQ=255) ggATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCt > 5:247/1‑149 (MQ=255) gATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCtt < 8:149008/149‑1 (MQ=255) ttCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCttttt < 7:386008/149‑1 (MQ=255) tctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATTGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCttttt < 8:336753/148‑1 (MQ=255) tctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGACTATCACCTATTTTGTGAACGTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGTCttttt < 6:243286/148‑1 (MQ=255) ctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTa < 1:264148/148‑1 (MQ=255) ctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTa < 6:247/148‑1 (MQ=255) ctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTa < 1:189114/148‑1 (MQ=255) tcGGCTTTTCTGTGAAAAGCACGACTTAATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCGTATCACGTATTTTGTGAACCTACAAGGTGTAATTCGCCAGac > 7:260818/1‑117 (MQ=255) tcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGac < 8:260818/117‑1 (MQ=255) tcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGt > 8:176227/1‑149 (MQ=255) tcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGt > 2:112827/1‑149 (MQ=255) tcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGATGCGGGCTTTTTAGt > 3:111236/1‑149 (MQ=255) gCTTTTCTGTGCAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGcc < 7:92666/149‑1 (MQ=255) ttttCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTg > 1:404894/1‑149 (MQ=255) | TTCTGAACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCACAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTG > NC_002947/58478‑58769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |