Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	1,795,447	T→C	L87P (CTG→CCG)	PP_1600 →	Skp‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,795,447	0	T	C	100.0%	133.7 / NA	39	L87P (CTG→CCG)	PP_1600	Skp‑like protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (16/23);  total (16/23)

GCCGCCAAGAAGTATGCGGTTGATGCCGAGAAGAAATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCTGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCTGTCGAGGAAGTGATCAAGAAGG  >  NC_002947/1795302‑1795590                                                                                                                                                  |                                                                                                                                                gccgccAAGAAGTATGCGGTTGATGCGGAGAAGATATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCATGGGCATCCAGGACCGCCTGATCAAGGTCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCgg                                                                                                                                               <  2:207760/148‑1 (MQ=255)   cgccAAGAAGTATGCGGTTGATGCCGAGAAGAAATTCGGGCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAg                                                                                                                                             <  3:34389/148‑1 (MQ=255)        agaagTATGCGGTTGATGCCGAGAAGAAATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGa                                                                                                                                        <  5:195923/148‑1 (MQ=255)        agaagTATGCGGTTGATGCCGAGAAGAAATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGa                                                                                                                                        <  2:133630/148‑1 (MQ=255)              aTGCGGTTGATGCCGAGAAGAAATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCaa                                                                                                                                  <  6:25621/148‑1 (MQ=255)               tGCGGTTGATGACGAGAAGAAATTCGGTCCGCATCTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGGGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCaa                                                                                                                                  <  6:55185/147‑1 (MQ=255)                     tGATGCCGAGAAGAAATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGCGCGCCCGGAGCTCGAGTTCAAGCAAAAg                                                                                                                           >  8:137210/1‑148 (MQ=255)                        tGCCGAGAAGAAATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGcc                                                                                                                        >  3:55821/1‑148 (MQ=255)                         gCCGAGAAGAAATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGccc                                                                                                                       <  1:46131/148‑1 (MQ=255)                            gagaAGAAATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCcgcg                                                                                                                    >  1:57994/1‑148 (MQ=255)                               aagaaATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGAtt                                                                                                                 <  5:150138/148‑1 (MQ=255)                                 gaaATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGAttt                                                                                                                >  2:65908/1‑147 (MQ=255)                                 gaaATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATttc                                                                                                               <  8:177999/148‑1 (MQ=255)                                         gTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACCAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATttccagttcca                                                                                                       >  6:137884/1‑148 (MQ=255)                                         gTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATttccagttcca                                                                                                       <  7:177763/148‑1 (MQ=255)                                               aaCTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCaa                                                                                                 <  1:162650/148‑1 (MQ=255)                                                  tGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGa                                                                                              >  8:7452/1‑148 (MQ=255)                                                      cAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACt                                                                                           >  1:163506/1‑147 (MQ=255)                                                          cTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAAc                                                                                       >  5:22354/1‑147 (MQ=255)                                                                         aGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTg                                                                       <  7:129811/148‑1 (MQ=255)                                                                                             ggACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAg                                                   <  3:140757/148‑1 (MQ=255)                                                                                                ccGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCaa                                                >  5:12880/1‑148 (MQ=255)                                                                                                    cTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTg                                                                       >  5:171299/1‑121 (MQ=255)                                                                                                     tGATCAAGGGCGGCGACTAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGc                                                                      <  6:171299/121‑1 (MQ=255)                                                                                                            gggCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCTTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAg                                    <  6:43220/148‑1 (MQ=255)                                                                                                            gggCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAg                                    >  2:203428/1‑148 (MQ=255)                                                                                                             ggcggcGACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGc                                   >  8:42033/1‑148 (MQ=255)                                                                                                                   gACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATg                             <  7:42033/148‑1 (MQ=255)                                                                                                                   gACAAGATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATg                             <  1:65908/148‑1 (MQ=255)                                                                                                                        gATGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCt                        >  5:50084/1‑148 (MQ=255)                                                                                                                         aTGCAGCAGCAGGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCTGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCTg                       >  8:97618/1‑148 (MQ=255)                                                                                                                             agcagcagGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTTAAGCCGAAGCTGGATGGTGCTGTCGa                   <  4:55821/148‑1 (MQ=255)                                                                                                                             agcagcagGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCTGTCGa                   <  3:88301/148‑1 (MQ=255)                                                                                                                                  cagGAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCTGTCGAGGAAg              <  1:26822/148‑1 (MQ=255)                                                                                                                                     gAGCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCTGTCGAGGAAGTGa           >  2:176696/1‑148 (MQ=255)                                                                                                                                       gCGTGAGCGCCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCTGTCGAGGAAGTGAt          >  4:90978/1‑147 (MQ=255)                                                                                                                                            aGCGCCCGGAGCGCGAGATCAAGCACAAGGCCCGCGATTACCAGTTCCAGTCCAAGGAACTGAACGCAGCCAAGGCCGCTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCTGTCGAGGAAGTGATCaagaa    <  6:18371/148‑1 (MQ=255)                                                                                                                                             gcgcCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCTGTCGAGGAAGTGATCaagaa    <  5:137884/147‑1 (MQ=255)                                                                                                                                              cgcCCGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGGCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCGCAAGCAACTGAAGCCGAAGCTGGATGGTGCTGTCGAGGAAGTGATCAAGAAgg  <  8:157834/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                GCCGCCAAGAAGTATGCGGTTGATGCCGAGAAGAAATTCGGTCCGCAACTGACCAAGCTGAAAAGCCTGGAAAGCAGTGCCAAGGGCATCCAGGACCGCCTGATCAAGGGCGGCGACAAGATGCAGCAGCAGGAGCGTGAGCGCCTGGAGCTCGAGTTCAAGCAAAAGGCCCGCGATTTCCAGTTCCAGTCCAAGGAACTGAACGAAGCCAAGGCCGTTGCTGATCGCGACATGCTCAAGCAACTGAAGCCGAAGCTGGATGGTGCTGTCGAGGAAGTGATCAAGAAGG  >  NC_002947/1795302‑1795590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑