| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 395,848 | T→G | 7.5% | intergenic (+30/+174) | fdhA → / ← PP_0329 | formaldehyde dehydrogenase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 395,848 | 0 | T | G | 7.5% | 242.7 / 10.2 | 80 | intergenic (+30/+174) | fdhA/PP_0329 | formaldehyde dehydrogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (31/43); new base G (3/3); total (34/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.49e-01 | |||||||||||
GTGGTAGGTGTGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGCCACTGC > NC_002947/395702‑395995 | gTGGTAGGTGTGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑Tc > 5:270047/1‑148 (MQ=255) gTAGGTGTGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAgg > 3:24973/1‑149 (MQ=255) gtgCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCttt > 1:297624/1‑149 (MQ=255) tgCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCttt < 1:118998/148‑1 (MQ=255) tgCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCttt < 1:212617/148‑1 (MQ=255) gCAGGTGATCAACCTGGATCAAGCGCCGGAATGGTCTGGCGAGTTTGATGCTGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCttttt < 6:237548/149‑1 (MQ=255) cAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCttttt < 2:274039/148‑1 (MQ=255) cAGGAGATCAACCTGGATCAGGCGGCGGAAGTGTATGGCGAGTTTCATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCttttt < 6:7926/148‑1 (MQ=255) aGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGt < 4:254387/149‑1 (MQ=255) aGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGt > 4:8852/1‑149 (MQ=255) aGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAAAGCCCCTCGAT‑GCGAGGGGCtctttag > 3:397914/1‑147 (MQ=255) aGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAAAGCCCCTCGAT‑GCGAGGGGCtctt < 4:397914/146‑1 (MQ=255) tGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑Ca < 2:230392/149‑1 (MQ=255) aaCCTGGATCAGGCTCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGTCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCt < 7:163102/148‑1 (MQ=255) aCCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGATCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGa > 7:172882/1‑149 (MQ=255) aCCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGa < 1:370329/149‑1 (MQ=255) gATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATaa < 6:270047/147‑1 (MQ=255) cAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCACTCGAGGGGCTTTTTGTC‑CATTCTGATAAg < 1:30149/146‑1 (MQ=255) cAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAg > 2:30149/1‑145 (MQ=255) aGGCGCCGGAAGGGTATGGCGAGTTTGATGCGGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACAtc > 2:55483/1‑149 (MQ=255) ggCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGT‑AAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACAtctc > 6:312597/1‑149 (MQ=255) ccGGAAGGGTATGGGGAGTTTGATGGAGGTGTGCCTAAGAAATTCGTTATCGACACGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAATAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGc < 8:172882/149‑1 (MQ=255) ggAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCATAATCAGCGTCGAGTAAAAAGAGCCCCTCGAT‑GCGAGGGGCtctttt < 2:184728/123‑2 (MQ=255) ggAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCATAATCAGCGTCGAGTAAAAAGAGCCCCTCGAT‑GCGAGGGGCtctttt > 1:184728/1‑122 (MQ=255) aaGTGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGa < 3:243423/149‑1 (MQ=255) aGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTAGCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAg < 6:420646/149‑1 (MQ=255) gTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCtttt > 1:139352/1‑115 (MQ=255) gTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCtttt < 2:139352/115‑1 (MQ=255) gTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTg > 3:146128/1‑149 (MQ=255) tGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCtt < 2:383145/149‑1 (MQ=255) ggCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTg > 6:118575/1‑149 (MQ=255) gCGAGTTTGATGCGGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTCACATTCTGATAAGACATCTCGGCCGGAGGTGCTTg < 1:55483/149‑1 (MQ=255) cGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTc < 7:7143/149‑1 (MQ=255) cGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTc < 4:237345/149‑1 (MQ=255) gTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCTTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGc < 1:143626/141‑1 (MQ=255) gTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCAt < 2:297624/148‑1 (MQ=255) ttGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATaa < 4:24973/148‑1 (MQ=255) ttGATGCACGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCTGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCGTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATaa < 1:165838/148‑1 (MQ=255) gATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGGTTGTCATAAGcg > 7:142407/1‑148 (MQ=255) gATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGc < 3:8852/148‑1 (MQ=255) ccGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCttt > 5:425759/1‑149 (MQ=255) ccGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCtt < 8:44318/148‑1 (MQ=255) cGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCtttt > 2:38999/1‑149 (MQ=255) aagaaATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGt > 6:234706/1‑120 (MQ=255) aagaaATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGt < 5:234706/120‑1 (MQ=255) gaaATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAg > 3:123654/1‑149 (MQ=255) aaTTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTAGCA‑TAGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTc > 6:78320/1‑149 (MQ=255) gTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGa > 3:213460/1‑108 (MQ=255) gTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGa < 4:213460/108‑1 (MQ=255) tATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGCGGTGCTTGTCATAAGCATTTCATCGCTTTTGAAGTCGAGcgcc > 3:357235/1‑149 (MQ=255) tCGACCCGAACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTTATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGcgccgc > 7:145176/1‑149 (MQ=255) cGACCCGCACAATATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGc < 4:173394/108‑1 (MQ=255) cGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACAtc < 5:309527/94‑1 (MQ=255) cGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACAtc > 6:309527/1‑94 (MQ=255) ccGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGca > 2:362576/1‑149 (MQ=255) gCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGcaca > 1:244920/1‑149 (MQ=255) caAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGATCGCCGCCCGCACATAc < 4:123654/149‑1 (MQ=255) caAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATAc < 4:146128/149‑1 (MQ=255) aaaaTGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑AATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGAGCCGCCCGCACATAcc > 6:388070/1‑149 (MQ=255) gggggTTCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCtcatca < 5:20620/148‑1 (MQ=255) cggcgTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCg < 7:16257/148‑1 (MQ=255) ggcgTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGACGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGaa < 6:112363/149‑1 (MQ=255) ggcgTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGaa < 5:118575/149‑1 (MQ=255) aaTCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACAt < 2:227357/127‑1 (MQ=255) aaTCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACAt > 1:227357/1‑127 (MQ=255) aGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGt > 6:350360/1‑147 (MQ=255) aGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGccc < 1:160737/149‑1 (MQ=255) gTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCATTTCATCGCTTTTGAAGTCGAGCGCCGACCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCt > 8:79393/1‑149 (MQ=255) aaaaGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGa < 8:145176/149‑1 (MQ=255) aaaGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGa < 5:312597/148‑1 (MQ=255) aaagCCCCTCGAT‑GCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCTGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGa < 1:91217/144‑1 (MQ=255) aaagCCCCTCGAT‑GCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGa > 2:91217/3‑146 (MQ=255) ccccTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCt > 6:100670/1‑126 (MQ=255) ccccTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCt < 5:100670/126‑1 (MQ=255) cTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGcc < 6:425759/149‑1 (MQ=255) cTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGc > 2:282650/1‑148 (MQ=255) cGCA‑TCGAGGGGCGTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCt > 7:12036/1‑74 (MQ=255) cGCA‑TCGAGGGGCGTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCt < 8:12036/74‑1 (MQ=255) gCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGa < 2:171463/84‑1 (MQ=255) a‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGCCACTgc > 8:69908/1‑149 (MQ=255) | GTGGTAGGTGTGCAGGTGATCAACCTGGATCAGGCGCCGGAAGGGTATGGCGAGTTTGATGCAGGTGTGCCGAAGAAATTCGTTATCGACCCGCACAAAATGTGGGGTGCGGCGTAATCAGCGTCGAGTAAAAAGAGCCCCTCGCA‑TCGAGGGGCTTTTTGTC‑CATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCTGGAGCGAAGGGCCACTGC > NC_002947/395702‑395995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |