Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,377,012 G→T 5.4% G57C (GGC→TGC)  PP_2084 → ribonuclease activity regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,377,0120GT 5.4% 229.2 / 3.5 74G57C (GGC→TGC) PP_2084ribonuclease activity regulator
Reads supporting (aligned to +/- strand):  ref base G (35/35);  new base T (2/2);  total (37/37)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.24e-01

TGTGACGCCTACCCGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTCGACGTGCTGATC  >  NC_002947/2376871‑2377155
                                                                                                                                             |                                                                                                                                               
tgtgACGCCTACCCTGACCTTTTACAAGTGCTTGAGCCTATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAg                                                                                                                                            <  1:277989/147‑1 (MQ=255)
tgtgACGCCTACCCGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAggg                                                                                                                                          >  6:125238/1‑149 (MQ=255)
    aCGCCTACCCGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCaaa                                                                                                                                      <  4:323547/149‑1 (MQ=255)
        cTACCCGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGc                                                                                                                                  >  6:99174/1‑149 (MQ=255)
        cTACCCGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGc                                                                                                                                  >  6:167731/1‑149 (MQ=255)
          aCCCGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTAGACGGCAAGGGCAAAGTGCtg                                                                                                                                >  7:146762/1‑149 (MQ=255)
           cccGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCtgg                                                                                                                               <  3:278754/149‑1 (MQ=255)
           cccGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCtgg                                                                                                                               <  3:119413/149‑1 (MQ=255)
           cccGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCtg                                                                                                                                <  5:125238/148‑1 (MQ=255)
               gACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACTGCAAGGGCAAAGTGCTggtggt                                                                                                                           >  2:11126/1‑149 (MQ=255)
               gACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACTGCAAGGGCAAAGTGCTggtggt                                                                                                                           >  2:17655/1‑149 (MQ=255)
                aCCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTc                                                                                                                          <  5:167731/149‑1 (MQ=255)
                 ccTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGTGCGAACTCGACGGCAAGGGCAAAGTGCtggtgggc                                                                                                                          >  6:404655/1‑146 (MQ=255)
                  cTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTggtggt                                                                                                                           >  5:229660/1‑146 (MQ=255)
                  cTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTggtggt                                                                                                                           <  6:229660/146‑1 (MQ=255)
                     gTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGAt                                                                                                                       <  5:99174/147‑1 (MQ=255)
                     gTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGAt                                                                                                                       <  1:40785/147‑1 (MQ=255)
                     gTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATgg                                                                                                                     >  8:74996/1‑149 (MQ=255)
                        cAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCgg                                                                                                                  >  8:71647/1‑149 (MQ=255)
                                 gAGCCGATGTTCAGCAATTTTGGTGGCCGCGAGTCGTTCGGTGGCCAGAGCGTTAGCCTCAAGTGGTTCGAGGACAATTCGGTGGTGAAGGAGCAGGTCGACCTGGACGGGCAGGTGAATGGGGTGGTGGTCGATGGGGGTGGGTCGCt                                                                                                         >  4:262060/1‑149 (MQ=255)
                                    ccGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTgcg                                                                                                      >  1:378786/1‑149 (MQ=255)
                                    ccGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGAGGTGGGTCGCTgcg                                                                                                      >  4:401558/1‑149 (MQ=255)
                                          ttCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTAGCTGGTCAAGGAGCAGTTCGAACTCGACGGCACGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGACGCTGCGCCGTgc                                                                                                >  2:373281/1‑149 (MQ=255)
                                             aGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTgcgc                                                                                              <  6:83760/148‑1 (MQ=255)
                                             aGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCgct                                                                                             >  3:315850/1‑149 (MQ=255)
                                               cAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGt                                                                                                  >  3:157523/1‑142 (MQ=255)
                                               cAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGt                                                                                                  <  4:157523/142‑1 (MQ=255)
                                                     tggtggCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGc                                                                                      <  4:315850/148‑1 (MQ=255)
                                                       gtggACGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTTGTCAAGGAGCAGGTCTAACTCGACGGCAAGGTCAAAGTGCTGGTGGTCGATGGCTGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGAc                                                                                   <  2:86391/149‑1 (MQ=255)
                                                             gcgATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGGAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTc                                                                             >  3:350930/1‑149 (MQ=255)
                                                             gcgATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGCTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTc                                                                             >  6:241058/1‑149 (MQ=255)
                                                                         gTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGcc                                                                 >  4:212019/1‑149 (MQ=255)
                                                                         gTGGCCAGATCGTTACAATCAAGTGTTTCGAGGCCAATTCGCTGGTCAAGGCGCAGGTCGAACGCGACGGCAAGGGCAAAGTGCTCGGGGTCCATGGCGGTGGGTCGCTGCGGCGTGCGCTGCTCGGCCCCATGCTCGCCGAAAACGcc                                                                 >  2:254834/1‑149 (MQ=255)
                                                                              cAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCgctgc                                                                                           <  1:59392/118‑1 (MQ=255)
                                                                              cAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCgctgc                                                                                           >  2:59392/1‑118 (MQ=255)
                                                                              cAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCTCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCaa                                                             >  5:165007/1‑148 (MQ=255)
                                                                                  tCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAAc                                                        >  6:234744/1‑149 (MQ=255)
                                                                                    gTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGTCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACg                                                       <  1:373281/148‑1 (MQ=255)
                                                                                    gTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACg                                                       <  2:378786/148‑1 (MQ=255)
                                                                                     ttACCATCATCTGTTTCGAGTACAATTCGCTGGTCAAGGTGCAGGTCGTACTCGACGGCAAGGTCTAATTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGTCGACATGCTCGCCGAAAAAGCCGCAAAAAACgtt                                                     <  8:255962/149‑3 (MQ=255)
                                                                                     ttACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGt                                                     <  7:71647/149‑1 (MQ=255)
                                                                                       aCCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGtt                                                    <  3:237957/148‑1 (MQ=255)
                                                                                        ccATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACTGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCCCGCCGAAAAAGCCGCAAAAAACGGTTg                                                   <  1:11126/148‑1 (MQ=255)
                                                                                        ccATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACTGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCCCGCCGAAAAAGCCGCAAAAAACGGTTg                                                   <  1:17655/148‑1 (MQ=255)
                                                                                           tCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTggg                                                 >  6:88093/1‑147 (MQ=255)
                                                                                           tCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGaa                                               <  3:401558/149‑1 (MQ=255)
                                                                                             aaGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGtt                                                    >  4:251796/1‑142 (MQ=255)
                                                                                             aaGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGtt                                                    <  3:251796/142‑1 (MQ=255)
                                                                                               gtgtTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGACGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGATGGGAAGGCt                                           >  4:35095/1‑149 (MQ=255)
                                                                                                     cGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTg                                      <  7:74996/148‑1 (MQ=255)
                                                                                                      gAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGa                                     >  2:281039/1‑148 (MQ=255)
                                                                                                      gAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGAt                                    <  8:146762/149‑1 (MQ=255)
                                                                                                       aGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATc                                   >  2:108968/1‑149 (MQ=255)
                                                                                                        ggACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTg                                         >  1:251173/1‑142 (MQ=255)
                                                                                                        ggACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTg                                         <  2:251173/142‑1 (MQ=255)
                                                                                                        ggACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCt                                  <  3:212019/149‑1 (MQ=255)
                                                                                                           cAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACg                               <  5:241058/149‑1 (MQ=255)
                                                                                                            aaTTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGa                                                >  4:107754/1‑131 (MQ=255)
                                                                                                            aaTTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGa                                                <  3:107754/131‑1 (MQ=255)
                                                                                                            aaTTCCCTGGTCAAGGAGCAGGGCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGGCGATGGCGGTGGGTCGATGCGACGTGCGCTGCTCGGCGACATGCTCGCCGAAAGAGCCGGAAAACACGGTTGGGAAGTCTTGGTGATCTACgg                              >  4:235806/1‑149 (MQ=255)
                                                                                                              ttCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCt                            >  6:257935/1‑149 (MQ=255)
                                                                                                                          ggAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACgg                                                      <  3:10388/111‑1 (MQ=255)
                                                                                                                          ggAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACgg                                                      >  4:10388/1‑111 (MQ=255)
                                                                                                                             gCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTc              >  7:147244/1‑148 (MQ=255)
                                                                                                                               aGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTCGAc           <  4:350930/149‑1 (MQ=255)
                                                                                                                                 gTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTCGACGt         <  5:234744/149‑1 (MQ=255)
                                                                                                                                  tCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTCGAc           >  7:51779/1‑146 (MQ=255)
                                                                                                                                  tCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTCGAc           <  8:51779/146‑1 (MQ=255)
                                                                                                                                    gAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCg                                                                            <  8:101819/79‑1 (MQ=255)
                                                                                                                                    gAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCg                                                                            >  7:101819/1‑79 (MQ=255)
                                                                                                                                    gAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGGTTGGTGATCTACGGCTGCGTGCGTGATGTCGACGTGc       <  1:281039/148‑1 (MQ=255)
                                                                                                                                      aCTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTCGACGTGc       <  5:257935/146‑1 (MQ=255)
                                                                                                                                      aCTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTCGACGTGCTGa    <  8:147244/149‑1 (MQ=255)
                                                                                                                                         cGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTCGACGTGCTGATc  >  1:124541/1‑148 (MQ=255)
                                                                                                                                             ggCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTa                                 >  7:273883/1‑113 (MQ=255)
                                                                                                                                             ggCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTa                                 <  8:273883/113‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                               
TGTGACGCCTACCCGGACCTGGTACAAGTGCTGGAGCCGATGTTCAGCAATTTTGGTGGCCGCGATTCGTTCGGTGGCCAGATCGTTACCATCAAGTGTTTCGAGGACAATTCGCTGGTCAAGGAGCAGGTCGAACTCGACGGCAAGGGCAAAGTGCTGGTGGTCGATGGCGGTGGGTCGCTGCGCCGTGCGCTGCTCGGCGACATGCTCGCCGAAAAAGCCGCAAAAAACGGTTGGGAAGGCTTGGTGATCTACGGCTGCGTGCGTGATGTCGACGTGCTGATC  >  NC_002947/2376871‑2377155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: