| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,256,334 | C→T | 6.2% | intergenic (+394/‑310) | asd → / → PP_1990 | aspartate‑semialdehyde dehydrogenase/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,256,334 | 0 | C | T | 6.2% | 238.0 / 3.8 | 80 | intergenic (+394/‑310) | asd/PP_1990 | aspartate‑semialdehyde dehydrogenase/transposase |
| Reads supporting (aligned to +/- strand): ref base C (39/36); new base T (3/2); total (42/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.83e-01 | |||||||||||
GGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGA > NC_002947/2256186‑2256477 | ggTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGc > 5:347384/1‑149 (MQ=255) tGACGGGCATCCATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCa > 4:40248/1‑149 (MQ=255) gggCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGa > 2:94316/1‑148 (MQ=255) gggCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGa > 2:326099/1‑148 (MQ=255) tGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACaaaaa < 1:326099/149‑1 (MQ=255) gCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGa < 2:58803/148‑1 (MQ=255) gCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGa > 1:58803/1‑148 (MQ=255) gCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGAc > 8:267040/1‑149 (MQ=255) gCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGAc > 8:267039/1‑149 (MQ=255) ccGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGAccc > 3:134369/1‑149 (MQ=255) tCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCTCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACccgcc > 1:362770/1‑149 (MQ=255) aaGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCTCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGt < 7:267040/149‑1 (MQ=255) aaGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCACGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACccgccgg < 7:267039/149‑2 (MQ=255) aGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGAAGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGt > 3:81116/1‑148 (MQ=255) gcgcTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTaa < 3:40248/149‑1 (MQ=255) ggcccccCGGAGGGGGCCGGCAGCGCGGTCCGCCCGGCAGCAGGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCg < 1:47702/146‑1 (MQ=14) gCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGa > 5:377575/1‑132 (MQ=255) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGa > 1:301085/1‑147 (MQ=255) cccAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACACCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGa > 7:134848/1‑147 (MQ=255) aGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGt < 6:347384/149‑1 (MQ=255) gATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGa < 2:301085/149‑1 (MQ=255) ggggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGaaa > 7:2549/1‑141 (MQ=255) ggggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGaaa < 8:2549/141‑1 (MQ=255) gggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCg > 4:351231/1‑136 (MQ=255) gggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCg < 3:351231/136‑1 (MQ=255) ggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAg < 1:38874/117‑1 (MQ=255) ggCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAg > 2:38874/1‑117 (MQ=255) gCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATg < 5:402749/149‑1 (MQ=255) cTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATgcga > 8:226616/1‑148 (MQ=255) gCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCa > 5:201541/1‑149 (MQ=255) ctccCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGtgaat > 5:18814/1‑149 (MQ=255) ctccCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGtgaat > 8:116599/1‑149 (MQ=255) ctccCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGtgaat > 8:162199/1‑149 (MQ=255) ccGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGtgaatga > 4:217725/1‑148 (MQ=255) ccGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTCGTTCCTTTTTGCCACGACAAAAAGGGACCAGCCGTAAGGGCGGAAAGGTGACTATTCGCCACCTGCGtgaatgaa > 8:219164/1‑149 (MQ=255) cGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGTCACGACAAAAAGGGACCCGCCGTAAGGGCGGa < 6:181118/117‑1 (MQ=255) cGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGTCACGACAAAAAGGGACCCGCCGTAAGGGCGGa > 5:181118/1‑117 (MQ=255) cGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTgaatgaat < 4:134369/149‑1 (MQ=255) cGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTgaatgaat < 6:201541/149‑1 (MQ=255) gAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATAcc < 7:162199/149‑1 (MQ=255) aGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGt < 6:137455/104‑1 (MQ=40) aGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGt > 5:137455/1‑104 (MQ=40) cAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTa > 5:172871/1‑148 (MQ=255) cAAGCCCGGAGCGAGGGGACCCCGGAGCATAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTAc > 1:22675/1‑149 (MQ=255) aaGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGcc > 3:78015/1‑126 (MQ=255) aaGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGcc < 4:78015/126‑1 (MQ=255) aaGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACt > 3:217670/1‑149 (MQ=255) gCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCg > 5:156039/1‑149 (MQ=255) gCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCg < 6:162393/149‑1 (MQ=255) ccGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGgt < 8:212779/149‑1 (MQ=255) agggAGGTGACGCCGGATGTTAGCGCAGGGGGCGTATGATGGGTGCGGACGG‑TTTTTTGTTCCTTTTTGCCAAGACTAAAAGTGACCGGCCTTAAGTGCGGATAGGTGTGTTTGCGCCACCTGCGTGAATGAATACCTAGTCGgtgtta < 6:172871/146‑3 (MQ=16) cGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGaa < 3:217725/148‑1 (MQ=255) ccccGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCCGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACt > 4:321420/1‑131 (MQ=255) ccccGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCCGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACt < 3:321420/131‑1 (MQ=255) cccGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATc > 7:221764/1‑149 (MQ=255) cGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGc > 2:387426/1‑111 (MQ=255) cGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGc < 1:387426/111‑1 (MQ=255) cGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaa < 8:134848/148‑1 (MQ=255) gTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagc < 4:26522/149‑1 (MQ=255) aGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCcac > 5:383852/1‑136 (MQ=255) aGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCcac < 6:383852/136‑1 (MQ=255) aGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaa > 2:44478/1‑149 (MQ=255) gcgcAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaag < 7:116599/149‑1 (MQ=255) gcAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaa < 7:14694/149‑1 (MQ=255) gcAGGGGCCGGATGATGGGAGCCGAAGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaa < 4:81116/149‑1 (MQ=255) gtcctgatgatGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCTGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaagcaa < 7:219164/143‑1 (MQ=255) ggATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaagcaagaagc < 1:94316/149‑1 (MQ=255) atgatgGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaagcaagaagcaa > 2:224882/1‑149 (MQ=255) gatgGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaagcaagaagcaag < 6:156039/148‑1 (MQ=255) gatgGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaagcaagaagcaag < 4:217670/148‑1 (MQ=255) atgGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaagcaagaagcaag > 6:1587/1‑147 (MQ=255) g‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAAt > 4:228777/1‑149 (MQ=255) tttttGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAAt > 4:362982/1‑148 (MQ=255) gTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCt < 7:226616/148‑1 (MQ=255) ttCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAATGTGACTATGCGACAACTGCGTTAATGAATACCTACTAGGTGTGAATTAACACATCCAAGAAGAAAGAAGAAAGAAGAAAGAAGCAAGAAGCAAATTAGTCTGt > 6:411132/1‑149 (MQ=17) tcccTTTTTGTCGTGGCAAAAAGGAACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaagcaagaagcaagaagcaagaa < 6:264887/133‑1 (MQ=14) tcccTTTTTGTCGTGGCAAAAAGGAACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCcaagaagcaagaagcaagaagcaagaagcaagaa > 5:264887/3‑135 (MQ=14) ccTTTTTGTCGTGGCAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGttt > 8:99133/1‑149 (MQ=255) cTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGttt < 5:1587/148‑1 (MQ=255) tttttGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGtttt > 1:369898/1‑148 (MQ=255) tttGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGa < 3:228777/148‑1 (MQ=255) ccACTACAAAAAGGGACCCTCCGTAAGGTCGGAAAGTTGACTATGCGCCACCTGCGTGAATTAATACCTACTCGgtgtta < 2:5645/80‑3 (MQ=14) ccACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGa < 2:12276/80‑1 (MQ=255) ccACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGa > 1:5645/1‑80 (MQ=255) ccACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGa > 1:12276/1‑80 (MQ=255) | GGTGACGGGCATGGATGCCCGTCAAGCGCTGGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGG‑TTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGA > NC_002947/2256186‑2256477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |