| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,641,826 | T→A | 7.9% | Q460L (CAG→CTG) | PP_3209 ← | isoxanthopterin deaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,641,826 | 0 | T | A | 7.9% | 220.3 / 8.1 | 76 | Q460L (CAG→CTG) | PP_3209 | isoxanthopterin deaminase |
| Reads supporting (aligned to +/- strand): ref base T (31/39); new base A (2/4); total (33/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.03e-01 | |||||||||||
GAAGGGCAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGACCGAAGTAGCGGGG > NC_002947/3641679‑3641971 | gAAGGGCAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCt < 5:426680/148‑1 (MQ=255)gAAGGGCAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTg < 2:95533/149‑1 (MQ=255) aaGGGCAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTgg < 2:260402/149‑1 (MQ=255) aaGGGCAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTgg > 2:319443/1‑149 (MQ=255) ggCAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTg < 5:114679/149‑1 (MQ=255) gCAGGGGAGCAGGGCCAGGCGTGGCCAGTTCCACACCCAGCACGTCGTCTGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCAGGC‑ACGCCAGGCTgt < 8:381977/149‑2 (MQ=255) gCAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGc > 5:275432/1‑149 (MQ=255) gCAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCAGGC‑ACGCCAGGCTgt < 8:376588/149‑2 (MQ=255) cAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGcc < 7:298888/149‑1 (MQ=255) cAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGcc < 6:79569/149‑1 (MQ=255) aGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGccc < 4:387682/149‑1 (MQ=255) ggggAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGACTGCCCa < 1:293300/149‑1 (MQ=255) gAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGGCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGtt < 5:346220/149‑1 (MQ=255) gCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCg < 5:140397/149‑1 (MQ=255) gCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCg < 3:286320/149‑1 (MQ=255) cAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCgg < 8:13239/149‑1 (MQ=255) gCCCCGGCGGGGCCAGTTCCACACCCAGCTCGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGt < 2:389941/142‑1 (MQ=255) gCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGt > 1:389941/1‑142 (MQ=255) ccccGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAg < 1:319443/149‑1 (MQ=255) ccAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAg < 3:125505/149‑1 (MQ=255) ccACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATc < 5:333299/148‑1 (MQ=255) acacCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCa > 6:215844/1‑140 (MQ=255) acacCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCa < 5:215844/140‑1 (MQ=255) cccAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCg > 3:390555/1‑149 (MQ=255) ccAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGt > 7:70048/1‑149 (MQ=255) gtcgtcGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCAc > 1:92766/1‑149 (MQ=255) tcgtcgGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACg > 8:27173/1‑149 (MQ=255) tcgGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCt > 5:369816/1‑148 (MQ=255) cTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAggc > 3:240360/1‑149 (MQ=255) ttCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAggcg > 1:374373/1‑149 (MQ=255) cAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAggcgg < 3:292020/148‑1 (MQ=255) aGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGgccg > 5:71699/1‑149 (MQ=255) ggCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGgccgc > 3:3274/1‑149 (MQ=255) cgcAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCt < 3:254496/149‑1 (MQ=255) gcAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTa > 1:322844/1‑149 (MQ=255) cAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTAc < 4:240360/149‑1 (MQ=255) aGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTAcc < 2:92766/149‑1 (MQ=255) gggCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCa < 6:275432/149‑1 (MQ=255) ccTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGccc < 2:322844/149‑1 (MQ=255) cTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCg > 6:128882/1‑149 (MQ=255) cTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCg > 6:112605/1‑149 (MQ=255) cAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGc < 4:3274/147‑1 (MQ=255) agagGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAg > 3:19978/1‑96 (MQ=255) agagGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAg < 4:19978/96‑1 (MQ=255) agagGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGc < 6:369816/149‑1 (MQ=255) gagGCGTCCAGCTCATGCCCGTACCCCCGCGCCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTCCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATACTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCg > 6:128258/1‑149 (MQ=255) ccAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAgg < 5:6577/78‑1 (MQ=255) ccAGCTCATGCGCGTACCACCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAgg > 6:6577/1‑78 (MQ=255) cAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACgg > 6:332058/1‑149 (MQ=255) cAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACgg > 8:20678/1‑149 (MQ=255) aGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGc > 5:183155/1‑149 (MQ=255) tCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCAc > 7:247914/1‑149 (MQ=255) tCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCAc > 6:22677/1‑149 (MQ=255) cATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGCAGTCCCTGGCTGCCCAGTTCGGCGAGGTCCAGGCCAGGAATCGCATCGTTTTCAACGCTCAGGCGGCCGCCTACCAGCAATCCCCCCAGCGTCGGACGGCCAc > 1:89395/1‑149 (MQ=255) aTGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAg > 6:315343/1‑81 (MQ=255) aTGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGtttt > 5:90216/1‑96 (MQ=255) aTGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGtttt < 6:90216/96‑1 (MQ=255) cgTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAAc < 6:183155/149‑1 (MQ=255) ccccGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTg > 8:19408/1‑149 (MQ=255) ccccGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGACGGACGGCCACCGCCAACCACTg > 4:231024/1‑149 (MQ=255) ccccGCGGCCTGATGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCAGCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTg < 5:128258/149‑1 (MQ=255) ccGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTggg < 6:71699/149‑1 (MQ=255) tGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGcc > 3:404604/1‑149 (MQ=255) ttGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGccc < 4:390555/148‑1 (MQ=255) ttGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGcc < 7:20678/147‑1 (MQ=255) ggCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCa < 2:89395/149‑1 (MQ=255) cGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATg < 8:247914/149‑1 (MQ=255) tgggcAGCCAGGC‑ACGCCAGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAg > 5:425426/5‑149 (MQ=255) tgggcAGCCAGGC‑ACGCCAGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAg > 7:355771/5‑149 (MQ=255) gTACAGCCTGGC‑GTGCCTTGCTGCCCAGTTCGGCGATGGCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGa < 8:70048/149‑1 (MQ=255) gTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGa < 7:27173/149‑1 (MQ=255) gCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGACCGaa < 5:22677/149‑1 (MQ=255) acgCCAGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGACCGAAGTAGCgg < 6:425426/147‑1 (MQ=255) acgCCAGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGACCGAAGTAGCgg < 8:355771/147‑1 (MQ=255) ccTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGACCGAAGTAGCgggg < 2:374373/148‑1 (MQ=255) cTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGACCGAAGTAGCggg < 4:263411/146‑1 (MQ=255) cTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGACCGAAGTAGCggg > 3:263411/1‑146 (MQ=255) tGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCTTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACTGCCACCGCCAACCACTGGGGc < 2:243494/113‑1 (MQ=255) tGGCTGCCCAGTTCGGCGACGTCCAAGCCAAGAATCGCATCGATTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGc > 1:243494/1‑113 (MQ=255) | GAAGGGCAGGGGAGCAGGCCCCGGCGGGGCCAGTTCCACACCCAGCACGTCGTCGGCTTCAAGGCGCAGGGCCCGCACCTGCAGAGGCGTCCAGCTCATGCGCGTACCCCCGCGGCCTGTTGCAGGCGAAGTACAGCCTGGC‑GTGCCTGGCTGCCCAGTTCGGCGAGGTCCAAGCCAGGAATCGCATCGTTTTCCACGCTCAGGCGGCCGCCTACCAGCAATGCCCGCAGCGTCGGACGGCCACCGCCAACCACTGGGGCGATGCCCAGATCATGCAGACCGAAGTAGCGGGG > NC_002947/3641679‑3641971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |