| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,051,898 | C→T | 7.8% | R186H (CGT→CAT) | PP_3571 ← | acetylornithine deacetylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,051,898 | 0 | C | T | 7.8% | 263.1 / 8.5 | 89 | R186H (CGT→CAT) | PP_3571 | acetylornithine deacetylase |
| Reads supporting (aligned to +/- strand): ref base C (37/45); new base T (3/4); total (40/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
CGAAGCGCTCGTCGTGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAACCGACTTCTTCGTCATAG > NC_002947/4051755‑4052041 | cGAAGCGCTCGTCGTGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCAtt > 3:126019/1‑149 (MQ=255)cGAAGCGCTCGTCGTGATGAACCGGCAGTGCCAGGGCCTCGCCGAATTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCAtt > 1:288545/1‑149 (MQ=255) gAAGCGCTCTTCGTGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTTCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCTCCCTGCACCTGGCAACGCATTg < 5:126850/149‑1 (MQ=255) gAAGCGCTCGTCGTGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCAtt < 5:7378/148‑1 (MQ=255) cTCGTCGTGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCt > 4:261083/1‑149 (MQ=255) tcgtcgTGATGTACCGGCAGTGCAAGGGCGTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCGCATACGGCGCGTACGCCGAATGGCACTCTGCGCCCTGCACCTGGCAACGCATTGCCAGCtt < 2:369110/149‑1 (MQ=255) gtcgtGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCtt < 3:30422/147‑1 (MQ=255) gtcgtGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCtt < 3:147076/147‑1 (MQ=255) gtcgtGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGc > 8:138429/1‑149 (MQ=255) gtGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGccc < 3:253656/148‑1 (MQ=255) tgatgaACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCtt < 3:316810/149‑1 (MQ=255) atgaACCGGCAGTGCCAGGGCCTCGCGGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTtgt > 3:279200/1‑149 (MQ=255) atgaACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTtg < 2:370143/148‑1 (MQ=255) tgaACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTtgt < 2:205230/148‑1 (MQ=255) aaCCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACg < 4:106031/126‑1 (MQ=255) aaCCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACg > 3:106031/1‑126 (MQ=255) aCCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGccc < 7:138429/149‑1 (MQ=255) ccGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGccc > 2:73771/1‑148 (MQ=255) ggCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAg < 4:126019/149‑1 (MQ=255) ggCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAg > 3:51357/1‑149 (MQ=255) ggCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGa < 4:143738/149‑1 (MQ=255) ggCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCAAGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGa < 2:33088/149‑1 (MQ=255) ccTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGt < 2:382760/149‑1 (MQ=255) gCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTc < 3:261083/147‑1 (MQ=255) aCCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCAc < 4:325331/149‑1 (MQ=255) aCCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCAc > 7:137684/1‑149 (MQ=255) aCCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCAc > 1:99368/1‑149 (MQ=255) aCCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCAc > 2:46520/1‑149 (MQ=255) cAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGa < 2:288545/149‑1 (MQ=255) cTTGCCAATAAGTTTAGCAGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCa < 8:137684/149‑1 (MQ=255) ttGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAg > 4:373516/1‑149 (MQ=255) gCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTAcc < 3:216029/118‑1 (MQ=255) gCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTAcc > 4:216029/1‑118 (MQ=255) ccAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGca > 4:46949/1‑149 (MQ=255) cAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGca > 5:99125/1‑148 (MQ=255) aTCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAg > 3:100812/1‑149 (MQ=255) aTCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAg > 6:43544/1‑149 (MQ=255) aTCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAg > 6:49487/1‑149 (MQ=255) tCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCAc > 5:311793/1‑135 (MQ=255) tCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCAc < 6:311793/135‑1 (MQ=255) tttCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTg > 2:342777/1‑149 (MQ=255) tttCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTg < 3:373516/149‑1 (MQ=255) gccgcATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGtt > 3:20868/1‑148 (MQ=255) ccgcATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGATTGAGTTCGGAGGGTTCACCGATCAGCCACAGCCGTGGTTTa > 6:262350/1‑149 (MQ=255) tACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAATGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACCCgg < 2:285599/149‑1 (MQ=255) tACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACgg < 3:46949/149‑1 (MQ=255) tACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACgg < 7:391043/149‑1 (MQ=255) tCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGgcg > 8:119190/1‑149 (MQ=255) gATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCGGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGgcgc < 1:342777/148‑1 (MQ=255) gCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTg < 4:100812/149‑1 (MQ=255) ttCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAg < 7:143631/149‑1 (MQ=255) ttCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAg < 5:262350/149‑1 (MQ=255) ttCACACCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCTCAGCCGTGGTTTACACGGGCGCTGTTGGAg < 4:279200/149‑1 (MQ=255) cccATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTggg < 3:187365/99‑1 (MQ=255) cccATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTggg > 4:187365/1‑99 (MQ=255) cccATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGt < 2:386927/121‑1 (MQ=255) cccATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGcag > 8:49368/1‑149 (MQ=255) aTACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGTCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGcagcca < 5:43544/149‑1 (MQ=255) aTACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGcagcca < 5:49487/149‑1 (MQ=255) ggCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCAt > 8:309750/1‑149 (MQ=255) cgTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAg < 1:46520/149‑1 (MQ=255) cgTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAg < 6:392163/149‑1 (MQ=255) cgTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAg < 6:99125/149‑1 (MQ=255) gCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCAc > 6:230975/1‑149 (MQ=255) cGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCAc > 5:313717/1‑86 (MQ=255) cGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCAc < 6:313717/86‑1 (MQ=255) gCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAAcc < 3:68144/149‑1 (MQ=255) cTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAAcc > 8:375136/1‑148 (MQ=255) tGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAACCGa > 4:131229/1‑149 (MQ=255) gcCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAggg > 2:211293/1‑113 (MQ=255) gcCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAggg < 1:211293/113‑1 (MQ=255) gcCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGca > 3:345919/1‑115 (MQ=255) gcCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGca < 4:345919/115‑1 (MQ=255) cccTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAgg < 6:264425/111‑1 (MQ=255) cccTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAgg > 5:264425/1‑111 (MQ=255) ccTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATc > 5:227098/1‑122 (MQ=255) ccTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATc < 6:227098/122‑1 (MQ=255) gCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAACCGACTTCTTCg > 7:143075/1‑149 (MQ=255) aagcTGGCAATGCGTTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGa < 6:60915/117‑1 (MQ=255) aagcTGGCAATGCGTTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGa < 6:67109/117‑1 (MQ=255) aagcTGGCAATGCGTTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGa > 5:67109/4‑120 (MQ=255) aagcTGGCAATGCGTTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGa > 5:60915/4‑120 (MQ=255) agcTGGCAATGCGTTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAACCGa > 5:161519/3‑139 (MQ=255) agcTGGCAATGCGTTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAACCGa < 6:161519/137‑1 (MQ=255) aCCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAg < 5:190456/120‑1 (MQ=255) aCCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAg > 6:190456/1‑120 (MQ=255) cTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAACCGACTTCTTCGTCa > 3:73228/1‑148 (MQ=255) gCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAACCGACTTCTTCGTCATAg < 4:73228/148‑1 (MQ=255) gCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAACCGACTTCTTCGTCATAg < 7:375136/148‑1 (MQ=255) | CGAAGCGCTCGTCGTGATGAACCGGCAGTGCCAGGGCCTCGCCGATTTCACCCAACTTGCCAATCAGTTTCGCCGCATACTCGATGGCGTTCACCCCATACGGCGCGTACGCCGAATGGCACGCTGCGCCCTGCACCTGGCAACGCATTGCCAGCTTGCCCTTGTGCCCCAGTACCGGTTTGAGTTCGGTGGGTTCACCGATCAGGCACAGCCGTGGTTTACACGGGCGCTGTTGGAGGGCAGCCAGCATCGAGCGCACGCCCAAACAACCGACTTCTTCGTCATAG > NC_002947/4051755‑4052041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |