| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 58,627 | G→C | 6.3% | intergenic (‑538/+150) | PP_5424 ← / ← PP_0050 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 58,627 | 0 | G | C | 6.3% | 289.5 / 6.2 | 90 | intergenic (‑538/+150) | PP_5424/PP_0050 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (48/35); new base C (3/3); total (51/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01 | |||||||||||
AACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAAC > NC_002947/58483‑58774 | aaCCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCtgt < 5:19492/146‑1 (MQ=255)aaCCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGa > 2:133780/1‑148 (MQ=255) cccAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGaa > 8:87866/1‑147 (MQ=255) aGGTCGCCAGACTAGGAGCTAAAGGATCGCTGAGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCAc < 8:204667/149‑1 (MQ=255) ggTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccga < 6:199636/149‑4 (MQ=255) gTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCAccc > 5:232980/1‑149 (MQ=255) gCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCtt > 4:235807/1‑149 (MQ=255) ccAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTc < 1:133780/149‑1 (MQ=255) cAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCa > 7:146464/1‑149 (MQ=255) cAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCa > 2:126337/1‑149 (MQ=255) tAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTc > 8:118865/1‑148 (MQ=255) tAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑aaaaa > 2:338643/1‑148 (MQ=255) aaaGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑aaaaaa > 3:192740/1‑148 (MQ=255) aaGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑aaaaaaaa > 4:386803/1‑149 (MQ=255) aaGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑aaaaaaaa > 4:209906/1‑149 (MQ=255) aaGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑aaaaaaaa < 3:386803/149‑1 (MQ=255) aGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAAt < 6:232980/149‑1 (MQ=255) aGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAAt < 7:108218/149‑1 (MQ=255) gATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATgg > 2:363476/1‑149 (MQ=255) cTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACACCTTCATTTCAC‑AAAAAAAATGGCg > 3:310334/1‑146 (MQ=255) cGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGa < 8:146464/147‑1 (MQ=255) gACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGAtt > 3:371672/1‑148 (MQ=255) gACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTc < 3:235807/149‑1 (MQ=255) actactCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTcc < 1:338643/149‑1 (MQ=255) ctcctcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCa < 1:13805/110‑1 (MQ=255) ctcctcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCa > 2:13805/1‑110 (MQ=255) cctcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAAttt > 3:141951/1‑148 (MQ=255) tcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACGCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCAc > 5:355973/1‑149 (MQ=255) tcATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCAc > 4:140469/1‑149 (MQ=255) aTCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACg < 1:126337/148‑1 (MQ=255) tCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACggg < 8:178533/149‑1 (MQ=255) ccTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGt > 4:316881/1‑149 (MQ=255) cTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATTGCGAAGATTCCAATTTCACGGGGTc > 2:264148/1‑149 (MQ=255) ccGAAAAGTCACGCTTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGc > 2:189114/1‑149 (MQ=255) ccGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTTTGGc < 7:118865/149‑1 (MQ=255) cGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGcc > 2:206/1‑149 (MQ=255) cGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGcc > 5:243286/1‑149 (MQ=255) cGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGcc > 7:28944/1‑149 (MQ=255) gAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccga < 5:35747/96‑4 (MQ=255) gAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccga > 6:35747/1‑93 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTcac > 7:375449/1‑107 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTcac < 8:375449/107‑1 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCAc < 2:187260/136‑1 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCAc > 1:187260/1‑136 (MQ=255) aaaaGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTa > 8:37487/1‑149 (MQ=255) aaaaGTCAAGCGTCGGTCGTAAACGGCCCTTTCCACGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTCTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAAAGGCGAAGATTCCAATTTCAAGGGGTCTGGCCt > 4:32877/1‑148 (MQ=255) tCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCAc > 6:71450/1‑148 (MQ=255) gcgTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTAtt < 4:192740/149‑1 (MQ=255) gtcggtcgTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTACAATTTAACGGGGTATGGCCTATAACCTAtttt > 6:378705/1‑149 (MQ=255) cggtcgTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTtgt > 5:197056/1‑149 (MQ=255) ggtcgTAAACGGCCCTTTCCAGTCCAATCAACTTTTGTGATTGGTGAGTAGTGATTTCTCGGCTTTTCTTTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTtgtg < 5:378705/149‑1 (MQ=255) ggtcgTAAACGGCCCTTTCCAGTCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGGACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTtgtg < 4:160636/149‑1 (MQ=255) ggtcgTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTtgt < 6:355973/148‑1 (MQ=255) gTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAAc < 6:197056/148‑1 (MQ=255) tAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAAcc > 2:183018/1‑148 (MQ=255) tAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccg < 1:243380/75‑3 (MQ=255) tAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCACAGAAAAGccg > 2:243380/1‑73 (MQ=255) cGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACaa < 7:37487/149‑1 (MQ=255) ggCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAg < 1:206/149‑1 (MQ=255) cccTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGgt > 8:382089/1‑149 (MQ=255) cccTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGgt > 3:157719/1‑149 (MQ=255) ccTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGgtg < 3:316881/149‑1 (MQ=255) cTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGgtgt < 1:363476/149‑1 (MQ=255) ggCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGc > 8:386008/1‑149 (MQ=255) ggCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGc < 4:371672/149‑1 (MQ=255) ggCCAATCAACTTTTGTGATTGGCGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAACGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGc < 7:87866/149‑1 (MQ=255) ccAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCa < 8:28944/149‑1 (MQ=255) aaTCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAg > 7:149008/1‑148 (MQ=255) aaTCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGa < 3:140469/149‑1 (MQ=255) tCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGac > 1:157955/1‑148 (MQ=255) tCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑‑AAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGacac > 1:108103/1‑149 (MQ=255) gtgATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGc > 7:336753/1‑149 (MQ=255) aGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCtgctgc > 3:295997/1‑149 (MQ=255) tAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCgg > 5:243860/1‑149 (MQ=255) gggATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGc > 6:369047/1‑149 (MQ=255) gggATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGc > 2:401025/1‑149 (MQ=255) ggATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCt > 5:247/1‑149 (MQ=255) gATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCtt < 8:149008/149‑1 (MQ=255) ttCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCttttt < 7:386008/149‑1 (MQ=255) tctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATTGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCttttt < 8:336753/148‑1 (MQ=255) tctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGACTATCACCTATTTTGTGAACGTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGTCttttt < 6:243286/148‑1 (MQ=255) ctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTa < 6:247/148‑1 (MQ=255) ctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTa < 1:189114/148‑1 (MQ=255) ctcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTa < 1:264148/148‑1 (MQ=255) tcGGCTTTTCTGTGAAAAGCACGACTTAATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCGTATCACGTATTTTGTGAACCTACAAGGTGTAATTCGCCAGac > 7:260818/1‑117 (MQ=255) tcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGac < 8:260818/117‑1 (MQ=255) tcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGt > 8:176227/1‑149 (MQ=255) tcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGt > 2:112827/1‑149 (MQ=255) tcGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGATGCGGGCTTTTTAGt > 3:111236/1‑149 (MQ=255) gCTTTTCTGTGCAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGcc < 7:92666/149‑1 (MQ=255) ttttCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTg > 1:404894/1‑149 (MQ=255) gtgAAAAGCACCCCTTCATTTCACAAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTgtc < 8:173807/142‑3 (MQ=255) gtgAAAAGCACCCCTTCATTTCACAAAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTgtc > 7:173807/1‑140 (MQ=255) gtgAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAAc > 3:232400/1‑148 (MQ=255) | AACCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGCCAATCAACTTTTGTGATTGGTGAGTAGGGATTTCTCGGCTTTTCTGTGAAAAGCACCCCTTCATTTCAC‑AAAAAAAATGGCGAAGATTCCAATTTCACGGGGTCTGGCCTATCACCTATTTTGTGAACCTACAAGGTGTAATTCGCCAGACACTAAAAAGCCCGCTGCTGCGGGCTTTTTAGTGCCTGCAAAC > NC_002947/58483‑58774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |