| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,674,831 | A→C | 7.4% | intergenic (+82/+224) | PP_2343 → / ← PP_2344 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,674,831 | 0 | A | C | 7.4% | 288.6 / 9.5 | 92 | intergenic (+82/+224) | PP_2343/PP_2344 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (44/41); new base C (5/2); total (49/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATCCCAAGCCCAGC > NC_002947/2674683‑2674976 | cGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTgga < 8:239750/149‑1 (MQ=255) aaCCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGa < 4:34042/149‑1 (MQ=255) aCCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGa > 3:364712/1‑148 (MQ=255) aCCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGAt > 1:381430/1‑149 (MQ=255) gCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCtgt < 2:381430/149‑1 (MQ=255) gCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCtgt > 2:322478/1‑149 (MQ=255) gCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCtgt > 4:258096/1‑149 (MQ=255) ccTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCATGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTgtgt < 1:322478/149‑1 (MQ=255) gATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAAGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCtgt > 6:367369/1‑142 (MQ=255) gATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAAGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCtgt < 5:367369/142‑1 (MQ=255) tCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAAt < 8:37832/149‑1 (MQ=255) aCCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCTTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATgg < 7:56343/149‑1 (MQ=255) aCCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATg < 4:364712/148‑1 (MQ=255) aGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTg < 3:258096/149‑1 (MQ=255) cGTGTTTTGAACGGGGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGcc < 8:274570/149‑1 (MQ=255) gAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATcgac > 3:62291/1‑147 (MQ=255) aaCGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGGTGGAACGGGGGCCATCGACG‑Ag > 4:111113/1‑149 (MQ=255) gTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGa > 4:285250/1‑149 (MQ=255) tCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGc < 5:96325/121‑1 (MQ=255) tCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGc > 6:96325/1‑121 (MQ=255) tCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATcgac < 7:186836/137‑1 (MQ=255) tCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATcgac > 8:186836/1‑137 (MQ=255) tCCCAATGAAAGCCCAAAAGGTAGCACGCGTGTCGACTAAGCCCCACCAGGCATCGACTATGTCAGAGTTTTTCCCCCACGGGTCCGTCAAGCAGAGACGATCTGTGTATCGAATGCCTGCAACGGCTGCCATACACG‑AGCAGAAGGAt > 6:155895/1‑149 (MQ=255) ccAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGAtgt > 7:245487/1‑149 (MQ=255) ccAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGAtg < 7:47491/148‑1 (MQ=255) aaTGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCt > 6:250745/1‑124 (MQ=255) aaTGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCt < 5:250745/124‑1 (MQ=255) aaTGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGa > 6:24814/1‑149 (MQ=255) gAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTc > 8:353518/1‑149 (MQ=255) aaGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGc > 4:383541/1‑149 (MQ=255) gAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAg > 7:290454/1‑148 (MQ=255) aaaaGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGc > 2:401429/1‑148 (MQ=255) aaGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCaaa < 3:285250/149‑1 (MQ=255) tAGCAGGCGTGTCGACT‑AGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTg > 2:405970/1‑149 (MQ=255) aGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTg > 6:64449/1‑149 (MQ=255) gCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTgg < 8:312290/149‑1 (MQ=255) gACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCtgt < 2:136229/72‑1 (MQ=255) gACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCtgt > 1:136229/1‑72 (MQ=255) aCTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATgg > 4:153774/1‑82 (MQ=255) aCTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATgg < 3:153774/82‑1 (MQ=255) aCTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTg < 7:217057/136‑1 (MQ=255) aCTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTg > 8:217057/1‑136 (MQ=255) aCTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTAt < 5:24814/149‑1 (MQ=255) aCTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTAt < 1:165160/149‑1 (MQ=255) aCTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTAt > 2:337943/1‑149 (MQ=255) tAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATgg > 2:287184/1‑149 (MQ=255) ccccACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCaa < 3:151120/149‑1 (MQ=255) ccccACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCaa > 7:100713/1‑149 (MQ=255) cccACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAg < 3:383541/149‑1 (MQ=255) ccACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGt > 5:295453/1‑149 (MQ=255) gAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTa > 6:358747/1‑136 (MQ=255) gAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTa < 5:358747/136‑1 (MQ=255) aGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCaa > 3:6367/1‑148 (MQ=255) gCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAAt < 7:353518/149‑1 (MQ=255) cATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAg < 2:241725/130‑1 (MQ=255) cATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAg > 1:241725/1‑130 (MQ=255) aTCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTgtgt < 2:311855/56‑1 (MQ=255) aTCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTgtgt > 1:311855/1‑56 (MQ=255) aTCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAAtgt > 4:178430/1‑149 (MQ=255) gACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAg < 4:6367/149‑1 (MQ=255) aCTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGc < 3:178430/149‑1 (MQ=255) tATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTgg > 6:249817/1‑114 (MQ=255) tATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTgg < 5:249817/114‑1 (MQ=255) tATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAAtt < 6:413714/120‑1 (MQ=255) tGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGtt < 8:245487/148‑1 (MQ=255) cTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAAtg < 7:202650/137‑1 (MQ=255) cTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAAtg > 8:202650/1‑137 (MQ=255) cTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACt < 4:62291/149‑1 (MQ=255) cTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACt > 6:360444/1‑149 (MQ=255) tGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGt < 2:365537/128‑1 (MQ=255) tGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGt > 1:365537/1‑128 (MQ=255) tGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTc > 7:370764/1‑149 (MQ=255) tGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTc > 2:308315/1‑149 (MQ=255) tcgtctctcctccACGGACCCGTGGCGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGCGCGTTCACTcc > 4:324856/8‑149 (MQ=255) gAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGAtg < 2:384378/85‑1 (MQ=255) gAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGAtg > 1:384378/1‑85 (MQ=255) tttttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGAt > 7:218765/1‑86 (MQ=255) tttttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGAt < 8:218765/86‑1 (MQ=255) tttttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCaa < 7:361947/122‑1 (MQ=255) tttttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCaa > 8:361947/1‑122 (MQ=255) tttttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGcc < 1:401429/149‑1 (MQ=255) ttttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGcc > 4:28356/1‑148 (MQ=255) ttttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGcc < 5:64449/148‑1 (MQ=255) ctctcctccACGGACCCGTGGCGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGcc > 1:307140/4‑148 (MQ=255) tttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCt < 8:100713/148‑1 (MQ=255) cctccACGGACCCGTGGCGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTACCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGt > 1:111562/4‑148 (MQ=255) ctccACGGACCCGTGGCGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTaa > 8:387974/3‑149 (MQ=255) tccACGGACCCGTGGCGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTc > 5:198567/2‑81 (MQ=255) tccACGGACCCGTGGCGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTc < 6:198567/80‑1 (MQ=255) ccACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATc > 8:241870/1‑149 (MQ=255) ggacccGTGGCGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATCCCaa < 7:387974/145‑1 (MQ=255) gTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAg < 5:107156/134‑1 (MQ=255) gTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAg > 6:107156/1‑134 (MQ=255) gaggagATACGATCTGTGTATCGAATTGCTGCAACGGCTGCCATCGACGTCTTATAAGGATGTATTTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATCCCAagcccagc < 1:337943/148‑1 (MQ=255) | CGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACG‑AGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATCCCAAGCCCAGC > NC_002947/2674683‑2674976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |