| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,779,129 | A→T | 9.1% | S112T (TCT→ACT) | nikR ← | nickel‑responsive regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,779,129 | 0 | A | T | 9.1% | 211.2 / 9.4 | 77 | S112T (TCT→ACT) | nikR | nickel‑responsive regulator |
| Reads supporting (aligned to +/- strand): ref base A (35/35); new base T (3/4); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.10e-01 | |||||||||||
CTGACGTTGGACTTCTGAGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAGCCGTCTGGGCAGTTCGCGGGTGCT > NC_002947/3778981‑3779276 | cTGACGTTGGACTTCTGAGTAACGGCCCTTGGGCCGATCGCGTAACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCgaga < 2:193138/149‑1 (MQ=255) aCGTTGGACTTCTGAGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGAc < 1:215303/147‑1 (MQ=255) gTTGGACTTCTGAGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACt > 5:170330/1‑149 (MQ=255) ttGGACTTCTGAGTAACGGCCCTTGGGCCGATCGCTTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTc > 8:350580/1‑149 (MQ=255) cTTCTGAGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGTTGTCTCGCCaa < 2:67321/149‑1 (MQ=255) ttCTGAGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGACAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGTTGTCTCGCCaa > 5:146944/1‑148 (MQ=255) cTGAGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTc > 5:4206/1‑149 (MQ=255) cTGAGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGACAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGTTGTCTCGCCaa < 6:146944/146‑1 (MQ=255) gAGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCgg > 1:231230/1‑149 (MQ=255) aGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGTTGTCTCGCCAAttgat < 8:53747/148‑4 (MQ=255) gTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGcc < 3:38884/149‑1 (MQ=255) tAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCg < 6:390947/149‑1 (MQ=255) ggCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCttt > 7:217495/1‑149 (MQ=255) ccTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGc > 8:329143/1‑149 (MQ=255) cTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGcc < 3:371668/149‑1 (MQ=255) cTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCCGCCGCTTTCGcc > 4:74452/1‑149 (MQ=255) gggCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCt < 6:170330/148‑1 (MQ=255) gggCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCt < 8:217495/148‑1 (MQ=255) tCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCAcc < 2:231230/149‑1 (MQ=255) gcgTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGTGCCTGTATCACCTGCAGCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCga < 3:261932/149‑1 (MQ=255) cGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTc > 1:50266/1‑149 (MQ=255) gAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTcc < 1:72202/149‑1 (MQ=255) aaCAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTc > 6:226364/1‑147 (MQ=255) aaGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGc < 6:128692/149‑1 (MQ=255) gTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCGAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCCGGCAg > 7:361426/1‑149 (MQ=255) ggCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGACGCGCTCAAACATCAATTGGCGAGACAACTCGCCAATTCGGCAGCTTTCGCCCTGAAGCACCGAGACCTCCAGGCAGTGGc > 5:415521/1‑149 (MQ=255) gCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCTTCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCCCCGAGACCTCCAGGCAGTGGcc > 5:229203/1‑149 (MQ=255) gCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTgg > 5:338499/1‑147 (MQ=255) gCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGcc > 3:17950/1‑149 (MQ=255) cAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCg < 7:329143/149‑1 (MQ=255) aCGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCgg > 8:327228/1‑148 (MQ=255) ccTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATc > 7:27281/1‑149 (MQ=255) aGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAgg < 7:350580/149‑1 (MQ=255) gcgcACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGt < 6:4206/149‑1 (MQ=255) gcACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGc < 2:50266/149‑1 (MQ=255) gcACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACATCCAGGCAGTGGCCGGCATCCAGGTg > 8:305220/1‑148 (MQ=255) aCCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGca > 1:384532/1‑148 (MQ=255) cTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCCCCGAGACCTCCAGGCAGTGGCCCGCATCCAGGTGCACAt > 4:192997/1‑149 (MQ=255) cTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACAt > 6:400848/1‑149 (MQ=255) cTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACAt > 7:332885/1‑149 (MQ=255) gCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGGTGAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCGGCAGCACCGAGCCCGCCAGGCAGTGGCCGGCGTCCAGGTGCACATGCAgg > 8:118068/1‑149 (MQ=255) gCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAAACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAgg > 2:194016/1‑149 (MQ=255) ccccGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGt < 6:338499/147‑1 (MQ=255) ccccGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTg < 4:362571/148‑1 (MQ=255) cccGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGa < 6:229203/149‑1 (MQ=255) gAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCgg < 4:17950/149‑1 (MQ=255) gggATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAg < 5:86606/104‑1 (MQ=255) gggATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAg < 1:57378/104‑1 (MQ=255) gggATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAg > 2:57378/1‑104 (MQ=255) gggATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAg > 6:86606/1‑104 (MQ=255) gggATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGcc > 5:166766/1‑113 (MQ=255) gggATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGcc < 6:166766/113‑1 (MQ=255) gATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGAt < 3:95399/149‑1 (MQ=255) aTCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATc < 5:226364/149‑1 (MQ=255) cctgcacctgGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCgag < 6:139059/89‑1 (MQ=255) cctgcacctgGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCgag > 5:139059/1‑89 (MQ=255) cacctgGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAAACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGtggtgg < 1:194016/148‑1 (MQ=255) ctgGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGt > 4:357371/1‑149 (MQ=255) gCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCa < 3:357371/149‑1 (MQ=255) ccACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTgg > 3:4893/1‑149 (MQ=255) ccACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTgg > 6:29703/1‑149 (MQ=255) ccACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTg < 3:192997/148‑1 (MQ=255) ccACGCCGCGCCCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGt < 7:96674/145‑1 (MQ=255) ccACGCCGCGCCCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGt > 8:96674/1‑145 (MQ=255) cACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTgg < 7:327228/148‑1 (MQ=255) gcgcTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTg > 1:47291/1‑141 (MQ=255) gcgcTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTg < 2:47291/141‑1 (MQ=255) gcTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAg > 7:197671/1‑145 (MQ=255) gcTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAg < 8:197671/145‑1 (MQ=255) gcTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAGCCGt > 3:101922/1‑149 (MQ=255) aaCCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAGCCGTCTg < 8:27281/148‑1 (MQ=255) ggccgaaTTGGCGAGTTGTCTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAgg > 2:63594/6‑128 (MQ=255) ggccgaaTTGGCGAGTTGTCTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAgg < 1:63594/123‑1 (MQ=255) ccgaaTTGGCGAGTTGTCTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGGGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAGCCGTCTGGGCAg > 3:260101/4‑149 (MQ=255) aTCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAGCCGTCTGGGCAg < 8:332885/149‑1 (MQ=255) tCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGtggtgg > 8:63731/1‑116 (MQ=255) tCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGtggtgg < 7:63731/116‑1 (MQ=255) tCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAGCCGTCTGGGCAGt < 5:29703/149‑1 (MQ=255) gagaCAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAGCCGTCTGGGCAGTTCGCGGGTg > 7:72443/1‑149 (MQ=255) agaCAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAGCCGTCTGGGCAGTTCGCGGGTGc < 5:400848/149‑1 (MQ=255) taCAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGAACTCCAGGCAGTGGCCGGCATCCAGGTGCAAATGCAGGTTGGATCGGGTCAGATCGTGGTGTGCGTGCAGGGTCTTGTTTAGCCGTCTGGGCAGTTCGCGGGTGCt < 6:415521/148‑1 (MQ=255) | CTGACGTTGGACTTCTGAGTAACGGCCCTTGGGCCGATCGCGTCACGAACAAGTGAGGCAACGCCTCAGCGCACCTTCGGCTGCCCCGGAGCCGGGATCACCTGCACCTGGCCATGTTCCACGCCGCGCTCAACCATCAATTGGCGAGACAACTCGCCAATTCGGCCGCTTTCGCCCTGCAGCACCGAGACCTCCAGGCAGTGGCCGGCATCCAGGTGCACATGCAGGGTGGATCGGGTCAGATCGTGGTGGGCGTGCAGGGTCTGGTTGAGCCGTCTGGGCAGTTCGCGGGTGCT > NC_002947/3778981‑3779276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |