| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,030,413 | C→G | 7.5% | intergenic (+413/‑281) | pcaY → / → mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,030,413 | 0 | C | G | 7.5% | 218.1 / 6.2 | 67 | intergenic (+413/‑281) | pcaY/mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base C (29/33); new base G (2/3); total (31/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.23e-01 | |||||||||||
GCCGCCGCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAA > NC_002947/3030267‑3030558 | gccgccgccGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑ccccc < 4:313223/147‑1 (MQ=255) ccgccgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCaa < 8:137835/149‑1 (MQ=255) ccgccgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCaa < 2:265453/149‑1 (MQ=255) cgccgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAag > 3:203805/1‑149 (MQ=255) gccgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAagt < 5:398086/149‑1 (MQ=255) gccgccgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAagt < 4:203805/149‑1 (MQ=255) tGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGt > 7:53848/1‑149 (MQ=255) gCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGc < 3:146746/149‑1 (MQ=255) cGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCGCAACTACTTGGGGGGTGCTg < 5:70243/149‑1 (MQ=255) gTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGgc < 7:115669/149‑1 (MQ=255) ttGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGgcg > 1:211525/1‑149 (MQ=255) gCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCt < 1:244724/149‑1 (MQ=255) gCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGgcg > 8:84476/1‑143 (MQ=255) gCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGgcg < 7:84476/143‑1 (MQ=255) aGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCC‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt < 1:2246/149‑1 (MQ=255) cTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGc < 1:360350/149‑1 (MQ=255) aTGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCg < 3:275354/124‑1 (MQ=255) aTGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCg > 4:275354/1‑124 (MQ=255) aTGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACg > 6:207426/1‑149 (MQ=255) tCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGc > 7:37511/1‑149 (MQ=255) aCTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccc > 4:398815/1‑149 (MQ=255) cATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCg > 2:297569/1‑148 (MQ=255) gTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTtc > 5:9555/1‑149 (MQ=255) gTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTtc > 8:203395/1‑149 (MQ=255) cacaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCa < 6:9555/148‑1 (MQ=255) acaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt > 5:390381/1‑149 (MQ=255) acaTCGCCAGCCTGAGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTATGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt > 4:87535/1‑149 (MQ=255) aTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGa < 8:37511/149‑1 (MQ=255) tCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGaa > 5:76839/1‑149 (MQ=255) ccAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTc < 2:259690/113‑1 (MQ=255) ccAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCActc < 1:269516/121‑3 (MQ=255) ccAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCAcac > 2:269516/1‑119 (MQ=255) aGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATaaaa < 6:390381/149‑1 (MQ=255) aGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATaaa > 4:288637/1‑148 (MQ=255) ccTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGa < 6:76839/149‑1 (MQ=255) cGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATAtt < 1:297569/149‑1 (MQ=255) tGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTg > 1:145167/1‑148 (MQ=255) cTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCAc > 5:405740/1‑129 (MQ=255) cTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCAc < 6:405740/129‑1 (MQ=255) gcgcCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGt < 2:211525/148‑1 (MQ=255) ccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAAt > 7:189897/1‑128 (MQ=255) ccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAAt < 8:189897/128‑1 (MQ=255) ccgcGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCt < 3:398815/149‑1 (MQ=255) cgcgGCCAGGCGCGGGCCT‑GCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGat > 1:152372/1‑134 (MQ=255) cgcgGCCAGGCGCGGGCCT‑GCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGat < 2:152372/134‑1 (MQ=255) gCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTc > 7:273380/1‑148 (MQ=255) gCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTc < 8:273380/148‑1 (MQ=255) cgcgCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCGCAACTACTTGGGGGGTGCTggt < 2:299822/74‑2 (MQ=25) cgcgCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCGCAACTACTTGGGGGGTGCTggt > 1:299822/1‑73 (MQ=25) cTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGt > 8:97740/1‑128 (MQ=255) gcgTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaaaa < 7:93103/149‑1 (MQ=255) tGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcg > 2:39766/1‑149 (MQ=255) tGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcg > 6:107167/1‑149 (MQ=255) cACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTAACATGAAAAGTTcga < 2:145167/148‑2 (MQ=255) ccTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTa > 3:342026/1‑113 (MQ=255) ccTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTa < 4:342026/113‑1 (MQ=255) ccTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACt > 1:193736/1‑149 (MQ=255) caccaTCA‑CCCCCCAAGTAGTTGCTGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCtgt < 3:87535/149‑1 (MQ=255) caccaGCC‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCtgt < 7:203395/149‑1 (MQ=255) caGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGCGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt > 5:201793/1‑144 (MQ=255) caGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt < 6:201793/144‑1 (MQ=255) gCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTg > 3:231984/1‑96 (MQ=255) gCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTg < 4:231984/96‑1 (MQ=255) gCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt > 3:3014/1‑142 (MQ=255) gCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt < 4:3014/142‑1 (MQ=255) gCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTa < 3:288637/149‑1 (MQ=255) cA‑CCCCGCAACTACTTGGGGGGTGCTGGTGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGa > 7:240693/1‑128 (MQ=255) cA‑CCCCGCAACTACTTGGGGGGTGCTGGTGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGa < 8:240693/128‑1 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTAt > 7:357974/1‑145 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTAt < 8:357974/145‑1 (MQ=255) cccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaa > 7:125738/1‑147 (MQ=255) | GCCGCCGCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCA‑CCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAA > NC_002947/3030267‑3030558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |