Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,996,897 | G→T | 6.4% | P89H (CCT→CAT) | PP_3525 ← | hypothetical protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,996,897 | 0 | G | T | 6.4% | 230.6 / 3.5 | 71 | P89H (CCT→CAT) | PP_3525 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base G (38/28); new base T (2/3); total (40/31) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.47e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CAGCACGCCCTGCTGCAGTTGCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGCGTGTCGGCACCAAGGCTGTAGG > NC_002947/3996752‑3997044 | cAGCACGCCCTGCTGCAGTTGCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCa > 3:339618/1‑149 (MQ=255) cACGCCCTGCTGCAGTTGCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAg < 4:2089/143‑1 (MQ=255) cACGCCCTGCTGCAGTTGCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGAATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAg > 3:2089/1‑143 (MQ=255) cGCCCTGCTGCAGTTGCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATgcgc > 6:351275/1‑149 (MQ=255) gCCCTGCTGCAGTTGCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCt < 5:351275/149‑1 (MQ=255) ccTGCTGCAGTTGCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTg > 3:382272/1‑148 (MQ=255) ttGCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAGCAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCa > 5:356460/1‑149 (MQ=255) gCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCt > 2:110968/1‑135 (MQ=255) gCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCt < 1:110968/135‑1 (MQ=255) aaCCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGaa > 2:90309/1‑149 (MQ=255) aCTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACa < 3:226305/149‑1 (MQ=255) gCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAgcg > 2:131744/1‑149 (MQ=255) tGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGcgcg > 2:238804/1‑149 (MQ=255) tGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGcgcg > 1:260068/1‑149 (MQ=255) gCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGt < 2:260068/148‑1 (MQ=255) cctcctGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCt > 7:266260/1‑149 (MQ=255) cctcctGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCt > 6:228778/1‑149 (MQ=255) tcctGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTc > 7:118443/1‑149 (MQ=255) ctGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTcc < 6:356460/148‑1 (MQ=255) tGCCCGGGGTACCGTCTGGCCACTCGCCCATCACGGTCGAGCAGCAAACGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAg > 6:8626/1‑149 (MQ=255) cccGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAgg > 4:32158/1‑148 (MQ=255) cccGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAg < 4:339618/147‑1 (MQ=255) ccGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAgg > 6:418686/1‑147 (MQ=255) cGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTg > 5:192559/1‑109 (MQ=255) cGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTg < 6:192559/109‑1 (MQ=255) cGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAg < 5:418686/149‑1 (MQ=255) ccGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTgg < 3:32158/149‑1 (MQ=255) gCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCtt > 2:72960/1‑144 (MQ=255) gCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCtt < 1:72960/144‑1 (MQ=255) gCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGgct < 8:118443/149‑1 (MQ=255) gCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCtt > 2:316193/1‑140 (MQ=255) gCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCtt < 1:316193/140‑1 (MQ=255) cACTCGCCCATCACGGTCGAGCAGCACCGGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCgg > 1:232888/1‑149 (MQ=255) cACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTcc > 3:106630/1‑127 (MQ=255) cACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTcc < 4:106630/127‑1 (MQ=255) cACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCgg > 2:71719/1‑149 (MQ=255) tCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGc > 5:344586/1‑147 (MQ=255) ccATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATa < 4:107758/103‑1 (MQ=255) ccATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATa > 3:107758/1‑103 (MQ=255) ccATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTgc > 7:255534/1‑149 (MQ=255) cATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTgcc < 8:266260/149‑1 (MQ=255) aCGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTgccgcc < 4:382272/148‑1 (MQ=255) cGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGTGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCtt < 1:90309/149‑1 (MQ=255) tCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTTCTCGGCCAGTGCCGCCTTGAc < 5:228778/149‑1 (MQ=255) gcaCCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTg < 2:253711/149‑1 (MQ=255) caCCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTgg > 8:262987/1‑149 (MQ=255) cGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCtt < 8:147339/97‑1 (MQ=255) cGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCtt > 7:147339/1‑97 (MQ=255) gTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTggg > 5:96824/1‑111 (MQ=255) gTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTggg < 6:96824/111‑1 (MQ=255) aaTCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATcg > 3:103993/1‑149 (MQ=255) aTCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATcgc > 2:333582/1‑149 (MQ=255) gcgcATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATcgcgcg > 6:318015/1‑149 (MQ=255) gcATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGa > 8:322320/1‑120 (MQ=255) gcATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGa < 7:322320/120‑1 (MQ=255) aTGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGccac < 6:344586/149‑1 (MQ=255) aTGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGccac > 5:122979/1‑149 (MQ=255) ggCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGccac > 6:109430/1‑147 (MQ=255) cctcgAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCTCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATc < 4:103993/146‑1 (MQ=255) gcgAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGccac < 4:199274/137‑1 (MQ=255) gcgAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGccac > 3:199274/1‑137 (MQ=255) cgAACAGTTTGCTGATCAGCGCATGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGc < 8:255534/149‑1 (MQ=255) gAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGa > 6:420521/1‑104 (MQ=255) gAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGa < 5:420521/104‑1 (MQ=255) gAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGCg > 2:124251/1‑149 (MQ=255) cAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGCgtgt < 1:71719/149‑1 (MQ=255) gCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGCGTGTCGGCAc > 8:331133/1‑149 (MQ=255) cattCAGCGCATGCCTGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTg < 6:240657/98‑1 (MQ=255) cattCAGCGCATGCCTGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTg > 5:240657/4‑101 (MQ=255) attCAGCGCATGCCTGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGCGTGTCGGCAcc > 8:52352/3‑147 (MQ=255) aGCGCATGCCTGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGCGTGTCGGCACCAAGGCt < 7:52352/149‑1 (MQ=255) cgcAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGCGTGTCGGCACCAAGGCTGt < 5:109430/149‑1 (MQ=255) aGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGCGTGTCGGCACCAAGGCTGTAgg > 2:2122/1‑149 (MQ=255) | CAGCACGCCCTGCTGCAGTTGCAACCACTGCACCTGGCCCTCCTGCCCGGGGTACCGGCTGGCCACTCGCCCATCACGGTCGAGCAGCACCCGGTAGCTGTAATCGCGCATGGCCGGGACCGCGAACAGTTTGCTGATCAGCGCAGGCATGCGCTGAATGTCGGCCACGAATACAGCGGCGCGTGCTTCCAGGTAGCCCTTGGGCTGCTCGGCCAGTGCCGCCTTGACCAGCTTGGCACCGTCCATATCGCGCGCCACCAGTAAAATCTGCGTGTCGGCACCAAGGCTGTAGG > NC_002947/3996752‑3997044 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |