Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 336,125 +T coding (210/237 nt) PP_0278 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947336,1241.T100.0% 163.2 / NA 49D70V (GAT→GTT) PP_0278hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base T (25/24);  total (25/24)

TTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATT  >  NC_002947/335977‑336267
                                                                                                                                                    |                                                                                                                                                
ttAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑t                                                                                                                                                 >  5:164858/1‑149 (MQ=255)
      cATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCtg                                                                                                                                            >  2:279445/1‑149 (MQ=255)
       aTCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCtgt                                                                                                                                           >  1:252862/1‑149 (MQ=255)
            tCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGa                                                                                                                                       >  5:269842/1‑148 (MQ=255)
                   ccTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACCT‑GGcc                                                                                                                               >  7:323867/1‑148 (MQ=255)
                   ccTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACACCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCtgt                                                                                                                                           <  8:270042/137‑1 (MQ=255)
                   ccTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACACCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCtgt                                                                                                                                           >  7:270042/1‑137 (MQ=255)
                       cgcgTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGATGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAg                                                                                                                            <  6:269842/147‑1 (MQ=255)
                        gcgTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGgcg                                                                                                                         <  1:335085/149‑1 (MQ=255)
                           tAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCt                                                                                                                       >  6:26918/1‑148 (MQ=255)
                             gagCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCtga                                                                                                                     <  5:26918/148‑1 (MQ=255)
                               gCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCtgatga                                                                                                                  <  2:252862/149‑1 (MQ=255)
                                          ccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATc                                                                                                          >  6:106334/1‑146 (MQ=255)
                                                aCGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGcc                                                                                                 <  3:275041/149‑1 (MQ=255)
                                                             gCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATCGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGgcg                                                                                     <  1:279445/149‑1 (MQ=255)
                                                                tGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCAtt                                                                                 <  6:164858/149‑1 (MQ=255)
                                                                 gTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCAt                                                                                  >  8:15067/1‑147 (MQ=255)
                                                                    tcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAgg                                                                              >  2:314314/1‑148 (MQ=255)
                                                                      gATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCAt                                                                           >  7:163220/1‑149 (MQ=255)
                                                                           tGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAcg                                                                      >  2:74971/1‑149 (MQ=255)
                                                                                 gCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCa                                                                <  1:314314/149‑1 (MQ=255)
                                                                                   tACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAtt                                                              >  6:208447/1‑149 (MQ=255)
                                                                                       tCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATACCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGATGATGAAAGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACTCGGTCATTtgtg                                                          >  3:79310/1‑149 (MQ=255)
                                                                                          aGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTgg                                                         >  1:367600/1‑147 (MQ=255)
                                                                                                  gTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCtt                                               <  2:367600/149‑1 (MQ=255)
                                                                                                                  tGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCt                               <  6:198661/149‑1 (MQ=255)
                                                                                                                   ggaggaCGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGaa                                                                                                                 <  7:129879/66‑1 (MQ=255)
                                                                                                                   ggaggaCGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGaa                                                                                                                 >  8:129879/1‑66 (MQ=255)
                                                                                                                    gaggaCGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTg                              >  6:290991/1‑148 (MQ=255)
                                                                                                                        acgacCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAag                         <  8:163220/149‑1 (MQ=255)
                                                                                                                         cgacCATAACTTCCTGGGGGCACCCCATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCACGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAagc                        <  8:323867/149‑1 (MQ=255)
                                                                                                                         cgacCATAAATTCCTGGGGGCCGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAagc                        <  5:106334/149‑1 (MQ=255)
                                                                                                                          gacCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCtt                                               >  4:49730/1‑125 (MQ=255)
                                                                                                                          gacCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCtt                                               <  3:49730/125‑1 (MQ=255)
                                                                                                                            ccATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAg                                                                               >  7:208836/1‑91 (MQ=255)
                                                                                                                            ccATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAg                                                                               <  8:208836/91‑1 (MQ=255)
                                                                                                                            ccATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAagcagc                     >  1:12855/1‑149 (MQ=255)
                                                                                                                             cATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGcc                    >  6:27842/1‑149 (MQ=255)
                                                                                                                                 aaTTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCgg                <  2:12855/149‑1 (MQ=255)
                                                                                                                                  aTTCCTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCTTTGCAGcccattc               <  5:208447/149‑5 (MQ=39)
                                                                                                                                      cTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTgg                                                         >  3:194809/1‑103 (MQ=255)
                                                                                                                                      cTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTgg                                                         <  4:194809/103‑1 (MQ=255)
                                                                                                                                      cTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcgc                                        >  6:233362/1‑120 (MQ=255)
                                                                                                                                      cTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcgc                                        <  5:233362/120‑1 (MQ=255)
                                                                                                                                      cTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCaa                           <  3:134886/133‑1 (MQ=255)
                                                                                                                                      cTGGGGGCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCaa                           >  4:134886/1‑133 (MQ=255)
                                                                                                                                           ggCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCaga      <  5:290991/149‑1 (MQ=255)
                                                                                                                                           ggCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCa        >  5:6247/1‑147 (MQ=255)
                                                                                                                                           ggCAGCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCATGCGTCGCGAATGGGCTGCAAAGAAGCCCCGGCGATTTCagt      >  7:352604/1‑148 (MQ=255)
                                                                                                                                               gCCGATTACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGAtt  <  4:173231/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
TTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACAT‑GGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGATT  >  NC_002947/335977‑336267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑