| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,482,504 | T→A | 5.4% | intergenic (‑129/‑49) | PP_2176 ← / → PP_2177 | transcriptional regulator, LysR family/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,482,504 | 0 | T | A | 5.4% | 231.2 / 2.5 | 74 | intergenic (‑129/‑49) | PP_2176/PP_2177 | transcriptional regulator, LysR family/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (34/36); new base A (2/2); total (36/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.74e-01 | |||||||||||
GGGCTGGAGGATTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATC > NC_002947/2482356‑2482648 | gggCTGGAGGATTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGt < 6:132447/149‑1 (MQ=255) ggCTGGAGGATTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGt > 6:107862/1‑148 (MQ=255) gaggaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAAttt > 2:222304/1‑149 (MQ=255) ggaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTc < 7:149061/149‑1 (MQ=255) gaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCa > 5:161074/1‑149 (MQ=255) gaTTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCa < 5:107862/149‑1 (MQ=255) aGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGaa < 7:145634/148‑1 (MQ=255) gCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGaaa > 5:10293/1‑148 (MQ=255) cACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAAt < 6:51508/149‑1 (MQ=255) aCGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCAt < 4:135774/141‑1 (MQ=255) aCGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCAt > 3:135774/1‑141 (MQ=255) ggCTACTCGCCGAGCGACTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTc > 8:301342/1‑149 (MQ=255) aCTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTaa > 3:179726/1‑148 (MQ=255) cTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTaaa < 1:222304/148‑1 (MQ=255) cGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAAt > 5:142979/1‑149 (MQ=255) gCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTCAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAAtt > 8:181769/1‑149 (MQ=255) aGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCAc < 7:112442/149‑1 (MQ=255) cgcCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACgg < 6:161074/149‑1 (MQ=255) aaGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACgg > 4:279805/1‑141 (MQ=255) aaGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACgg < 3:279805/141‑1 (MQ=255) aaGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCg > 8:279110/1‑148 (MQ=255) aaGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGa < 6:10293/149‑1 (MQ=255) gAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttcac < 5:134567/125‑6 (MQ=255) gAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttcac > 6:134567/1‑120 (MQ=255) gAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTCCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGaaa > 8:321137/1‑149 (MQ=255) aaaCCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttcac < 1:49048/124‑6 (MQ=255) aaaCCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGAAAATTTACATGAAAAAtttcac > 2:49048/1‑119 (MQ=255) cccGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGAt > 3:3445/1‑149 (MQ=255) gcgcCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGaa < 7:279110/149‑1 (MQ=255) aCCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCACAATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATg > 1:101486/1‑149 (MQ=255) cGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCAc < 2:144768/149‑1 (MQ=255) cAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGaaa < 6:88705/133‑1 (MQ=255) cAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACg > 3:135328/1‑148 (MQ=255) aGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGaa < 7:93706/149‑1 (MQ=255) gCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCCTGAAAATTTACATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTAACGGCAGTCCGAAACCATGACGAAGCACg > 8:199395/1‑146 (MQ=255) ccAATCCGCCACGTTGCGCAGCAAGCCCTCTGTCGGCCGCAGCAC‑ATTTCCATCGTTCGGCTTGACGCCTGAAATTTATCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGAAGTCAGAAACGATGAAGATGCAct > 4:190428/1‑144 (MQ=255) cAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAagag > 5:57937/1‑149 (MQ=255) aaTCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAgg < 7:301342/149‑1 (MQ=255) cGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGTTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTg > 8:86709/1‑148 (MQ=255) cGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTg < 5:273376/148‑1 (MQ=255) cGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTg > 7:207183/1‑148 (MQ=255) gCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAgg > 2:248/1‑144 (MQ=255) gCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAgg < 1:248/144‑1 (MQ=255) gCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTg > 6:114714/1‑147 (MQ=255) gCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGaa < 3:226980/149‑1 (MQ=255) cccACGTTGCGCAGCAAGCCATCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGATAAATAAGTCTAAAAATATCACGGCAGACAGAAACGATGAAGATGCACGAAGAGTTTGac > 2:288423/2‑148 (MQ=255) cGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGaa > 6:134726/1‑145 (MQ=255) cGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGaa < 5:134726/145‑1 (MQ=255) cGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGccc > 4:366987/1‑149 (MQ=255) gTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCt < 4:179726/149‑1 (MQ=255) caAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCt > 3:48232/1‑149 (MQ=255) caAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCt < 2:101486/149‑1 (MQ=255) caAGCCCTCTGTGGGCGGCTGAAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCAGGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCt > 8:37745/1‑149 (MQ=255) aGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTa < 1:8099/149‑1 (MQ=255) aGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTa < 6:142979/149‑1 (MQ=255) cccTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTAtt < 6:57937/149‑1 (MQ=255) ccTCTGTGGGCGGCTTCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTc < 5:114714/149‑1 (MQ=255) ccTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGTTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTAtt < 7:86709/148‑1 (MQ=255) gcggcTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTgc < 3:366987/149‑1 (MQ=255) gcTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATcc < 1:119312/131‑1 (MQ=255) gcTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTAGCGATcc > 2:119312/1‑131 (MQ=255) cac‑aTTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAAtt > 7:265002/1‑149 (MQ=255) ttCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAg > 3:110869/1‑148 (MQ=255) cATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAAcc > 1:10712/1‑149 (MQ=255) cATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAAc < 8:207183/148‑1 (MQ=255) tCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGCGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTg < 1:107373/149‑1 (MQ=255) ttCGGCTTGACGCTTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGAcc < 3:85065/149‑1 (MQ=255) gCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTgg > 3:364013/1‑149 (MQ=255) aCGCGTGAAATTTTTAATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTTTTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGaa < 7:199395/149‑1 (MQ=255) gcgTTAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGTAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACt < 7:181769/149‑1 (MQ=255) gTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTgg > 5:98366/1‑149 (MQ=255) gAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGc < 4:48232/148‑1 (MQ=255) aaaTTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGcc < 4:110869/148‑1 (MQ=255) aaTTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGa < 7:321137/149‑1 (MQ=255) ttttCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAgcg > 7:250685/1‑149 (MQ=255) aTGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATc > 6:92739/1‑148 (MQ=255) | GGGCTGGAGGATTCAGCCACGAGGCTACTCGCCGAGCGCCTGTAAAGAAACCCGCGCCACCGCAGCCAATCCGCCACGTTGCGCAGCAAGCCCTCTGTGGGCGGCTGCAC‑ATTTCCATCGTTCGGCTTGACGCGTGAAATTTTTCATGTAAATTTTCATGAAAAATAAGTCTAAAAATTTCACGGCAGTCCGAAACGATGAAGATGCACGAAGAGGTTGAAGCCCTCGCGATCCTTATTCACGACCTGCGCAAATTCAAGAACCTGACCTTGGGTGAACTGGCCGAGCGCATC > NC_002947/2482356‑2482648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |