| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 5,476,595 | (GCT)3→2 | coding (825‑827/1317 nt) | PP_4813 → | PAP2 family protein/DedA family protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 5476587 | 5476589 | 3 | 31 [0] | [0] 31 | PP_4813 | PAP2 family protein/DedA family protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5476590 = | 0 (0.000) | 29 (0.850) | 29/272 | 0.3 | 100% | coding (820/1317 nt) | PP_4813 | PAP2 family protein/DedA family protein |
| ? | NC_002947 | = 5476586 | 0 (0.000) | coding (816/1317 nt) | PP_4813 | PAP2 family protein/DedA family protein | |||||
GCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5476743‑5476590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagcagGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAGGGCCAGCC < NC_002947/5476586‑5476440 GCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAA > 7:35605/1‑147 CCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAA > 1:80453/1‑146 CCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGC < 3:101593/147‑1 CATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCG < 1:49113/148‑1 TGCTGTAGCTGGTCAGGGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGT < 6:54390/148‑1 GCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGG > 7:145388/1‑146 GTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGA > 6:168769/1‑147 TCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTG < 1:194426/148‑1 AGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGG > 7:179667/1‑148 TTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCG > 7:18748/1‑130 TCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGA < 8:18748/130‑1 GCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATC > 2:42068/1‑148 GCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATC < 2:66036/148‑1 CCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTA < 2:80453/147‑1 AAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTC > 2:44017/1‑148 GCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCA > 4:54489/1‑147 TTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGCGTCACCAGCACCA < 1:42068/148‑1 TGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCC > 7:179122/1‑148 GCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATG < 2:178391/147‑1 GATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCG > 2:123950/1‑142 ATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCT < 8:113189/148‑1 ATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGA < 1:123950/142‑1 TCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGCTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTG > 2:79214/1‑148 GTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGC < 1:193330/148‑1 ATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCT > 5:13080/1‑148 AAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAGGCCCGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCA > 8:120309/1‑148 GTGTCGCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTG < 8:135957/147‑1 GCCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAA > 8:36902/1‑148 CCACTGACGGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAA < 6:20085/147‑1 GGGCAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAA > 7:5396/1‑148 CAAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTA < 8:170944/148‑1 AAGCAGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAG < 1:98935/148‑1 AGCAGGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAGGG > 4:82799/1‑146 GGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAGGGCCCGCC > 5:4879/1‑148 GCCCGCTGGGCATGCTGTAGCTGGTCAGTGGGTCGGTCAGTACTTCCGGCCTGGCCCGGGCAAATAGCCATTTCAGTGTGCCGTTGGCGATCGCCGTGCCCATCAACGCGCCCGCCGCGAAAAATGCGTGTCGCCACTGACGGGCAAGCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5476743‑5476590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcagcagGCCGGTCAGCAGGGCGCCGAGGAACAACTGGGTGCGGAAATCGCCTAGCCGTGTCACCAGCACCACGGTGCCGTCGATGGCCTGGCTGCGATGCTCCTGGACCAGTGTCATCACGCCTTGGTCGAACTCATGGAAGTAGGGCCAGCC < NC_002947/5476586‑5476440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |