| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 388,722 | T→A | 5.6% | L198Q (CTG→CAG) | soxB → | sarcosine oxidase subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 388,722 | 0 | T | A | 5.6% | 275.7 / 4.9 | 89 | L198Q (CTG→CAG) | soxB | sarcosine oxidase subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (44/39); new base A (2/3); total (47/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.95e-01 | |||||||||||
CACTGCCCAGGTTGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCGGGCACATGGCCAAGC > NC_002947/388576‑388868 | cacTGCCCAGGTTGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTgg > 3:93272/1‑149 (MQ=255)cacTGCCCAGGTTGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTgg < 2:143018/149‑1 (MQ=255) ccAGGTTGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTc > 2:167851/1‑148 (MQ=255) cAGGTTGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGa > 8:28421/1‑149 (MQ=255) ggTTGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGAcc > 3:81475/1‑149 (MQ=255) gTTGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCAGGGCGTCggcag < 6:261437/149‑5 (MQ=255) cGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCCGGGCGTCGACCGGagc > 8:61760/1‑147 (MQ=255) ggCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGCCTTCGCCCTCGCTGCCGACGCCCTGCGCGTCGACCTGATc > 2:319747/1‑148 (MQ=255) ccGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCg > 2:158253/1‑148 (MQ=255) cGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGaa < 3:86518/149‑1 (MQ=255) cGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGaa < 6:127997/149‑1 (MQ=255) gTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAg < 1:167851/149‑1 (MQ=255) tACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGt < 1:158253/149‑1 (MQ=255) tGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATc > 1:273315/1‑149 (MQ=255) gACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATc < 1:250676/147‑1 (MQ=255) gACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATc < 4:81475/147‑1 (MQ=255) gACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCgg > 8:118129/1‑149 (MQ=255) cTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTcc > 3:402521/1‑149 (MQ=255) cTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTcc > 7:341361/1‑149 (MQ=255) cTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGAACCAGCAAACCAAACTGAACGGCTTcc > 8:57151/1‑149 (MQ=255) tCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGAcc > 6:351442/1‑118 (MQ=255) tCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGAcc < 5:351442/118‑1 (MQ=255) tCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCg > 3:242284/1‑149 (MQ=255) tCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCg > 1:280291/1‑149 (MQ=255) gaagaaCACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATc < 2:239879/139‑1 (MQ=255) gaagaaCACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATc > 1:239879/1‑139 (MQ=255) aagaaCACCCGCTACCTGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCaa < 6:403179/149‑1 (MQ=255) aagaaCACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGAt < 6:4593/119‑1 (MQ=255) aagaaCACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGAt > 5:4593/1‑119 (MQ=255) acacCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATc < 2:360351/116‑1 (MQ=255) acacCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATc > 1:360351/1‑116 (MQ=255) cccGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCg > 3:323413/1‑132 (MQ=255) cccGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCg < 4:323413/132‑1 (MQ=255) ccGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACg < 4:93272/149‑1 (MQ=255) ccGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACg > 2:375821/1‑149 (MQ=255) ccGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACg > 2:151307/1‑149 (MQ=255) ccGCTACCCGATCCTCGGCGCCACCATACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACg > 3:353120/1‑149 (MQ=255) cGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGTCGACGCCCAGGGCGTCggca < 2:275799/106‑4 (MQ=255) cGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGTCGACGCCCAGGGCGTCggca > 1:275799/1‑103 (MQ=255) cGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACgg < 2:273315/149‑1 (MQ=255) cccGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCgg > 6:395124/1‑149 (MQ=255) ccGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCggc > 6:113304/1‑148 (MQ=255) aTCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCAt < 8:341361/149‑1 (MQ=255) aTCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCAt < 3:98970/149‑1 (MQ=255) cGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTgg < 3:236379/83‑1 (MQ=255) cGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTgg > 4:236379/1‑83 (MQ=255) ggCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGgtgt < 7:301664/149‑1 (MQ=255) ggCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGgtgt < 2:280291/149‑1 (MQ=255) gcgcCACCGTACAGCGCCGTGGTGGCTTTCCCCTACACGATGCCGTGCCATGGGCATACGCCCCCCATCCCCACCCCATGGCCTTCGCCATGATCCCGCAAACCTAAGTGAACGGATTCCCAAAGTAAAACGCCCCGGACAACGttgt > 2:62990/1‑148 (MQ=255) gcgcCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGtgtg > 2:79150/1‑149 (MQ=255) catcACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGtgtg < 3:34568/145‑1 (MQ=255) cACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGaaa > 7:4711/1‑149 (MQ=255) aCCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAAc < 4:402521/149‑1 (MQ=255) aCCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAAc > 6:375310/1‑149 (MQ=255) aCAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGaa > 7:345077/1‑97 (MQ=255) aCAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGaa < 8:345077/97‑1 (MQ=255) aCAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACcaac > 7:253739/1‑148 (MQ=255) aGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACcaaca > 4:134741/1‑147 (MQ=255) aGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACcaaca > 2:12670/1‑147 (MQ=255) cgcCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAgg < 1:12670/149‑1 (MQ=255) ggcGTGGTTGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGc < 1:62990/147‑1 (MQ=255) gtggtgGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTc < 4:242284/149‑1 (MQ=255) ggCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCgg > 7:25354/1‑149 (MQ=255) ttGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGcc < 7:61760/149‑1 (MQ=255) cgcGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAGACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCaa < 1:319747/146‑1 (MQ=255) gTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAgcgc < 5:375310/149‑1 (MQ=255) aCGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGcgcg > 5:205621/1‑101 (MQ=255) aCGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGcgcg < 6:205621/101‑1 (MQ=255) aCGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGt < 7:28421/148‑1 (MQ=255) cGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCg < 7:118129/149‑1 (MQ=255) aTGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATTGGCGCCAAGCGCGTCGGc > 3:116268/1‑149 (MQ=255) ccGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCTCGTCGGCGt < 1:151307/148‑1 (MQ=255) ccGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTg < 8:4711/149‑1 (MQ=255) cGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTgg > 1:184981/1‑149 (MQ=255) cGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTgg > 1:108261/1‑149 (MQ=255) gTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGt < 3:134741/149‑1 (MQ=255) gTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGt < 2:108261/149‑1 (MQ=255) gggCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCAccgccg < 2:184981/149‑1 (MQ=255) ttCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGAAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTaa > 3:59813/1‑149 (MQ=255) gcgcTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCggg < 8:25354/149‑1 (MQ=255) tcaggtcGACGCCCAGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCggg > 8:9854/7‑148 (MQ=255) tGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCGGGcaca > 3:152782/1‑149 (MQ=255) tGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCGGGcac > 8:74516/1‑148 (MQ=255) tGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGAGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGACAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCGGGccca > 7:169018/1‑149 (MQ=255) cGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCGGGCACATgg > 7:373104/1‑149 (MQ=255) cGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCGGGCACATgg > 7:367671/1‑149 (MQ=255) gACGCCCAGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCGGGCACATGGc < 7:9854/149‑1 (MQ=255) gCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTc > 8:22576/1‑120 (MQ=255) ccTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGCCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCGGGCACATGGCCAAGc < 5:113304/149‑1 (MQ=255) | CACTGCCCAGGTTGCGGCCGAAATCCCGTACCTGGACTGCTCGAAGAACACCCGCTACCCGATCCTCGGCGCCACCGTACAGCGCCGTGGTGGCGTTGCCCGTCACGATGCCGTGGCCTGGGGCTTCGCCCGCGCTGCCGACGCCCTGGGCGTCGACCTGATCCAGCAAACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCGGCGTGGTCACCGCCGGTAACTCCGGGCACATGGCCAAGC > NC_002947/388576‑388868 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |