Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,650,985 A→G 6.0% Q61R (CAG→CGG)  PP_2323 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,650,9850AG 6.0% 193.7 / 2.2 66Q61R (CAG→CGG) PP_2323hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (34/28);  new base G (2/2);  total (36/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01

AACGATTACAATCGTCCAATGGTCGAAGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGCTGCCGCCCTGACCGAGCG  >  NC_002947/2650837‑2651132
                                                                                                                                                    |                                                                                                                                                   
aaCGATTACAATCGTCCAATGGTCGAAGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCa                                                                                                                                                     <  3:76471/149‑1 (MQ=255)
 aCGATTACAATCGTCCAATGGTCGAAGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAg                                                                                                                                                    <  5:277186/149‑1 (MQ=255)
    aTTACAATCGTCCAATGGTCGAAGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGcc                                                                                                                                                 <  5:195335/149‑1 (MQ=255)
     ttACAATCGTCCAATGGTCGAAGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCg                                                                                                                                                <  4:85607/149‑1 (MQ=255)
       aCAATCGTCCAATGGTCGAAGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGt                                                                                                                                              >  3:19331/1‑149 (MQ=255)
                cAATGGTCGAAGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTc                                                                                                                                     >  4:37889/1‑149 (MQ=255)
                     gTCGAAGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGAc                                                                                                                                <  5:357318/149‑1 (MQ=255)
                         aaGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAAc                                                                                                                            <  8:388559/149‑1 (MQ=255)
                              gCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCgaga                                                                                                                                 >  5:169436/1‑139 (MQ=255)
                              gCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCgaga                                                                                                                                 <  6:169436/139‑1 (MQ=255)
                              gCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGa                                                                                                                       >  5:330156/1‑149 (MQ=255)
                               cAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGAc                                                                                                                      <  6:330156/149‑1 (MQ=255)
                                        gCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGt                                                                                                             <  3:37889/149‑1 (MQ=255)
                                           tAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGc                                                                                                           >  4:3675/1‑148 (MQ=255)
                                           tAGAGGATTCTGTGCAGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGCCCCTCCACCATGACCAGGCGGGTCATCAGTTCGAGCGCAGCGTGGAGGGGGATCGTGcg                                                                                                          >  8:68942/1‑148 (MQ=255)
                                                gATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACtt                                                                                                     >  4:116274/1‑149 (MQ=255)
                                                     tgtgCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACg                                                                                                 >  4:135886/1‑148 (MQ=255)
                                                       tgCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACg                                                                                                 <  3:135886/146‑1 (MQ=255)
                                                           ggATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGtcatca                                                                                                                                         <  2:235880/102‑1 (MQ=255)
                                                           ggATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGtcatca                                                                                                                                         >  1:235880/1‑102 (MQ=255)
                                                            gATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGc                                                                                                           <  5:45335/131‑1 (MQ=255)
                                                            gATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGc                                                                                                           >  6:45335/1‑131 (MQ=255)
                                                                 accaccATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTgg                                                                                    >  8:11155/1‑149 (MQ=255)
                                                                  ccaccaTCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTggg                                                                                   <  4:53810/149‑1 (MQ=255)
                                                                  ccaccaTCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTggg                                                                                   <  8:42939/149‑1 (MQ=255)
                                                                   caccaTCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGt                                                                                                >  7:99149/1‑135 (MQ=255)
                                                                   caccaTCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGt                                                                                                <  8:99149/135‑1 (MQ=255)
                                                                   caccaTCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTggg                                                                                   >  2:214309/1‑148 (MQ=255)
                                                                     ccaTCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTggac                                                                                  >  3:76566/1‑145 (MQ=255)
                                                                        tCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCa                                                                             <  2:226563/149‑1 (MQ=255)
                                                                          ggTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGa                                                                           <  7:11155/149‑1 (MQ=255)
                                                                           gTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGAc                                                                          >  2:14286/1‑149 (MQ=255)
                                                                           gTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGACAAGCAGAc                                                                          <  4:76566/149‑1 (MQ=255)
                                                                            ttAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACg                                                                         <  4:19331/149‑1 (MQ=255)
                                                                              aaggtaaggGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGTCAGCAGACGCt                                                                       >  1:141322/1‑149 (MQ=255)
                                                                               aggtaaggGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTa                                                                                                        >  6:18918/1‑115 (MQ=255)
                                                                               aggtaaggGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTa                                                                                                        <  5:18918/115‑1 (MQ=255)
                                                                                ggtaaggGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGc                                                                              <  4:108491/140‑1 (MQ=255)
                                                                                ggtaaggGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGc                                                                              >  3:108491/1‑140 (MQ=255)
                                                                                 gtaaggGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTgg                                                                     >  8:257599/1‑148 (MQ=255)
                                                                                 gtaaggGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGa                                                                    <  3:3675/149‑1 (MQ=255)
                                                                                       gTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTa                                                              >  3:135076/1‑149 (MQ=255)
                                                                                        tCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTAt                                                             >  8:249727/1‑149 (MQ=255)
                                                                                            ccGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGt                                                                                                <  7:222391/110‑1 (MQ=255)
                                                                                            ccGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGt                                                                                                >  8:222391/1‑110 (MQ=255)
                                                                                             cGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACAATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATATGGGAAAGCAGACGCTGGACATCTATCGCAc                                                        >  3:401303/1‑149 (MQ=255)
                                                                                                         cGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCaa                                            <  4:135076/149‑1 (MQ=255)
                                                                                                               gtagtGATGAGCGAAGCGCTGACCATCCACCATGACGAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGt                                                  <  6:331449/137‑1 (MQ=255)
                                                                                                               gtagtGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCAc                                                        >  3:146275/1‑131 (MQ=255)
                                                                                                               gtagtGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCAc                                                        <  4:146275/131‑1 (MQ=255)
                                                                                                               gtagtGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGt                                                  >  5:331449/1‑137 (MQ=255)
                                                                                                                tagtGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTg                                     >  2:139324/1‑149 (MQ=255)
                                                                                                                     atgaGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACATTCGTGCCCAACGCCCTGCGCgg                                >  3:304141/1‑149 (MQ=255)
                                                                                                                      tgaGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCgg                                <  7:249727/148‑1 (MQ=255)
                                                                                                                        aGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCg                             >  8:317299/1‑149 (MQ=255)
                                                                                                                                  tGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGCt                   >  8:294773/1‑149 (MQ=255)
                                                                                                                                      cATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGCTgccg               >  3:311129/1‑149 (MQ=255)
                                                                                                                                       aTCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGCTgccgc              >  1:410965/1‑149 (MQ=255)
                                                                                                                                       aTCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGCTgccgc              >  7:245983/1‑149 (MQ=255)
                                                                                                                                            tgaTGACCGGCCTGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGt                            <  4:100972/128‑1 (MQ=255)
                                                                                                                                            tgaTGACCGGCCTGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGt                            >  3:100972/3‑130 (MQ=255)
                                                                                                                                            ccaTGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGCTGCCGCCCTGa         >  5:154426/1‑149 (MQ=255)
                                                                                                                                              aTGACCGGCCTGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTg                                                 >  6:29920/1‑107 (MQ=255)
                                                                                                                                              aTGACCGGCCTGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTg                                                 <  5:29920/107‑1 (MQ=255)
                                                                                                                                                 aCCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGc                    >  2:19375/1‑133 (MQ=255)
                                                                                                                                                 aCCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGc                    <  1:19375/133‑1 (MQ=255)
                                                                                                                                                   cAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGCTGCCGCCCTGACCGAGCg  <  2:410965/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AACGATTACAATCGTCCAATGGTCGAAGCGGCAACAGGTGGCATAGAGGATTCTGTGCCGGATAAACCACCATCGGTTAAGGTAAGGGTCTGCCGAGAAGACCTGCGAGGAGTAGTGATGAGCGAAGCGCTGACCATCCACCATGACCAGGCCGGTCATCAGTTCGAGACCAACGTGGACGGTCATCGTGCCTACTTGACGTACATGGATCTGGGCAAGCAGACGCTGGACATCTATCGCACCTTCGTGCCCAACGCCCTGCGCGGCCGTGGGATCGCTGCCGCCCTGACCGAGCG  >  NC_002947/2650837‑2651132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑