| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,322,253 | C→A | 6.0% | L267I (CTC→ATC) | PP_2042 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,322,253 | 0 | C | A | 6.0% | 215.0 / 2.8 | 66 | L267I (CTC→ATC) | PP_2042 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (29/33); new base A (2/2); total (31/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
GACTGGGAACAGACCCAGCTCGACAACTGTGGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTACGCGGCGAACTACCACAGCCGCACGCCT > NC_002947/2322106‑2322399 | gACTGGGAACAGACCCAGCTCGACAACTGTGGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAAcc > 7:243891/1‑148 (MQ=255) cTGGGAACAGACCCAGCTCGACAACTGTGGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCa < 3:8416/149‑1 (MQ=255) aCCCAGCTCGACAACTGTGGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAgg > 2:208604/1‑149 (MQ=255) aCCCAGCTCGACAACTGTGGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACATCACCAGCGAAgg > 1:182482/1‑149 (MQ=255) aCCCAGCTCGACAACTGTGGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACATCACCAGCGAAgg > 1:188825/1‑149 (MQ=255) cTGTGGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCAATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGc < 6:192098/136‑1 (MQ=255) cTGTGGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCAATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGc > 5:192098/1‑136 (MQ=255) tgtgGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTcg > 5:163300/1‑149 (MQ=255) tgGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTcg < 6:126656/147‑1 (MQ=255) cACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCgg > 8:252107/1‑147 (MQ=255) cACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCa < 6:371211/149‑1 (MQ=255) cACGTGCTTTTCGTACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCa < 2:186806/149‑1 (MQ=255) aCGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAg > 8:325281/1‑149 (MQ=255) ttttCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGAc > 4:322831/1‑147 (MQ=255) ttttCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGAc > 3:378332/1‑147 (MQ=255) ttttCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGAc > 3:25419/1‑147 (MQ=255) ttCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCa < 4:25419/147‑1 (MQ=255) cGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCAc < 6:277650/109‑1 (MQ=255) cGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGa < 5:260798/148‑1 (MQ=255) gAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGCTGCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCa > 1:89989/1‑145 (MQ=255) gAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCa < 2:89989/144‑1 (MQ=255) gAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATg < 7:252107/149‑1 (MQ=255) caacGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGc‑cc > 2:187976/1‑149 (MQ=255) caacGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGc‑cc < 3:308638/149‑1 (MQ=255) aacGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACATCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCg < 2:182482/149‑1 (MQ=255) aacGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACATCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCg < 2:188825/149‑1 (MQ=255) cGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGc > 2:77689/1‑148 (MQ=255) gACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGc‑cc > 6:24967/1‑145 (MQ=255) gACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGc‑cc < 5:24967/145‑1 (MQ=255) gACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCaa > 4:57012/1‑149 (MQ=255) gACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCaa > 2:308040/1‑149 (MQ=255) tttGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGc < 7:325281/148‑1 (MQ=255) tGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCgg < 6:163300/148‑1 (MQ=255) gATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTg < 1:187976/149‑1 (MQ=255) aTGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTcg < 4:378332/149‑1 (MQ=255) tCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGt > 6:244482/1‑85 (MQ=255) tCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGt < 5:244482/85‑1 (MQ=255) gc‑gcCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTAc < 4:239095/146‑1 (MQ=255) gc‑gcCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTAc > 3:239095/1‑146 (MQ=255) c‑gcCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCggg > 8:230434/1‑118 (MQ=255) c‑gcCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCggg < 7:230434/118‑1 (MQ=255) gcCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTggc > 3:306770/1‑149 (MQ=255) aaTTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGgcggcg > 8:238459/1‑149 (MQ=255) aaTTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGgcggcg < 8:243891/149‑1 (MQ=255) ttGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCt < 3:57012/149‑1 (MQ=255) cTCGGCAACCCCACAGCCGGGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGCACCGCAACAGCGGGCAGTGGGGCGTTTcgctg < 1:249979/127‑1 (MQ=255) tCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGa > 7:207243/1‑148 (MQ=255) aaCCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACAcc > 4:22763/1‑147 (MQ=255) aaCCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGCGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACAcc > 4:402581/1‑147 (MQ=255) aCCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAg < 1:77689/149‑1 (MQ=255) cacaGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTg > 4:58335/1‑149 (MQ=255) acaGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGAGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTgg > 6:348017/1‑149 (MQ=255) aGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGgcg > 8:88992/1‑149 (MQ=255) gCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGgcgc < 3:58335/149‑1 (MQ=255) gcgcCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGGGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTACGCGGCGAAc < 5:348017/147‑1 (MQ=255) gcgcCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTACGCGGCGAAc < 7:238459/147‑1 (MQ=255) cgcCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTACGCGGCGAACTAc < 8:207243/149‑1 (MQ=255) gcCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCg < 1:108453/122‑1 (MQ=255) ccGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTACGCGGCGAACTACca < 5:173502/149‑1 (MQ=255) cGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTcgctgcgctg > 3:226162/1‑97 (MQ=255) cGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTcgctgcgctg < 4:226162/97‑1 (MQ=255) ttCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCACTGGTACGTGGCGGCGCTGGACACCGAg < 3:106458/120‑1 (MQ=255) ttCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCACTGGTACGTGGCGGCGCTGGACACCGAg > 4:106458/1‑120 (MQ=255) tCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTcgctgcgctg > 2:195648/1‑94 (MQ=255) tCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTcgctgcgctg < 1:195648/94‑1 (MQ=255) aaCCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTACGCGGCGAACTACCACAGCCGCACGc < 1:208604/148‑1 (MQ=255) aaCCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGCGGCGGCGCTGGACACCGAGTTTGGCGCTTACGCGGCGAACTACCACAGCCGCACGcc > 5:104848/1‑149 (MQ=255) ccTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTAc > 4:241716/1‑121 (MQ=255) ccTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTAc < 3:241716/121‑1 (MQ=255) ccTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTACGCGGCGAACTACCACAGCCGCACGCCt > 4:94406/1‑148 (MQ=255) cTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTgg > 2:65230/1‑84 (MQ=255) cTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTgg < 1:65230/84‑1 (MQ=255) | GACTGGGAACAGACCCAGCTCGACAACTGTGGCACGTTCTTTTCGAACAACGACTTTTTGCCCGATGGGTGCGATGGCCTCGACGTGGGC‑GCCAAATTGCTCGGCAACCCCACAGCCGTGGCGGGGCTTGCGCCGTTCGGTGTGAACCTCACCAGCGAAGGCGTGCGCATACCTCGCGGCAGCGACCAGGATGC‑CCGCAACAGCGGGCAGTGGGGCGTTTCGCTGCGCTGGTACGTGGCGGCGCTGGACACCGAGTTTGGCGCTTACGCGGCGAACTACCACAGCCGCACGCCT > NC_002947/2322106‑2322399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |