New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2301453 =	0 (0.000)	40 (1.130)	29/282	0.3	100%	intergenic (‑97/‑234)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2925429 =	NA (NA)					intergenic (‑177/+388)	PP_2563/PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase

ATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2301601‑2301453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAATG  >  NC_002947/2925429‑2925574                                                                                                                                                                                                                                                                                                         ATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGA                                                                                                                                                     <  3:159972/148‑1      AGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACCCCGGCGCAGCCGGTGCCATGCCCCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCA                                                                                                                                                >  5:53182/1‑148       GGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCAC                                                                                                                                               >  6:104737/1‑148                 GTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTC                                                                                                                                     <  3:97263/148‑1                    CATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGG                                                                                                                                  >  4:84415/1‑148                            AGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGCGCTGCGCT                                                                                                                          >  2:135975/1‑148                               GGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTC                                                                                                                       >  2:181878/1‑148                               GGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTC                                                                                                                       <  7:22841/148‑1                                     GCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATTAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACA                                                                                                                  >  4:143386/1‑147                                     GCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCGTCCGGGCTGCGCTGTCGCACA                                                                                                                  >  5:108933/1‑147                                       CCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCA                                                                                                               >  7:49735/1‑148                                        CGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAA                                                                                                              >  7:116583/1‑148                                               ACCGGCGCAGCCTGTGCCATGCACCGCGTTTGATTCTTCTCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGAT                                                                                                       <  8:116583/148‑1                                               ACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGAT                                                                                                       <  2:54240/148‑1                                                       AGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGA                                                                                               <  4:160986/148‑1                                                            GTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCA                                                                                          <  8:838/148‑1                                                                 ATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCT                                                                                     >  7:63891/1‑148                                                                 ATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCT                                                                                     >  8:108972/1‑148                                                                      CCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACT                                                                                <  8:63891/148‑1                                                                            TGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATC                                                                          <  5:104737/148‑1                                                                                 TCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCTCAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGAT                                                                     >  5:47090/1‑148                                                                                   TTCGCGGGCACGCCCGCTCCCCCAGGGTCCCTGCTAAATCAGTAAGTGCTGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCCCAGCCACCAGGCTGCGCAAGACGTCAGATCTGCCCTGCCATCGAGAT                                                                     >  8:93988/1‑146                                                                                   TTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGCGATCCCCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGAT                                                                     >  8:133615/1‑146                                                                                       CGGGCAGGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCTGCACTTCGGGGCTGCGCTGTCGCACAGCAAACAGGATGCTCATGACGTCAGATCTGCACTGACATCGAGATCTAGA                                                                <  3:20769/147‑1                                                                                          GCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAG                                                            <  6:96551/148‑1                                                                                          GCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAA                                                             >  2:141102/1‑147                                                                                           CACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGC                                                           <  1:96273/148‑1                                                                                               CCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATTACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTC                                                       <  8:180960/148‑1                                                                                                        ACAGGGTCCCTGCTAAATCAATAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGA                                              >  8:52687/1‑148                                                                                                                 CTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTA                                      <  6:24684/147‑1                                                                                                                  TGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGG                                    >  2:116938/1‑148                                                                                                                     TAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCA                                 <  1:135975/148‑1                                                                                                                     TAAATCAGTAAGTGATGCGCAGTTATATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGT                                   <  4:32176/146‑1                                                                                                                                          GTTCTATTAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATG            <  3:143386/148‑1                                                                                                                                               ATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATG            <  4:576/143‑1                                                                                                                                               ATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGA                                                                        <  1:135473/83‑1                                                                                                                                                TGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCC      <  5:99280/148‑1                                                                                                                                                TGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCC       >  8:115123/1‑147                                                                                                                                                TGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCC       >  5:177524/1‑147                                                                                                                                                 GAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCC       <  3:84415/146‑1                                                                                                                                                 GAGAGATCACCCAGCCATTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCA     >  4:148498/1‑148                                                                                                                                                   GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT   >  5:43510/1‑148                                                                                                                                                   GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT   <  5:1762/148‑1                                                                                                                                                   GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT   >  8:47500/1‑148                                                                                                                                                   GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT   >  4:5850/1‑148                                                                                                                                                    AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGCCGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAATG  >  3:140595/1‑148                                                                                                                                                    AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAATG  <  4:117719/148‑1                                                                                                                                                    AGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGT          >  2:157778/1‑140                                                                                                                                                     GATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTT         <  1:157778/140‑1                                                                                                                                                                                                                                                                                                         ATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2301601‑2301453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAATG  >  NC_002947/2925429‑2925574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.