| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 425,349 | A→T | 6.8% | intergenic (‑40/+17) | PP_0349 ← / ← PP_0350 | membrane protein/ferrichrome‑iron receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 425,349 | 0 | A | T | 6.8% | 214.9 / 5.3 | 74 | intergenic (‑40/+17) | PP_0349/PP_0350 | membrane protein/ferrichrome‑iron receptor |
| Reads supporting (aligned to +/- strand): ref base A (36/33); new base T (2/3); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.35e-01 | |||||||||||
AGATAAGGGGCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGCGACCGACGCGCCCTCCA > NC_002947/425204‑425496 | aGATAAGGGGCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAggc < 4:295749/149‑1 (MQ=255)aGATAAGGGGCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAggc < 2:388244/149‑1 (MQ=255) gATAAGGGGCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAggcg < 7:159712/149‑1 (MQ=255) tAAGGGGCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAgg < 1:208685/145‑1 (MQ=255) tAAGGGGCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAgg > 2:208685/1‑145 (MQ=255) ggggCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCCTTGCGGcccc < 3:170150/149‑1 (MQ=255) gggCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCCTTGCGGccccg < 1:72106/149‑2 (MQ=255) gCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGGCAGGCGGCCCCAGc > 2:391338/1‑149 (MQ=255) ggCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGctca < 5:347516/149‑1 (MQ=255) ccGGTGACTGCCAGCAACAGCATTTAGAGGGTACAGACCAGGCTGCTCCAGGTGTGGTGCAAGGACCAGCGGTGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCTAGGCGGccc < 8:154554/140‑1 (MQ=255) ccGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GAGTGTTGTAGGTTGTAACCCGGGGCCGCCAGGGGGCCGCacatccgc > 7:154554/1‑142 (MQ=255) ggTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGTAAGGCGGCCCCAGctcact > 8:216506/1‑147 (MQ=255) tGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCCGCTCACTCAGAAcgt > 4:52872/1‑147 (MQ=255) ccAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGGGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACtt < 7:183325/147‑1 (MQ=255) aGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGTGGCCCCAGCTCACTCAGAACTTGt > 4:252432/1‑147 (MQ=255) agGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTg < 2:396536/149‑1 (MQ=255) agGAACAGGGTACAGACCAGGCTGCTCCAGGTGTAGATCACGGACCACCGGCTAAAATTATAAAAATTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGGAAGTGGCGCTg > 4:392299/1‑149 (MQ=255) ggTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAAc > 1:83989/1‑149 (MQ=255) tACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGGCCCAGCTCACTCAGAACTTGTAAGTGGGGCTGGCGACAACGc > 3:401627/1‑149 (MQ=255) cAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCt < 3:244248/148‑1 (MQ=255) aCCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCCGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTgcgc > 8:122895/1‑149 (MQ=255) ccAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTgcgc > 6:337407/1‑148 (MQ=255) tCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCCAGGCGGCCCCCGCGGACGCAGAACGTGTTAGTGGCGCGGGCGACAACGCTGCGCTCAGCGCCgg > 4:22455/1‑148 (MQ=255) tCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATAACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCg > 5:333986/1‑148 (MQ=255) cAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGTGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCgt < 3:252432/147‑1 (MQ=255) ggTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCgta < 7:261291/146‑1 (MQ=255) gATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGTAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCagta < 7:216506/149‑1 (MQ=255) tCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTgcgc > 4:154523/1‑127 (MQ=255) tCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTgcgc < 3:154523/127‑1 (MQ=255) tCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCagtag > 4:41306/1‑148 (MQ=255) tCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCagtag > 1:335590/1‑148 (MQ=255) tCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACACAGAACATGTAAGTTGCGCTGGCGAAAACGCTGCGCACATCGCCGTAGTAGCagtat > 6:271952/1‑147 (MQ=255) cAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCagtag > 1:331227/1‑147 (MQ=255) agggACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGtagtag < 3:83222/147‑1 (MQ=255) aaGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAgtagta < 2:83989/148‑1 (MQ=255) aaGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGtagtag < 5:337407/149‑1 (MQ=255) aCCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGa < 3:35304/147‑1 (MQ=255) aCCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGa > 4:35304/1‑147 (MQ=255) aGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTcac < 8:285871/149‑1 (MQ=255) gcggcgGATGGTGGGGCTCTTCATCACGGTACCAGATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTca > 1:262864/1‑148 (MQ=255) ggcggATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAg < 1:213678/149‑1 (MQ=255) aTGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTagag < 3:41306/149‑1 (MQ=255) tggtggGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTTAGTGGCGCTGGCGACAACGCTGCGGTCATCGCCGTAGTAGCAGTAGGAGGAGGAACAATTagagc > 4:235131/1‑148 (MQ=255) gtggGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTagagag < 5:271952/148‑1 (MQ=255) tggGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAgg < 1:62127/131‑1 (MQ=255) tggGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAgg > 2:62127/1‑131 (MQ=255) gggCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTaa > 5:117554/1‑149 (MQ=255) gCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCagta < 7:331248/122‑1 (MQ=255) ctctTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATcc < 6:117554/149‑1 (MQ=255) catcaCGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGt < 6:333986/148‑1 (MQ=255) atcaCGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACtt > 8:210665/1‑67 (MQ=255) atcaCGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACtt < 7:210665/67‑1 (MQ=255) aCGGTACC‑GATTGTTGTCGGTTGGAACCGGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTcag > 1:230332/1‑148 (MQ=255) ggTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCACAACTTGTAAGTGGCCCAGGCGACAACGCTGAGCTCATCGCCGGAGTAGCAGAAGTAGGAGTCACAACTAGAGAGGTAATACATGTTcagcag > 2:110849/1‑149 (MQ=255) tACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTagaga > 5:159406/1‑128 (MQ=255) tACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTagaga < 6:159406/128‑1 (MQ=255) c‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCagtag > 4:74216/1‑106 (MQ=255) c‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCagtag < 3:74216/106‑1 (MQ=255) gtttgttgTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTtggt < 1:110849/147‑1 (MQ=255) gATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTtggt < 6:117061/149‑1 (MQ=255) gtCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTaa < 5:222270/53‑1 (MQ=255) gAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGCTAATCCTTGTTCAGCAGGTTGGTGGCGGGGACCGcga < 3:392299/148‑1 (MQ=255) aCCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGcgacc > 8:141121/1‑148 (MQ=255) gctggggCCGCCTTGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGcgaccga > 5:225848/4‑149 (MQ=255) cccGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGcgaccga > 1:376251/1‑149 (MQ=255) ctggggCCGCCTTGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGcgaccgac > 7:241022/3‑149 (MQ=255) ccGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGcgaccgac > 4:28424/1‑149 (MQ=255) gggCCGCCTTGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGCGACCGAcgcg < 8:241022/149‑1 (MQ=255) cGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGGAGCAGTAGGAGGAGTCACAAGGAGCGAGGGACTCCGTGTTCCGCCGGGTGGTGGCGGTGCCCGCGACCGACGCGCCCt > 5:125202/1‑149 (MQ=255) gCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTagag < 6:311531/96‑1 (MQ=255) gCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGCGACCGACGCGCCCTc > 4:213402/1‑149 (MQ=255) gCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGCGACCGACGCGCCCTc > 7:206930/1‑149 (MQ=255) gCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGCGACCGACGCGCCCTc > 2:284733/1‑149 (MQ=255) gCAAGGCGGCCCCAGCTCAATCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGCGACCGACGCGCCCTc > 2:240199/1‑149 (MQ=255) aaGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGCGACCGACGCGCCCTCCa < 3:22455/149‑1 (MQ=255) | AGATAAGGGGCAGGCCGGTGACTGCCAGCAACAGCAGGAACAGGGTACAGACCAGGCTGCTCCAGGTGTGGATCAAGGACCAGCGGCGGATGGTGGGGCTCTTCATCACGGTACC‑GATTGTTGTCGGTTGGAACCCGGGGCCGCAAGGCGGCCCCAGCTCACTCAGAACTTGTAAGTGGCGCTGGCGACAACGCTGCGCTCATCGCCGTAGTAGCAGTAGTAGGAGTCACAAGTAGAGAGGTAATCCTTGTTCAGCAGGTTGGTGGCGGTGACCGCGACCGACGCGCCCTCCA > NC_002947/425204‑425496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |