| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,180,948 | A→G | 5.8% | K271K (AAA→AAG) | PP_3678 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,180,948 | 0 | A | G | 5.8% | 205.2 / 2.3 | 69 | K271K (AAA→AAG) | PP_3678 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (34/31); new base G (2/2); total (36/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01 | |||||||||||
CAAGCACAACCCAGATCTATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATCCTATATAGATTTTTTGCACTCGCGGGGTATTAAAT > NC_002947/4180801‑4181096 | cAAGCACAACCCAGATCAATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑aaaaaa < 3:70081/149‑1 (MQ=255) aGCACAACCCAGATCTATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑aaaaaaaa < 4:221933/149‑1 (MQ=255) gCACAACCCAGATCTATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑aaaaaa > 6:208219/1‑146 (MQ=255) aCCCAGATCTATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAAtt < 5:208219/149‑1 (MQ=255) cccAGATCTATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACATCCATGTATTAG‑AAAAAAAAGAAATTc > 5:373765/1‑149 (MQ=255) cAGATCTATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATTAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCtt < 3:274905/149‑1 (MQ=255) cTATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTAcc > 2:76649/1‑149 (MQ=255) cTATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTAcc > 3:214962/1‑149 (MQ=255) tataTGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGAAGATGAAACTAATGGGCATGCGACAAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTAcc > 5:289829/1‑148 (MQ=255) atatGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCt > 4:261482/1‑148 (MQ=255) tatGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTa > 5:172392/1‑148 (MQ=255) tGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACaa < 8:282476/149‑1 (MQ=255) tGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACaa < 2:219342/149‑1 (MQ=255) tCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAGAAAAAAAAAGAAATTCTTGTACCTACaa > 6:57838/1‑148 (MQ=255) gCCACAAATCTTTATATTTATGAAAGACGCATTTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAGAAAAAAAAAGAAATTCTTGTACCTACaaaa < 5:57838/148‑1 (MQ=255) ccACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCtt > 5:282875/1‑134 (MQ=255) ccACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCtt < 6:282875/134‑1 (MQ=255) cacaAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AGAAGAAAGAAATTCTTGt > 5:5883/1‑135 (MQ=255) cacaAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AGAAGAAAGAAATTCTTGt < 6:11728/135‑1 (MQ=255) cacaAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AGAAGAAAGAAATTCTTGt < 6:5883/135‑1 (MQ=255) cacaAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AGAAGAAAGAAATTCTTGt > 5:11728/1‑135 (MQ=255) cacaAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAATAAATTCTTGTACCTACAAAAAAAc > 7:273295/1‑149 (MQ=255) acaAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACg > 6:285987/1‑149 (MQ=255) caAATCTTTATATTTATGAAATACGCATGTTTATCATCATTATGATGAAACTCATGGGCATGCGACCATATGAACTATACGACCTTGACTTAAATGCCAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACgg < 1:313414/149‑1 (MQ=255) caAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACgg < 4:214962/149‑1 (MQ=255) aaaTCTTTATATTTATGCAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACggg < 6:410828/149‑1 (MQ=255) aaaTATTTATATTTATGTAAGACGCATGTTTATCATCAGGTTGATGAAACTCATGGGCATGCGACCAGAGTAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAATCggg < 6:373765/149‑1 (MQ=255) aaTCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACgggg < 8:252583/149‑1 (MQ=255) cTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGTGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGaa > 7:133017/1‑148 (MQ=255) tatTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCt < 1:76649/148‑1 (MQ=255) tATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCAc < 3:24514/148‑1 (MQ=255) gAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCtt < 5:115841/114‑1 (MQ=255) gAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCtt > 6:115841/1‑114 (MQ=255) cGCATGTTTATCATGAGTATTATGAAACTCATGGGCATGCGACCATAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCa < 8:273295/149‑1 (MQ=255) tcATGTTTATCATCAGGATGATGAAACTCATGGTCAAGCGACCAGAGGAACTATACGCCGATGACTAAAAGGAGAACCTCCATGTATTAG‑AAAAAATAGATATTCTTGTACGTACTATAAAACTGGGAATACCTGCACCCATACGCCaa > 6:426118/2‑148 (MQ=255) gCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCAc > 5:274367/1‑149 (MQ=255) gCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTAACTAAAAAAAAACGGGGAATACCTTCACCCATACGCCa > 6:404848/1‑148 (MQ=255) aTGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTAcc < 2:231783/110‑1 (MQ=255) aTGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTAcc > 1:231783/1‑110 (MQ=255) aTGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACtt < 3:261482/149‑1 (MQ=255) gTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACggg > 6:394999/1‑122 (MQ=255) gTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACggg < 5:394999/122‑1 (MQ=255) gTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTc > 5:102359/1‑148 (MQ=255) tATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCaaa < 6:274367/148‑1 (MQ=255) tgaAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAg > 5:21992/1‑135 (MQ=255) tgaAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAg < 6:21992/135‑1 (MQ=255) aaCTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCa > 6:208236/1‑149 (MQ=255) tCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGc > 4:102898/1‑149 (MQ=255) gCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCTACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTc < 5:285987/149‑1 (MQ=255) aTGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGa > 2:230038/1‑149 (MQ=255) gACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGcc > 2:195760/1‑149 (MQ=255) ccAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATCCCCCCTCAGCACGCCAGTTCGATGCCTa < 1:230038/149‑1 (MQ=255) cAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGcccc < 2:346608/124‑1 (MQ=255) gagGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTAtt > 6:193680/1‑148 (MQ=255) aaCTATACGACCTTGACTTAAAGTACAACCTCCATTTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGa < 5:404848/148‑1 (MQ=255) aCTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACg > 4:211350/1‑149 (MQ=255) cTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAATGTCAATGCCCCCTCAGCATGCGAGTTCGATGGCTATTTAGACGc > 6:142620/1‑149 (MQ=255) tataCGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCt < 5:208236/149‑1 (MQ=255) taCGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGc > 7:128692/1‑146 (MQ=255) cGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCa < 7:273075/115‑1 (MQ=255) cGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCa > 8:273075/1‑115 (MQ=255) cTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATc > 5:290132/1‑149 (MQ=255) gACTTAAAGGACAACCTCCATTTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATcc < 6:290132/147‑1 (MQ=255) gACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATCCt < 3:102898/148‑1 (MQ=255) cTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAGATTCTTGTACCt < 3:38462/49‑1 (MQ=255) cTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCt > 4:38462/1‑49 (MQ=255) aaCCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCCATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATCCTATATAGAtttttt < 6:102359/149‑1 (MQ=255) ccTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATCCTATATAGATTTTTTg > 4:70560/1‑148 (MQ=255) cTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGAt < 4:67541/108‑1 (MQ=255) cTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGAt > 3:67541/1‑108 (MQ=255) aTGTATTAG‑AAAAAAAAGAAATTCTAGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTAAATGCCCCCTCAGCACGCAAATTCGATGCCTATATAGACGCTAGAAAATCATATATAGATTATATGCaatag > 6:212009/1‑145 (MQ=255) g‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATCCTATATAGATTTTTTGCACTCGCGGGGTAt > 4:92792/1‑149 (MQ=255) aaaaaaGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCt > 5:19094/1‑108 (MQ=255) aaaaaaGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCt < 6:19094/108‑1 (MQ=255) aaaaaaGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATCCTATATAGATTTTTTGCACTCGCGGGGTATTa > 5:367434/1‑148 (MQ=255) aaaaGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATCCTATATAGATTTTTTGCACTCGCGGGGTATTAAAt < 8:128692/149‑1 (MQ=255) | CAAGCACAACCCAGATCTATATGTCGCCACAAATCTTTATATTTATGAAAGACGCATGTTTATCATCAGGATGATGAAACTCATGGGCATGCGACCAGAGGAACTATACGACCTTGACTTAAAGGACAACCTCCATGTATTAG‑AAAAAAAAGAAATTCTTGTACCTACAAAAAAACGGGGAATACCTGCACCCATACGCCACTTCAAAGTCAATGCCCCCTCAGCACGCCAGTTCGATGCCTATTTAGACGCTAGAAAATCCTATATAGATTTTTTGCACTCGCGGGGTATTAAAT > NC_002947/4180801‑4181096 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |