New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1297198 =	NA (NA)	10 (0.160)	9/264	6.4	NA	coding (386/1329 nt)	PP_1133	transposase
	?	NC_002947	1297218 =	NA (NA)					coding (406/1329 nt)	PP_1133	transposase
Rejected: Coverage evenness skew score above cutoff.

TCTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1297350‑1297198 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaTTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCT  >  NC_002947/1297218‑1297365                                                                                                                                                                                                                                                                                                               TCTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAG                                                                                                                                                          >  6:359073/1‑149  CTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGG                                                                                                                                                         >  1:229130/1‑149  CTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGG                                                                                                                                                         >  7:187052/1‑149   TTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGT                                                                                                                                                        >  1:112694/1‑149   TTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGT                                                                                                                                                        >  2:181169/1‑149   TTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGT                                                                                                                                                        <  3:102749/149‑1   TTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGT                                                                                                                                                        >  4:359848/1‑149     CATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTC                                                                                                                                                       <  1:189761/148‑1     CATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTC                                                                                                                                                       <  6:175752/148‑1     CATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAG                                                                                                                                                          <  8:141085/145‑1      ATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA                                                                                                                                                      <  8:367248/148‑1      ATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA                                                                                                                                                      <  4:77983/148‑1        GCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGT                                                                                                                                                        >  5:397173/1‑144        GCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGT                                                                                                                                                        >  8:194794/1‑144              TACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGT                                                                                                                                                        >  3:108038/1‑138              TACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGT                                                                                                                                                        <  4:108038/138‑1                               TGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTC                                                                                                                                                       <  5:108707/122‑1                               TGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTC                                                                                                                                                       >  6:108707/1‑122                                                     GTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA                                                                                                                                                      <  4:201251/101‑1                                                     GTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA                                                                                                                                                      >  3:201251/1‑101                                                                                                                       ACGCTGCCTGACCAATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCC                                    >  8:232048/1‑149                                                                                                                               TGACCAATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATG                                                                                 <  6:373114/96‑1                                                                                                                               TGACCAATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATG                                                                                 >  5:373114/1‑96                                                                                                                                GACCAATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATCTCCGGTGTAACT                           >  7:211351/1‑149                                                                                                                                  CCAATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCAGGTGTAACTGG                         >  7:102778/1‑149                                                                                                                                   CAATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGACCATGAGCCAAATGAACATCCAGCTGGCCAATGTCAT                                                 >  8:99528/1‑124                                                                                                                                   CAATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGACCATGAGCCAAATGAACATCCAGCTGGCCAATGTCAT                                                 <  7:99528/124‑1                                                                                                                                     ATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCAT                      >  5:226881/1‑149                                                                                                                                     ATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGAT                                          <  5:342915/129‑1                                                                                                                                     ATGACCGGACGCAGCAGGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGAT                                          >  6:342915/1‑129                                                                                                                                                     GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCC      <  2:78453/149‑1                                                                                                                                                     GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCC      <  5:234375/149‑1                                                                                                                                                     GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGC       >  8:234182/1‑148                                                                                                                                                     GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTG            <  7:353257/143‑1                                                                                                                                                     GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTG            >  8:353257/1‑143                                                                                                                                                     GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAG                                              <  4:239995/109‑1                                                                                                                                                     GGTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAG                                              >  3:239995/1‑109                                                                                                                                                     GGTCATTGGTCAGGCAGCGTGCTTCAAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGC       >  4:187051/1‑148                                                                                                                                                      GTCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCA     >  5:299041/1‑149                                                                                                                                                       TCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCG                                   <  8:69521/118‑1                                                                                                                                                       TCATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCG                                   >  7:69521/1‑118                                                                                                                                                        CATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCG                                   >  2:297815/1‑117                                                                                                                                                        CATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCG                                   <  1:297815/117‑1                                                                                                                                                        CATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCA                                               >  6:27976/1‑105                                                                                                                                                        CATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCA                                               <  5:27976/105‑1                                                                                                                                                         ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCT  <  1:362037/149‑1                                                                                                                                                         ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCT  <  1:36074/149‑1                                                                                                                                                         ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCAT                                                 >  5:348080/1‑102                                                                                                                                                         ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCAT                                                 <  6:348080/102‑1                                                                                                                                                         ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGA                                                                       >  2:206642/1‑80                                                                                                                                                         ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGA                                                                                >  2:19365/1‑71                                                                                                                                                         ATTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGA                                                                                <  1:19365/71‑1                                                                                                                                                                                                                                                                                                               TCTTCATGCCAGTTACACCGGAAATATCACTGATGACATTGGCCAGCTGGATGTTCATTTGGCTCATGGCCTTTTGCATCCGGTTCAGCGTCTGCGCCTGGTCTTTCACTTTGGAAGCACGCTGCCTGACCAATGACCGGACGCAGCAGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1297350‑1297198 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaTTGGTCAGGCAGCGTGCTTCCAAAGTGAAAGACCAGGCGCAGACGCTGAACCGGATGCAAAAGGCCATGAGCCAAATGAACATCCAGCTGGCCAATGTCATCAGTGATATTTCCGGTGTAACTGGCATGAAGATTTTGCGGGCCATCT  >  NC_002947/1297218‑1297365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.